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LOCUS XM_070219266 7013 bp mRNA linear INV 09-DEC-2024 (Adar), transcript variant X13, mRNA. ACCESSION XM_070219266 VERSION XM_070219266.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7013 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7013 /gene="Adar" /note="Adenosine deaminase acting on RNA; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:108063839" CDS 33..2090 /gene="Adar" /codon_start=1 /product="double-stranded RNA-specific editase Adar isoform X6" /protein_id="XP_070075367.1" /db_xref="GeneID:108063839" /translation="MYPVSYKPGYKSCYSYRSCHHAMRIARSSICYQRQHFYAASSYA GKRSRLFVKRRIMLPSLPCNPVSAPSDINMNGYNRKSPQKRRYEMPKYAVSPKKKTCK ERIPQPKNTVAMLNELRHGLIYKLESQTGPVHAPLFTISVEVDGQKYLGQGRSKKVAR IEAAATALRSFIQFKDGAVLSPLKPSGNLDFTSDEHLENDVSKSAITVDGQKKVPDKG PVMLLYELFNDVNFECINIDGAQNNCRFKMTVTINEKKFDGTGPSKKLAKNAAAKAAL ASLCNISYSPMVVPQKNVPLPIDDKSSSMELPQIHADTIGRLVLEKFMEVIKGQEAYS RRKVLAGIVMTENMNFCEAKVISVSTGTKCVSGEHMSVNGAVLNDSHAEIVSRRCLLK FLYAQLDLQCNQATAYQSIFVRNTDGQYPYKLKSGVHFHLYINTAPCGDARIFSPHEN DTGVDKHPNRKARGQLRTKIESGEGTIPVKSSDGIQTWDGVLQGQRLLTMSCSDKIAR WNIVGIQGSLLSSIIEPVYLHSIVLGSLLHPEHMYRAVCGRIEKSIQGLPPPYHLNKP RLALVTSAEPRNQAKAPNFGINWTIGDTELEVVNSLTGRTIGGQVSRITKQAFFVKYG FLMTNLPGILVRKVTTDYGQTKANVKDYQIAKLELFSAFKREDLGSWLKKPIEQDEFG LAE" misc_feature 357..545 /gene="Adar" /note="first double-stranded RNA binding motif of STRBP, ILF3, RED1, RED2 and similar proteins; Region: DSRM_STRBP_RED-like_rpt1; cd19865" /db_xref="CDD:380694" misc_feature order(357..359,366..371,378..383,387..389,429..434, 438..440,444..446,495..503,510..512) /gene="Adar" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:380694" misc_feature 681..>821 /gene="Adar" /note="double-stranded RNA binding motif (DSRM) superfamily; Region: DSRM_SF; cl00054" /db_xref="CDD:444671" misc_feature 960..2075 /gene="Adar" /note="tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase); Region: ADEAMc; smart00552" /db_xref="CDD:214718" polyA_site 7013 /gene="Adar" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tctagtggga atagtgagga atcggacccg caatgtatcc agtgtcctat aaaccaggct 61 acaagtcgtg ctatagctat agatcctgtc accatgccat gcgtatagcg aggtcttcca 121 tttgttatca acggcagcac ttttatgccg cctcaagtta tgcgggcaaa aggtcgcggc 181 tgtttgttaa gcggcgaatt atgcttccct cattgccttg caatccggtg agtgcaccat 241 ctgatatcaa catgaacgga tataaccgga agtcgcctca aaaacggcgc tatgagatgc 301 caaaatatgc tgtatcacca aaaaagaaaa cctgcaagga gcgcattccg cagccaaaga 361 atacggtggc aatgctgaat gagttaagac atggactgat ttacaaattg gagtcacaga 421 ctggtccggt gcacgcacct ttatttacga tatccgttga