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LOCUS XM_070219263 7450 bp mRNA linear INV 09-DEC-2024 (Adar), transcript variant X7, mRNA. ACCESSION XM_070219263 VERSION XM_070219263.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7450 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7450 /gene="Adar" /note="Adenosine deaminase acting on RNA; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins" /db_xref="GeneID:108063839" CDS 497..2527 /gene="Adar" /codon_start=1 /product="double-stranded RNA-specific editase Adar isoform X1" /protein_id="XP_070075364.1" /db_xref="GeneID:108063839" /translation="MLNSANNNSPQHPVSAPSDINMNGYNRKSPQKRRYEMPKYAVSP KKKTCKERIPQPKNTVAMLNELRHGLIYKLESQTGPVHAPLFTISVEVDGQKYLGQGR SKKVARIEAAATALRSFIQFKDGAVLSPLKPSGNLDFTSDEHLENGIENLSNKQLVEI IEPLMLTEKKSNLTSLEQPTLRLQMFCMSQNVSKSAITVDGQKKVPDKGPVMLLYELF NDVNFECINIDGAQNNCRFKMTVTINEKKFDGTGPSKKLAKNAAAKAALASLCNISYS PMVVPQKNVPLPIDDKSSSMELPQIHADTIGRLVLEKFMEVIKGQEAYSRRKVLAGIV MTENMNFCEAKVISVSTGTKCVSGEHMSVNGAVLNDSHAEIVSRRCLLKFLYAQLDLQ CNQATAYQSIFVRNTDGQYPYKLKSGVHFHLYINTAPCGDARIFSPHENDTGVDKHPN RKARGQLRTKIESGEGTIPVKSSDGIQTWDGVLQGQRLLTMSCSDKIARWNIVGIQGS LLSSIIEPVYLHSIVLGSLLHPEHMYRAVCGRIEKSIQGLPPPYHLNKPRLALVTSAE PRNQAKAPNFGINWTIGDTELEVVNSLTGRTIGGQVSRITKQAFFVKYGFLMTNLPGI LVRKVTTDYGQTKANVKDYQIAKLELFSAFKREDLGSWLKKPIEQDEFGLAE" misc_feature 665..853 /gene="Adar" /note="first double-stranded RNA binding motif of STRBP, ILF3, RED1, RED2 and similar proteins; Region: DSRM_STRBP_RED-like_rpt1; cd19865" /db_xref="CDD:380694" misc_feature order(665..667,674..679,686..691,695..697,737..742, 746..748,752..754,803..811,818..820) /gene="Adar" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:380694" misc_feature 1118..>1258 /gene="Adar" /note="double-stranded RNA binding motif (DSRM) superfamily; Region: DSRM_SF; cl00054" /db_xref="CDD:444671" misc_feature 1397..2512 /gene="Adar" /note="tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase); Region: ADEAMc; smart00552" /db_xref="CDD:214718" polyA_site 7450 /gene="Adar" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ggcgcttccc cacctctaca gaactctaac cgacgaagtg tcattgtttt tttttctaat 61 gtaatggact taaatctttg cattcgaatc gagtgaatcc gggactgcag tctccccccc 121 gaacaccaaa cacccaatcg aattcgcggc cagaggagcg gatagagagc accgaggata 181 gaggaaacgc ttaaaattga tttgtttgtc cggccatgtc agtgtgtgtg tgacaagggc 241 tcgtccgtgt gcgtgcgcct gtcgctgtgt gtgtgtgctc tctttttttt cttcctatcg 301 agtgccgcta aattgaataa ttgcagtaag agccaccaat ataaatatat gtatatccta 361 cccccctctc ctacaaagga acagtaaaaa taagagcaag aggaagaaca ctaactagcg 421 ttaaacaaat gaaactctgc cgatacagcg aagtaaaaat caataattag agctcgttcg 481 caagcgaaaa agagtcatgt taaacagcgc aaataacaat tctccccagc acccggtgag 541 tgcaccatct gatatcaaca