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LOCUS XM_070219250 3119 bp mRNA linear INV 09-DEC-2024 transcript variant X3, mRNA. ACCESSION XM_070219250 VERSION XM_070219250.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3119 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3119 /gene="Sk1" /note="Sphingosine kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108066905" CDS 163..2097 /gene="Sk1" /codon_start=1 /product="sphingosine kinase 1" /protein_id="XP_070075351.1" /db_xref="GeneID:108066905" /translation="MTANTATSEEHLLGNGGHAQEPSTPTSSLDTADTSDTTTLPSEL SEIFFVDNSRRKQSIKIQVKLCPEGVYLRRETDEDDHINEQLIRIDDIIGSRYGPRLK KRARGGLTSCRNPQVPTGQEEEPEPDSDNSAYLYIYAYLKKEKPLRRVQTLRILRFRS SNDYGVNLQTAEQWHHTIRRHKRGSGSQFPDSPKPLLILLNPKSGSGKGRELFQKQVA PLLSEAEAQYDLQITTHPQYAKEFVRTRRDLLERYSGIVVASGDGLFYEVLNGLMERL DWRRACRELPLGIIPCGSGNGLAKSVAHHCNEPYEPKPILHATLTCIAGKSTPMDVVR VELAPRDKHYVMYSFLSVGWGLIADIDIESERLRSIGAQRFTLWAIKRLITLRTYKGR VSYLLSKKQKNQEKPVEVAREAKESIPSIRSSLPINANGEFRDLPEEEEEDEQFADAI SLDRSVYRQHADSWHSAMSRRTAYYSLGGPSLRSNRSRMSLSQRIEAANADFAEKVPT GTIPGLQIPVQGCEDWISEEGDFVMVHAAYTTHLSSDVFFAPESRLDDGLIYLVIIRS GVSRHQLLNFMLSLNTGTHLPEDGENDPFIKVVPCRAFRIEPSSSDGILVVDGERVDY GPIQAEVMPGLINVMTTSGQ" misc_feature <739..2022 /gene="Sk1" /note="diacylglycerol kinase/D-erythro-sphingosine kinase; Region: PLN02958" /db_xref="CDD:215517" ORIGIN 1 ggtataacaa gtaaatcgaa tgaaagtaaa gataaaaata aaaatacaaa taaaagcata 61 atagtagagc agcagcaact ggcagaagat aaagacatgg gcaaaggcag ccaaagacaa 121 ggtcaaagaa gcgctaaaaa aacagaaata tagtaaagaa aaatgacggc caacacagcg 181 acgtcggagg aacatctgct gggaaatggt ggccacgccc aagagccctc cacgcccacc 241 tcctccttgg ataccgcgga tacttccgat acaactactt tacccagcga actgagcgag 301 atcttcttcg tggacaacag ccggcgcaag cagagcatca aaatccaggt gaaactctgc 361 cccgagggcg tttacctgcg tcgcgagacc gacgaggatg atcacatcaa cgagcagctg 421 atcaggatcg atgatatcat aggttcacgc tatggacctc gtcttaaaaa acgcgctaga 481 ggtggcctga cctcctgccg taatccccag gtgcccacgg gacaggagga ggaacccgaa 541 ccggatagcg ataatagtgc ctatctgtac atctatgcct atttgaagaa ggagaagccg 601 ttgaggaggg ttcaaaccct caggattcta cgcttccgat cgagcaatga ctatggcgtc 661 aatcttcaga ccgccgagca gtggcatcat acgattcgca ggcataagag gggttccgga 721 tctcaatttc cggattctcc caagccgctg cttatactac taaatcccaa atcgggttcg 781 ggcaagggtc gcgaactctt ccagaaacag gtggccccac tgttgagcga agcggaggcc 841 cagtacgatc tgcagatcac cacacatccg caatatgcca aggagtttgt gcgaacgagg 901 agggatctct tggaacgcta ttccgggata gtagtggcct ctggcgatgg actcttctat 961 gaagttttga acggtctaat ggaacgtctg gattggcgac