ggtcgatgga cagaaatact 481 tgggccaggg tcgcagtaaa aaagttgcac gcatcgaggc agctgccaca gcactgcgaa 541 gctttataca attcaaggac ggagccgtct tgtcgccatt gaagccatcg ggcaacttgg 601 actttaccag cgatgaacat ctagaaaatg atgtcagcaa gagtgccatc actgttgacg 661 gtcaaaagaa ggttccggac aagggtcccg taatgctgct ctacgaattg ttcaacgatg 721 ttaattttga atgcattaat attgacggag ctcaaaacaa ttgtcgcttc aagatgaccg 781 tcacgattaa cgaaaagaag ttcgatggaa caggtccttc caaaaagctg gcgaaaaatg 841 ctgcggccaa agcggcactt gcctcgttgt gcaacatttc ctacagtcca atggtggtgc 901 cacaaaagaa cgtacccctt ccaatcgacg acaagtcgtc atccatggag ttgccgcaga 961 tacatgccga tacgattgga cgcctggttt tggagaagtt catggaagta atcaagggcc 1021 aggaggccta ctcgcgtcga aaggtattgg cgggcattgt tatgactgaa aacatgaatt 1081 tttgtgaagc caaagttatt tcagtctcga cgggcaccaa gtgtgtcagc ggcgagcata 1141 tgagtgtgaa cggagctgtc ctgaacgatt cccatgccga aatagtgtct aggcgttgtc 1201 tcctcaagtt cttgtatgca cagctggatc ttcagtgcaa tcaggccaca gcatatcagt 1261 cgattttcgt gaggaatact gatgggcaat acccttataa actaaaatcc ggggtacatt 1321 tccatttgta tataaataca gcaccttgtg gggatgcacg gatatttagt cctcacgaaa 1381 acgacactgg tgttgataaa catccaaata gaaaagctcg cggccagttg cgtacaaaaa 1441 tcgagtccgg tgaggggacg attccagtca aaagcagtga tggaatacag acgtgggatg 1501 gcgtgctgca gggccaacgc ttgctgacaa tgtcgtgctc ggacaaaatt gcacgatgga 1561 acatcgtggg tatacaaggc tccttgttgt cttccataat tgaaccagtg tacctgcatt 1621 cgattgtgct gggcagtttg ctgcacccag agcacatgta ccgtgcagtg tgcggccgga 1681 tcgaaaagtc cattcaaggt ctgccgccgc cgtatcattt gaataagccc cggctcgcat 1741 tggtcacttc ggccgagccg cggaatcagg ccaaggctcc aaactttggt atcaattgga 1801 ccattggaga taccgagttg gaagtggtga actcgcttac tggtcgaaca atcggcggtc 1861 aagtgtctcg catcacgaaa caggcgtttt ttgttaaata tggattttta atgacaaact 1921 taccaggtat tttagtccgc aaagtaacca cagactacgg gcaaaccaaa gctaacgtaa 1981 aggactatca gatcgcaaag ctagaattgt tttcggcatt caaacgtgaa gaccttggca 2041 gctggctgaa gaaacccatt gaacaagacg agttcggtct tgccgaatga ctgcactcag 2101 cactattata taatttaaaa aaagacaaca gtaacggcaa gcaattaata gaattagatg 2161 acatagattt tatgacaaac tcttatgtag aatgcaaatt aagttgggtg caaagacatc 2221 gatatgaaat tcatacgatt gagaacctgc caacattgcg tacccattgc aacagcaagc 2281 acaaagatgc ttatgctcga aatatgaaaa aaggctctag aatatttata gaatagaatg 2341 tagtttttat gctggaactg agtaaaggag tattatggcg tttttttttg aatcaattca 2401 ttttcaaatt ggttaaggca atctctttcg catctaagtt tgccacacgt ttcatttttt 2461 aaatcgaaat aaaacgattt cgccccaacc acactgttat aattttcaag tgagttgggt 2521 tgtttaagtg cccatatttt acaaaaatgt ggtaataaat aatgttgcaa gacaggtaaa 2581 acaagaaggg aagcccttgc agatcgttcc tatggcagct gtatgaaata gcactccaga 2641 gtttctgtat