tgaacggata taaccggaag tcgcctcaaa aacggcgcta 601 tgagatgcca aaatatgctg tatcaccaaa aaagaaaacc tgcaaggagc gcattccgca 661 gccaaagaat acggtggcaa tgctgaatga gttaagacat ggactgattt acaaattgga 721 gtcacagact ggtccggtgc acgcaccttt atttacgata tccgttgagg tcgatggaca 781 gaaatacttg ggccagggtc gcagtaaaaa agttgcacgc atcgaggcag ctgccacagc 841 actgcgaagc tttatacaat tcaaggacgg agccgtcttg tcgccattga agccatcggg 901 caacttggac tttaccagcg atgaacatct agaaaatggt attgaaaatt tgtccaacaa 961 acaattggtc gagatcattg agccgttgat gttgactgaa aagaaatcca accttacctc 1021 gcttgaacaa cccacgttgc gtcttcaaat gttttgcatg agtcagaatg tcagcaagag 1081 tgccatcact gttgacggtc aaaagaaggt tccggacaag ggtcccgtaa tgctgctcta 1141 cgaattgttc aacgatgtta attttgaatg cattaatatt gacggagctc aaaacaattg 1201 tcgcttcaag atgaccgtca cgattaacga aaagaagttc gatggaacag gtccttccaa 1261 aaagctggcg aaaaatgctg cggccaaagc ggcacttgcc tcgttgtgca acatttccta 1321 cagtccaatg gtggtgccac aaaagaacgt accccttcca atcgacgaca agtcgtcatc 1381 catggagttg ccgcagatac atgccgatac gattggacgc ctggttttgg agaagttcat 1441 ggaagtaatc aagggccagg aggcctactc gcgtcgaaag gtattggcgg gcattgttat 1501 gactgaaaac atgaattttt gtgaagccaa agttatttca gtctcgacgg gcaccaagtg 1561 tgtcagcggc gagcatatga gtgtgaacgg agctgtcctg aacgattccc atgccgaaat 1621 agtgtctagg cgttgtctcc tcaagttctt gtatgcacag ctggatcttc agtgcaatca 1681 ggccacagca tatcagtcga ttttcgtgag gaatactgat gggcaatacc cttataaact 1741 aaaatccggg gtacatttcc atttgtatat aaatacagca ccttgtgggg atgcacggat 1801 atttagtcct cacgaaaacg acactggtgt tgataaacat ccaaatagaa aagctcgcgg 1861 ccagttgcgt acaaaaatcg agtccggtga ggggacgatt ccagtcaaaa gcagtgatgg 1921 aatacagacg tgggatggcg tgctgcaggg ccaacgcttg ctgacaatgt cgtgctcgga 1981 caaaattgca cgatggaaca tcgtgggtat acaaggctcc ttgttgtctt ccataattga 2041 accagtgtac ctgcattcga ttgtgctggg cagtttgctg cacccagagc acatgtaccg 2101 tgcagtgtgc ggccggatcg aaaagtccat tcaaggtctg ccgccgccgt atcatttgaa 2161 taagccccgg ctcgcattgg tcacttcggc cgagccgcgg aatcaggcca aggctccaaa 2221 ctttggtatc aattggacca ttggagatac cgagttggaa gtggtgaact cgcttactgg 2281 tcgaacaatc ggcggtcaag tgtctcgcat cacgaaacag gcgttttttg ttaaatatgg 2341 atttttaatg acaaacttac caggtatttt agtccgcaaa gtaaccacag actacgggca 2401 aaccaaagct aacgtaaagg actatcagat cgcaaagcta gaattgtttt cggcattcaa 2461 acgtgaagac cttggcagct ggctgaagaa acccattgaa caagacgagt tcggtcttgc 2521 cgaatgactg cactcagcac tattatataa tttaaaaaaa gacaacagta acggcaagca 2581 attaatagaa ttagatgaca tagattttat gacaaactct tatgtagaat gcaaattaag 2641 ttgggtgcaa agacatcgat atgaaattca tacgattgag aacctgccaa cattgcgtac 2701 ccattgcaac agcaagcaca aagatgctta tgctcgaaat atgaaaaaag gctctagaat 2761 atttatagaa tagaatgtag tttttatgct ggaactgagt aaaggagtat tatggcgttt 2821 ttttttgaat caattcattt tcaaattggt taaggcaatc