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LOCUS XM_070219276 5047 bp mRNA linear INV 09-DEC-2024 variant X2, mRNA. ACCESSION XM_070219276 VERSION XM_070219276.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5047 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5047 /gene="hwt" /note="heavyweight; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108062959" CDS 79..2817 /gene="hwt" /codon_start=1 /product="pneumococcal serine-rich repeat protein isoform X2" /protein_id="XP_070075377.1" /db_xref="GeneID:108062959" /translation="MPPHRLLGPAAVCGACITSAPASSSLAGGRGSEPGDDLEEEYFR PRSIFYVHPHGVHECAECAQPAQPTIATATANQPSTLSNPSLDLYDDDEDEVDGDEDE EDDSEDIMGSRRRQIYETAFDCKIAKSDDDLDEVDRITNCSVLLQLSNGNGSGTSDIG KATTGSSKTRAECKRAKNSKNQALQEQTGEAHVQVHQVQAELGKLQLISQVDQQNQNQ QQQQQQQPPSQGQQLQLGATAGSGVSASSTQQLPVRGYTPSPPSTAPLPMKFPGKHER YLNMNSIRSAPNLPAANPAHPRLRDLRLPIQSMRNQCGGGGGGGSSNDNSLTDSAYVN PPSTNSNSNAASGSASASVSATGSAAAVRRPRSFVLESGRVLELRRSAQGGHHHHHQQ SGGGGGGQSSHHHHHHHHHGGGAGSRSRNRQAQGQTAGGGGHNYSSTESIATSSSGGS MESLRSSTSEGNRSTSSSESRHSSSLSSHSSESGSGGSGGSSVAYPLRPAPLLLHSKL HILSPISDKSSQEPASASASEQSQQPSQAPMAAQEEDSSAAPPGSAVQVTNPTSASMK QRSNRGSGAPNKALLQLADELLGSDSGISLHSREEGKPQALALQRLTLPKLQLIGAEG NTITTTTTTTNTSSSGAGNSAGAGGSGATASGSAGLPQDLRDLPFDMPKLRRRKTLQQ EAACTSGSATSVDLGELPFDMPKLRRRLRANQAEINNLLMHSTESSGISQASSSHSMR DDQKLASKLDTALFRQNLTLNLNDSRQASKQFGSLDLRGLNSNKELNMNLSQGYVTAV DLIDVTIPLERQGWYHGAITRVEAETTLRPLSEGSFLVRNCESTKQDYSLSLKGAKGF MHMRIQRNETGQYILGQFSRPFETVPEMIRHFCLNRLPVRGAEHMCLIEPVIAQLL" misc_feature 2506..2799 /gene="hwt" /note="Src homology 2 domain found in SH2 domain-containing adapter proteins B, D, E, and F (SHB, SHD, SHE, SHF); Region: SH2_SHB_SHD_SHE_SHF_like; cd09945" /db_xref="CDD:198198" misc_feature order(2533..2535,2587..2589,2650..2652,2656..2658) /gene="hwt" /note="phosphotyrosine binding pocket [polypeptide binding]; other site" /db_xref="CDD:198198" misc_feature order(2653..2655,2740..2742) /gene="hwt" /note="hydrophobic binding pocket [polypeptide binding]; other site" /db_xref="CDD:198198" ORIGIN 1 aacagttacg gtccctgatt ttataatctt caattgttca gataaataaa ctacttttag 61 tcggcccagg tccagccgat gccaccgcac cgcctgctgg gaccagcagc cgtgtgcgga 121 gcctgcatca catccgctcc tgcctcctcc tccttggccg gcggacgggg cagcgagccc 181 ggcgatgatt tggaggagga gtacttccgg ccgcgcagca tcttctatgt gcatccgcat 241 ggcgtccacg agtgcgccga gtgcgcccag ccagcccagc caacgattgc gactgcgact 301 gccaatcaac cgtcgacgct gagcaatcca tcgctcgatc tctacgacga cgacgaggac 361 gaggtggacg gcgacgagga cgaagaggac gactccgagg acatcatggg cagccggcgg 421 cgtcagatct acgagacggc tttcgactgc aagatagcca agtcggatga cgatctggac 481 gaggtggatc gcatcaccaa ctgctcggtg ctgctccagc tgagcaacgg caatgggagc 541 ggcactagtg