tatattgttt ttcctttatt ttccgatcgt tcatataata gtcatccatt 2701 ttttctttta atttaactcg ttattctaaa atatttttaa tattccctaa aaagaagaaa 2761 taatgtttaa aaacaacgaa tttataattt ttctctatta attttccgtt ttgatgtccc 2821 tctgcaaggg taaaaaacta taaaaccaac aagtaaaatc tataaataac aataaccaaa 2881 acagaaatct ctagactttg ttctgttatc gattaagcaa tgtattttgt taagtaatgt 2941 tatttgcaac gacataataa ttataataaa gtcacgctta ctataagcat aacgtaaact 3001 ttaggtgaat ctacattatt tccacatatt tttcttcaga tcatatatac acctaagctt 3061 tcatcgattt tcaataaata aaactgtgtt ctcggttgaa aaactttaaa tataaaaaca 3121 ttttatcaat ttaattatgt agattttttt aaaaattagt tgaaatcaca tgcaaatgaa 3181 aaggatataa atagattagt taaaaatttt atagcatgat aaagacattt taaataccta 3241 agtctaataa tgaagcttgt aacgccattt tgtataatgt agacgacata ttgtattagt 3301 tgtacacttg tacatcataa tattttctat taaaaactta cttcttcctg atttcttcca 3361 attggcttat ttctggttgt tcgatcaatt aaaaatggca attgtaaatg gtcaagaatc 3421 atgctgaaat acaaaagtat ttacttttta atgattgctc ttccaacgtg acctgaagta 3481 ttcgtattca atataaggcg atttggccct ttcttttcaa ttgtacatgg aaatggtacg 3541 attaataaac tagtcagatg tggtattctc attatcttta aaaattgagt catgtaaaat 3601 aagtattacg tcgaagttgc ataaaacacg aaaaagaaaa ggactgcaag acgttagagc 3661 agaacagctt atttcgtgca ctcagttgta atttttccga atcgacttga caacaacaaa 3721 aatacatacg acttcaaaaa agttaaaata ccgttttgtt atgatataat ttctcaagaa 3781 aacccgtttg tttattttcg tactagaaca cttcagctta tctcgtgcaa cgacttgtag 3841 aatagccgaa attattttaa ttgttttgtt ttttttacta agtttgtaac tttattatta 3901 acttgtaaaa cgctaaaatg ttgacaaata aattttagaa atttaataca tttatgtacc 3961 aaaatgcaaa aataaaatgt tttaacaaca atgaatataa attaatttca ctttaatttc 4021 tgaaatatta ttccttaaat acctgtattg ggtaattcct tattttccaa aaaataatta 4081 ttttatgaaa atttgatctt tgtttaatag taaatctaaa attagtaatt tcttattatt 4141 attttcaagg cctgataaat gtcaattttt aaatgtctgt acgaaataag ctctggaaat 4201 gtaatatacc ttacgggata ccaacttctg ttacaatatt ataatgaacg gggcttttta 4261 catgtgaaat tataagctaa gaaaacattg cttgcgattt tcaatatgtt ttgtattttt 4321 gaagttatgc cgatatcaaa aaatgaaatt atatattttt tcttttagtt tttttcgccg 4381 catgctaaaa ataaattggc agagtatgag tattcgtaaa agagaataca cagcttgtga 4441 gattttctcc attacttgat tatataataa tatataccat tctaatatga cgatataatt 4501 gacttaagta atatttgcaa aaaataccgc atatgatgga taaacaaaag ttgatcttat 4561 ataaaatact gtgatactaa attttactag tacttccagc atagctgcat tttatccatt 4621 cttaaatatt ctatgataag cagcagcaga taataatcaa tgactatata ggaaaacaaa 4681 aaatttttaa atgacatggc tcaatgcttg tctacattag attttcaaat aagaaatttt 4741 acaatatata tattaatacg tatgaaaagg tgggtataac attgggattc cttaaatatc 4801 attttaaatt gcaatgcaaa acaataggcc