tctttcgcat ctaagtttgc 2881 cacacgtttc attttttaaa tcgaaataaa acgatttcgc cccaaccaca ctgttataat 2941 tttcaagtga gttgggttgt ttaagtgccc atattttaca aaaatgtggt aataaataat 3001 gttgcaagac aggtaaaaca agaagggaag cccttgcaga tcgttcctat ggcagctgta 3061 tgaaatagca ctccagagtt tctgtattat attgtttttc ctttattttc cgatcgttca 3121 tataatagtc atccattttt tcttttaatt taactcgtta ttctaaaata tttttaatat 3181 tccctaaaaa gaagaaataa tgtttaaaaa caacgaattt ataatttttc tctattaatt 3241 ttccgttttg atgtccctct gcaagggtaa aaaactataa aaccaacaag taaaatctat 3301 aaataacaat aaccaaaaca gaaatctcta gactttgttc tgttatcgat taagcaatgt 3361 attttgttaa gtaatgttat ttgcaacgac ataataatta taataaagtc acgcttacta 3421 taagcataac gtaaacttta ggtgaatcta cattatttcc acatattttt cttcagatca 3481 tatatacacc taagctttca tcgattttca ataaataaaa ctgtgttctc ggttgaaaaa 3541 ctttaaatat aaaaacattt tatcaattta attatgtaga tttttttaaa aattagttga 3601 aatcacatgc aaatgaaaag gatataaata gattagttaa aaattttata gcatgataaa 3661 gacattttaa atacctaagt ctaataatga agcttgtaac gccattttgt ataatgtaga 3721 cgacatattg tattagttgt acacttgtac atcataatat tttctattaa aaacttactt 3781 cttcctgatt tcttccaatt ggcttatttc tggttgttcg atcaattaaa aatggcaatt 3841 gtaaatggtc aagaatcatg ctgaaataca aaagtattta ctttttaatg attgctcttc 3901 caacgtgacc tgaagtattc gtattcaata taaggcgatt tggccctttc ttttcaattg 3961 tacatggaaa tggtacgatt aataaactag tcagatgtgg tattctcatt atctttaaaa 4021 attgagtcat gtaaaataag tattacgtcg aagttgcata aaacacgaaa aagaaaagga 4081 ctgcaagacg ttagagcaga acagcttatt tcgtgcactc agttgtaatt tttccgaatc 4141 gacttgacaa caacaaaaat acatacgact tcaaaaaagt taaaataccg ttttgttatg 4201 atataatttc tcaagaaaac ccgtttgttt attttcgtac tagaacactt cagcttatct 4261 cgtgcaacga cttgtagaat agccgaaatt attttaattg ttttgttttt tttactaagt 4321 ttgtaacttt attattaact tgtaaaacgc taaaatgttg acaaataaat tttagaaatt 4381 taatacattt atgtaccaaa atgcaaaaat aaaatgtttt aacaacaatg aatataaatt 4441 aatttcactt taatttctga aatattattc cttaaatacc tgtattgggt aattccttat 4501 tttccaaaaa ataattattt tatgaaaatt tgatctttgt ttaatagtaa atctaaaatt 4561 agtaatttct tattattatt ttcaaggcct gataaatgtc aatttttaaa tgtctgtacg 4621 aaataagctc tggaaatgta atatacctta cgggatacca acttctgtta caatattata 4681 atgaacgggg ctttttacat gtgaaattat aagctaagaa aacattgctt gcgattttca 4741 atatgttttg tatttttgaa gttatgccga tatcaaaaaa tgaaattata tattttttct 4801 tttagttttt ttcgccgcat gctaaaaata aattggcaga gtatgagtat tcgtaaaaga 4861 gaatacacag cttgtgagat tttctccatt acttgattat ataataatat ataccattct 4921 aatatgacga tataattgac ttaagtaata tttgcaaaaa ataccgcata tgatggataa 4981 acaaaagttg atcttatata aaatactgtg atactaaatt ttactagtac ttccagcata 5041 gctgcatttt atccattctt aaatattcta tgataagcag cagcagataa taatcaatga 5101 ctatatagga aaacaaaaaa tttttaaatg acatggctca atgcttgtct acattagatt 