acatcggcaa ggcaaccacc ggctcctcca agacgcgggc ggagtgcaag 601 cgggccaaga actcgaagaa ccaggctctg caggagcaga cgggcgaggc ccatgtccag 661 gtgcaccagg tgcaggcgga gctgggcaag ctgcagctga tcagccaggt ggaccagcag 721 aatcagaatc agcagcagca gcagcagcag cagccgccaa gccagggaca gcagctgcag 781 cttggagcca ccgccggaag tggagtaagt gcgtccagca cccagcagct gcccgtgcgc 841 ggctacaccc cgtcgccccc ctcgacggcg ccgctgccga tgaagtttcc cggcaagcac 901 gagcgctacc tgaacatgaa cagcatccgc agtgcgccca atctgcccgc cgccaatcca 961 gcgcatccgc gtctccggga tctccgcctg cccatccagt cgatgcggaa tcagtgtggc 1021 ggtggcggcg gtggcgggag tagcaacgac aacagtctca ccgacagcgc ctacgtgaat 1081 ccgccctcga ccaactcgaa ctcgaatgcg gcctccggat ccgcttcggc ctccgtttcg 1141 gcgacaggat cggcggcagc tgtacgccgt ccccgatcct ttgtcctgga atcgggccga 1201 gtgctcgagc tgcgtcgcag tgcccagggt ggtcatcatc accatcatca gcagtcgggc 1261 ggcggtggcg gcggtcagtc gtcgcaccat caccatcatc atcatcacca tggcggcggc 1321 gccggaagtc gaagcaggaa tcgccaggcc cagggacaaa cggccggcgg cggaggtcac 1381 aactacagca gcaccgagag catcgccacc tcgagcagcg gcggcagcat ggagtcgctg 1441 cgttccagca ccagcgaggg caaccgcagc acctccagct ccgagtcgcg tcactccagc 1501 tcgctgagtt cgcacagctc ggaaagtggt agcggtggca gcggtggctc cagcgtggcc 1561 tatcccctgc gtccggctcc cctgctgctg cactcgaagc tgcacatcct cagtcccatt 1621 tccgacaagt cctcgcagga accggcctcg gcgagtgcct cggagcagtc acagcagccg 1681 tcccaggctc ccatggcggc gcaggaggag gattccagtg cggccccgcc aggcagcgcc 1741 gtccaggtga ctaatcccac ctccgcctcc atgaagcaga gaagcaatcg cggcagtggt 1801 gcccccaaca aggccctcct ccagctggcc gacgagctct tgggctcgga cagtgggata 1861 tcgctgcatt cgcgcgagga gggcaaaccg caggccctgg ccctgcagcg tttgacgctg 1921 cccaagctgc agctaatcgg agccgaggga aacaccatca ccaccaccac caccaccacg 1981 aacacctcct cctcgggggc tgggaattcg gcaggggctg gaggctctgg agccactgcc 2041 tctggctcgg ctggcctgcc gcaggatctg cgggatctgc ccttcgatat gcccaagctg 2101 aggcgccgca agacgctgca gcaggaggcc gcctgcacct cgggcagtgc cacgtccgtg 2161 gatctcggcg agctgccctt cgacatgccc aagctgcggc ggcgcctgcg ggccaaccag 2221 gcggagatca acaacctgct gatgcacagc accgagtcca gcggcatctc gcaggcctcc 2281 tccagccact cgatgcgcga cgatcagaag ttggccagca agttggatac ggcactcttc 2341 cggcaaaacc tcaccctcaa cctgaacgat tcgcggcagg cgagcaagca gttcggcagc 2401 ctggatctgc ggggactcaa cagcaacaag gagctgaaca tgaacctcag ccagggatat 2461 gtcaccgccg tggacttgat cgatgtcacc attccactgg agcggcaggg ttggtaccat 2521 ggcgccatta cgcgagtcga ggcggagacc acgctgcgtc cgctgtccga gggatccttt 2581 ctggtgcgca actgcgagtc gaccaagcag gattactcgc tttccctcaa gggcgccaag 2641 ggcttcatgc acatgcgaat ccagcgcaac gagaccggcc agtatatcct gggccagttc 2701 agccgtccct tcgagacggt tcccgagatg atccggcact tttgcctcaa ccggctgcca 2761 gttcgcggtg ccgagcacat gtgtctgatc gagccggtca