ctatgatgca agcataaata gatgatcttt 4861 agtcaactaa cttttattgc tgcaacataa caaaagtaca gaaaactgga gaacaaaaat 4921 atactggaac atatattaaa ttaaaatcaa taatatgtag gttagatgcg tcggtttatt 4981 caagacccag ctaagaaaag tttaatattt attaaaacaa ttatctaaga aagctgataa 5041 aactatgaga cattttttta atttaaatta gtttggggaa aagtaaatat ttacaatagt 5101 atgctagtca ttaaacgagt attctactct tgttatggaa tggctttgat tcttcacata 5161 ttaagttgat ttgcctaata attcgtatac atattatttt aaattataat tgagaactgt 5221 ttgcgaaaaa gaaatagaaa taccacagtt ttaaatggat attaattgta cttgcaagct 5281 tgacttacaa taatatagat aagaagtata caaagcaaaa ggttgctcaa attgcaaagc 5341 ttttggaaag tatttctctc tcttccggac aaaagtgtag tcctgcaaac atacataagt 5401 agatgcttat agaacacatc gggctatatt gtaacccgtt aaaacagtga taagaagatg 5461 cgttgagacc cgtaccacta tgatgtagac caaaacgagg caaagaaatg ttattaaaac 5521 cgtatagcag gaagataaac taatcaacca gtactacata catatgtacg ttgtcagcaa 5581 tccaacaaag atgtttggat tagtcgcata ggacaattac attatttgaa attgtacgaa 5641 tatttaagac aactaatgtc aaacttgggt taacttatat tctttagaat ctaaacatgg 5701 gcaacatcga aggtgaacac ttactattga tttgtagttt taaaatgttg aaagactata 5761 accaaatgaa ttatctaaga cacaaccggc aaaacctagt gccgttcaga gaaagggatg 5821 cacataaaaa tatgacaaat ctgctttcat ttatattttt aaacttcacg gcatctttaa 5881 atatcatctc tgagattaca gaatatatac ttactcatta acttcttatt ctgactacaa 5941 atgatataaa agacaaaaca cttaatatct aaatatacag aacaaacttg aatttaaaaa 6001 ctaggtttac acgttccaat tcgaacactt gaacttcact tatccacatt tcatcaagtt 6061 taccaagaca atttacatga cgattcattg aagtaccaaa gtatcaaaca atataatcgg 6121 aaaattaaaa atactgttaa atcgattatc tgtttttcga aaaagaatcc acattttcat 6181 ttaagcatcc acacattttt ttgattccac cgaaattttt taatttttaa ggataagtgg 6241 gtttataaaa gtcttaagca aatgcagaca tccaaaaatc gaatcgcttc tttagttttg 6301 aaaacagtat atgcataaca taatatataa aaatacacac ttatacgtaa atctttgttc 6361 ttgatcaaaa gttagtgcaa atatccaaac gaataaagca gaataataaa cacttaatat 6421 ctaaataaac agaacaaact ttaattaaaa gaaattaggt ttacactacg tacactaaaa 6481 cttcgcttat ctaaatttca ataagtacgt ttagataaac aaaacattaa gataccaaag 6541 tagtaacaat ctagtcggaa aatgagaaat catatttaaa tgcagtttat gttgcgacaa 6601 attaaatact tttttaggca ttgattgctt tcttggttct tcaaaatgtg taattttgga 6661 ggacaagtgg gttcaagaag gtcacaatcg aatgcagaca tcaaaaaata tgacattact 6721 ttaaacattt agttttaaaa caaacccgaa tgtaccatga aatcagtata tgcatagctt 6781 aatatataca aaatacacac ttatacgtaa aattttgttc ttcatcaaaa tttagtgcaa 6841 atagccagac gattaaaata gaataatagc aagcaacaac aacagtgttg gcggctacat 6901 taaaacaaat gtatcaatac tttaaaaatt ttaaaataga tcttacgatg gcctttttat 6961 tttataatcg actgtcagcc aataaaatga tccccacgtc attaaagccg aaa