gtgcctgccg ggagcttccc 1021 ttgggcatta taccctgcgg ttcgggcaat ggtctggcca aaagtgtggc ccatcattgc 1081 aatgaaccct acgaacccaa gcccattctc catgccacct tgacctgcat tgccggcaag 1141 agtactccca tggatgtggt cagggtggaa ttggcgccga gggataaaca ctatgtgatg 1201 tactcctttc tgtccgtcgg ttggggtctt atagccgaca tcgatataga aagtgagcgc 1261 ctgcgatcga ttggagctca acggtttacc ctgtgggcca ttaagcgttt gattacgctg 1321 agaacttaca agggcagggt atcctatttg ctgtcgaaga agcaaaagaa tcaggagaag 1381 ccagtagaag tggccaggga agccaaggag agtataccat ctatacgttc ttctttaccc 1441 ataaatgcta acggagaatt tcgggattta cccgaggagg aggaagagga tgaacagttt 1501 gccgatgcca tttccctgga tcgttcggtt tatcgccaac atgccgacag ctggcactcg 1561 gccatgtcga ggagaacggc ctactattcc cttgggggac ccagtctgcg ctccaatcgc 1621 agtcgaatga gtttgagcca acgcatcgag gcggccaatg cggatttcgc tgagaaagtg 1681 ccaacgggca cgattcccgg tctacagatt ccagttcagg gttgcgaaga ttggatctcc 1741 gaggagggtg actttgtgat ggtccatgcc gcctacacaa cgcacctctc gtcggatgtg 1801 ttctttgcac ccgaatcccg gctagacgac ggcctcatct atctggtgat catcaggagc 1861 ggtgtgagcc gacatcagtt gctcaatttc atgctcagcc tgaatacggg cacccatctg 1921 cccgaggatg gcgagaatga tcccttcatc aaggtcgtcc catgccgggc attccgcatc 1981 gaaccgagca gctccgatgg catcctggtt gtggatggcg aacgggtgga ctacggaccc 2041 atccaggcgg aagtgatgcc cggactgatc aatgtgatga ccaccagtgg tcagtagtcg 2101 gtagtcagta gtcggtagtc acacggaaaa aaaaaatcgt aatggtgaat ttgatatttt 2161 ttaaagatca agtcatatca ttttgatatg aataaagatt atgtcaatct ttttttttat 2221 attatttgct caaaaaatac taaatttggt atttttatga tatgataaaa tatcatgttg 2281 atatatttga atcttaaatt tgacataaat catatcggtt tttttctgtg caatagtagt 2341 gcccttcaga actatcagac gacttgggaa gtaaagtagg ggaatttgat aggcaaatac 2401 atacaccaaa tatatataaa aatcattgct aaccaaataa aaggtggtaa atctattaaa 2461 aaatcccaaa tctgttacac attcagttat catacatttt ttaactcttc ataactccta 2521 agatattttt ctgttcaaag tatacgattt ttgacattat taggtaataa gttatctctg 2581 tttctattat tagtgaattc cattctcata gttctcaatc gcaatctgta atttttccat 2641 ccgcccaaaa aaaaaaaaaa aaaaaacttc acaatatgca cttaagtagt tggttaagtt 2701 ggtttctatt actttttttt tgtttgttaa tcggtcgata gtgttaatta ttttaagacc 2761 catacgtaga cgaataaaac aaataaaaac gttataaaaa aagattatga gtggctacaa 2821 gtggtatttg caggcaggtg ttttttgttg ccgtggaaac gatcttcttg aaccgcaaaa 2881 accaaaaacg aagctttgca aatccacaaa ttcgaattct tcgctcatcc ggttgcatgc 2941 caatcgatcg atctttatcg atatcagctt agcagccccc aacccaaaac cggggccttg 3001 aggggcctcc aaagtcgagg aggcacctac acgaaggcaa atggggaaac gcacctggtc 3061 gatgttcaag tggggacttc ataattgtgt taatacaaac accgattggc aagattaac