tcgcccagct gctctagagg 2821 aattcgagga ttcaggagga ggaaccaaac caaacagaat tacatattaa tagcctgtag 2881 aggacttagg aacctatgtg aacatgtgta tgcactagtt atatacgcga tagtttgtaa 2941 accgaagatg gcaatttttt catgtttttt tttgtttttg tttgtggcct cgaattttgt 3001 atgtcggtct actagcaaac gagcaaagaa aaaaagaata cacccactca ctcacgacac 3061 acgaactagt ttagcgttta aagtacgtag cacattcaga caataccagc aaattacaaa 3121 aaacaaaaca aaaaaccaaa aaccaaacaa acgatattta tatagaaggc atatatacaa 3181 aagcaagacg atatatacaa gcaaatatat atatggataa aggatagcaa gagcacttga 3241 agacagttgc taaaacgtag tacgtacacg acccgaaaac ggatatatgt agccggaaac 3301 cagaaaccag atggtacaga tgatacaggt gcaggagcag cgttttttag atgtgtttac 3361 accgaaccga gcagaagatg aggagcaact atatgagaaa cccttccgtt tggataaaga 3421 tttacggtag aacacaccca ctcacacaca catagcgatt gtatggtcga aacttatgca 3481 aatttccgta gcacactcac agaaacactc gcccactagc atcgtccgat tattcagata 3541 cccaaaacca ttatttgtca gctagtgggc atcgcttagg gcaccacgtt tacactaaga 3601 aaagttttag caagcaactc taaaaatttg ttgattaatt ttatgttacc aaaacaatga 3661 aaaagaaaga aaaaaacaaa ctcttaaata tgtatatcta tataaaaatg agaactaact 3721 ttagcaagca gcgatgtcat tttttttgtc ttagctgtag gtcaggagta cgcgaagtag 3781 aacgctcaaa gcgcttttgg ttaaaggatc gaatcgaatc ggatcgaatc agatagaata 3841 ggataggatg gaggatcgat cggaatgaat ggatggatgg atggggggag aggaggaggc 3901 aaggatatag caacgcatat gaaatgttgg tttaagtgtt agtttctaat tgacgggcga 3961 cggcgagcga acgaagggca aatataatat atatatatat attatgaatg ctaacaaatg 4021 atatatactt actatttata tttctatata tacaatctat atatatatat acacgatatt 4081 aaagagcagt caatggtttt ttggttccag ttccaagaga gagaggcaaa tgtcaggcag 4141 agaggcaggc aggatgctaa ttaactaatt attgtttctg gcagttttct gttccacctt 4201 cgtaccgccg agcaatacaa ctgatttcca ggacccagag tatctcaccc agagttatgt 4261 ttatatatgt gtgtgccaaa gtattattct agtcatatgt atgtgaatat caccgcgtta 4321 tattattttc gatatgttga ttgttgccta atttctaata ctcaagcaat ccgatgcagt 4381 gcaatatgcg aatatacgtt tatatctcgg ttatatcggt tatgtatcta tgatttgtga 4441 ccaatttagc tataagttaa tcgcctgatt tgtccatagt taagcgaaga gctgcgccag 4501 tttgtaaacg gcttttgtaa atatacagaa tataaatacg acacgacaca tgatatgata 4561 tgatgtatac aagacgatat gattttattt gcaatacaac ttttaagcta agatttcaac 4621 ttcacataga aaccgcaaat ccacatacat aaacgacgta catagcaatg tattttgagg 4681 cttccgtagc agtaaagaaa aaccaaccaa ccaaaccaaa ccgaactacc aacaaatcaa 4741 ccaaaattcc aagataatcg cagcactcgg gcaccgttta cactttgcaa tcgaagaggt 4801 cgtagtgcaa attcgctgag tgtcgatcgc ttccgttttg ttgtgtataa aaaagaaaag 4861 gaaagtactt ttaggtctgt ggacgatgaa cgatgaacga cgaacaaccg gcttactcta 4921 accgaacctt gtactccaac tagaggcgct ctctatctac ggcaccctaa tatctgatta 4981 attcaattag tacagagcga atacgtaaca agaaattaac aaacagaaac cgtaacaaca 5041 aaagaaa