5161 ttcaaataag aaattttaca atatatatat taatacgtat gaaaaggtgg gtataacatt 5221 gggattcctt aaatatcatt ttaaattgca atgcaaaaca ataggcccta tgatgcaagc 5281 ataaatagat gatctttagt caactaactt ttattgctgc aacataacaa aagtacagaa 5341 aactggagaa caaaaatata ctggaacata tattaaatta aaatcaataa tatgtaggtt 5401 agatgcgtcg gtttattcaa gacccagcta agaaaagttt aatatttatt aaaacaatta 5461 tctaagaaag ctgataaaac tatgagacat ttttttaatt taaattagtt tggggaaaag 5521 taaatattta caatagtatg ctagtcatta aacgagtatt ctactcttgt tatggaatgg 5581 ctttgattct tcacatatta agttgatttg cctaataatt cgtatacata ttattttaaa 5641 ttataattga gaactgtttg cgaaaaagaa atagaaatac cacagtttta aatggatatt 5701 aattgtactt gcaagcttga cttacaataa tatagataag aagtatacaa agcaaaaggt 5761 tgctcaaatt gcaaagcttt tggaaagtat ttctctctct tccggacaaa agtgtagtcc 5821 tgcaaacata cataagtaga tgcttataga acacatcggg ctatattgta acccgttaaa 5881 acagtgataa gaagatgcgt tgagacccgt accactatga tgtagaccaa aacgaggcaa 5941 agaaatgtta ttaaaaccgt atagcaggaa gataaactaa tcaaccagta ctacatacat 6001 atgtacgttg tcagcaatcc aacaaagatg tttggattag tcgcatagga caattacatt 6061 atttgaaatt gtacgaatat ttaagacaac taatgtcaaa cttgggttaa cttatattct 6121 ttagaatcta aacatgggca acatcgaagg tgaacactta ctattgattt gtagttttaa 6181 aatgttgaaa gactataacc aaatgaatta tctaagacac aaccggcaaa acctagtgcc 6241 gttcagagaa agggatgcac ataaaaatat gacaaatctg ctttcattta tatttttaaa 6301 cttcacggca tctttaaata tcatctctga gattacagaa tatatactta ctcattaact 6361 tcttattctg actacaaatg atataaaaga caaaacactt aatatctaaa tatacagaac 6421 aaacttgaat ttaaaaacta ggtttacacg ttccaattcg aacacttgaa cttcacttat 6481 ccacatttca tcaagtttac caagacaatt tacatgacga ttcattgaag taccaaagta 6541 tcaaacaata taatcggaaa attaaaaata ctgttaaatc gattatctgt ttttcgaaaa 6601 agaatccaca ttttcattta agcatccaca catttttttg attccaccga aattttttaa 6661 tttttaagga taagtgggtt tataaaagtc ttaagcaaat gcagacatcc aaaaatcgaa 6721 tcgcttcttt agttttgaaa acagtatatg cataacataa tatataaaaa tacacactta 6781 tacgtaaatc tttgttcttg atcaaaagtt agtgcaaata tccaaacgaa taaagcagaa 6841 taataaacac ttaatatcta aataaacaga acaaacttta attaaaagaa attaggttta 6901 cactacgtac actaaaactt cgcttatcta aatttcaata agtacgttta gataaacaaa 6961 acattaagat accaaagtag taacaatcta gtcggaaaat gagaaatcat atttaaatgc 7021 agtttatgtt gcgacaaatt aaatactttt ttaggcattg attgctttct tggttcttca 7081 aaatgtgtaa ttttggagga caagtgggtt caagaaggtc acaatcgaat gcagacatca 7141 aaaaatatga cattacttta aacatttagt tttaaaacaa acccgaatgt accatgaaat 7201 cagtatatgc atagcttaat atatacaaaa tacacactta tacgtaaaat tttgttcttc 7261 atcaaaattt agtgcaaata gccagacgat taaaatagaa taatagcaag caacaacaac 7321 agtgttggcg gctacattaa aacaaatgta tcaatacttt aaaaatttta aaatagatct 7381 tacgatggcc tttttatttt ataatcgact gtcagccaat aaaatgatcc ccacgtcatt 7441 aaagccgaaa