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LOCUS XM_070219235 3332 bp mRNA linear INV 09-DEC-2024 (LOC108068044), transcript variant X6, mRNA. ACCESSION XM_070219235 VERSION XM_070219235.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3332 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3332 /gene="LOC108068044" /note="YLP motif-containing protein 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108068044" CDS 612..1925 /gene="LOC108068044" /codon_start=1 /product="uncharacterized protein isoform X6" /protein_id="XP_070075336.1" /db_xref="GeneID:108068044" /translation="MSSTSSSVLTLSSFNLLFFTQVLTVLSSTIKYNEYATDKGGNVS IPCIAQGNIMWVKEHGNNSTIIQTGRVLVLRNVSTTDAGIYVCFASVPRPSTTTSAAA AATTTSKPATSATTSPQNQQEKETQPVVDKNEDGIDEEPQVEEELEYQAQQRTRLIVR TVPGPVSQLYFKASTILGFLIWRFNKTQSGGYPVRSFTAEFRNVSYKTPPANASFEHA WSRMDPINIAFNVRQMEVYRLAPNTTYEFRIWANNELGSGEVVTTNVTTLPETKEEAS RMLKVRVRRVIRMAGRRGRMTTTMKMWPCPFRAPSSLASTIGRLRRRASTCHRRTTSS SSTTTTCSTTSITTTGGRTRTTTTTTRRSTSPPWSGSSAKFPSSSPDPPSSAFETHLS TNTGHQGCCTVKIRIRIGIVRIHRAYRWEASFSFRFLLAKLKQMI" misc_feature 696..881 /gene="LOC108068044" /note="Immunoglobulin domain; Region: Ig_3; pfam13927" /db_xref="CDD:464046" ORIGIN 1 gcaactcgaa cgcaacggta catgaacggc ggaaagctaa cgagaatcca caagaatcca 61 gtgtcccgtt aacaacaact ctctccaaac accgaattgc agttaaatta aacaaacact 121 acgtaatttt ttttcaagtt gaatatttcc aagttgaact atcttgaata ccacctttcc 181 caaccgcaag cagtgcttaa aatgcccgaa aaatcagcag ccgcattttg aagttacgtc 241 aaaaggagtc gcgaaagagg aggaccaaga ggagaggaga aaggagggaa gagaaggagc 301 aaaaataaca acaaagcgaa cgcacgcgat aggagtaaca gtaaatgtga aaggataaaa 361 taggagaaag tagtgaaatc agcaagagaa cttttcttta ttttcttcag tttttttttt 421 ttggtttttg gcgcgtcgtc gctgtttgct tttttgtttt tattattttc tctctgtgcc 481 tgcgcctttg ttgattgctt tgcagccggc tttggccaaa agggaggggg cgataaagct 541 aggaggagaa ggaggaggag cagagaaagc agaagcttat gtaaagcgtg ctttaagcgt 601 gctatggaag catgtcgtcc acttccagct ccgtgctaac gttgtcatcg tttaatctat 661 tatttttcac ccaagtgctc acggtactca gctcgacgat caagtacaac gaatacgcga 721 cggacaaggg cggcaatgtg agcataccct gcatagccca gggcaatatt atgtgggtga 781 aggagcacgg caacaacagc acgataatcc agactggtcg tgttttggtg ctgcgcaatg 841 tgagcactac ggatgcggga atttacgtgt gcttcgcctc agtgccacgc ccatcgacaa 901 caacaagtgc agcagcagca gcaacaacga caagcaaacc cgcaacatca gcaactacct 961 caccgcaaaa tcagcaggag aaagaaacgc agccagtggt ggataaaaat gaggatggta 1021 tcgatgagga accccaagtg gaggaggaac tggagtacca ggcccagcag cgaaccaggc 1081 tcatcgttcg caccgttccg ggcccagttt cgcagctcta cttcaaggcc tccaccatac 1141 tgggcttcct catctggcgc ttcaacaaga cccaatccgg gggctatccg gtgcgcagct 1201 ttacggccga gttccggaat gtctcctaca aaaccccgcc ggcgaatgcc agtttcgagc 1261 acgcctggag caggatggat ccaatcaaca tagccttcaa tgtgcgccaa atggaagtct 1321 atcggctggc ccccaacacc acctatgagt ttcggatatg ggccaacaac gagctgggca 1381 gcggcgaggt ggtcaccacc aatgtgacca cgctgccgga gaccaaggag gaggcgagtc 1441 ggatgctcaa ggtcagggtc aggcgggtga tccgaatggc ggggaggagg ggcaggatga 1501 cgacgacgat gaagatgtgg ccatgccctt tccgcgcacc atcatctttg gccagcacca 1561 tcggacgcct ccgccgccgc gcctccacct gccaccgccg caccaccagc agcagcagca 1621 ccaccaccac ctgcagcacc accagtatca ccaccaccgg cggcaggacg aggacgacga 1681 cgacgactac gaggaggagc acgagcccac catggagcgg ttcaagcgca aagtttccgt 1741 cttcttcacc ggacccacca tcaagcgcat ttgagacgca tctgagtaca aacactggtc 1801 accaaggttg ttgcacggtt aagattcgga ttcggatcgg gatagttagg atccatagag 1861 cttatcgttg ggaagcctcg ttttcatttc ggtttctcct ggccaagctt aaacaaatga 1921 tatagtaatc tatttattgc tcattgtttt tgcttctccc cgcgaatcac acacaactct 1981 atatattata tagtagtata tacacacacg tattataaat ataaaccaaa acaaatatat 2041 tgctgtgata caaattcaat tgaacggaca ttgtaaggat ttaccataga gcacacgaaa 2101 cacacacgaa gttattaacc atcatgaatt tgctgaagct cgtagatgaa agcccatata 2161 tatatatatt gaattttgcc tagttaaaca cgctaactga gttgcagcaa ctggattaga 2221 cgatccttag atccttaaaa cagaacaaac tcccaaaaga gatctattgc catgtgttaa 2281 aaataataag ttgtcttaga aattgtccga ttgtctgtta aattaaatta ataactcatg 2341 tttttctatt cataatcaaa attaaactaa acctatagcc gattgtaaaa gatctccaat 2401 agtccaggta cccgactata tcgttcttga tttccattct gtttgaaaag attcaacaaa 2461 ctgtgaaaca attttataat tgagcaaata ttttgcactg tagagcgcac caaacgatct 2521 ttatacagat gtatgagtat atatattaaa aaccgattaa aaacgtttga taaacatttt 2581 aaataaacgg caaaatgtgc catgtgcttt agttcggcct caaagctaat taaattgaat 2641 acgatatatg atatgatata ggaatattta tgaacgtagc taaagtagct gggcaaccag 2701 agatattcaa aagtaaataa agaaaaactg cttccactca cagaaaacca aaaacgaaaa 2761 acaaaatcga aacaatgaaa ttgttataaa agataaatca aaactaattt taaacaagcg 2821 aatattgtgt atataccgat gctaaaaaaa tatatatatc taaatatata gggagtgggg 2881 aatgtacgca cacatgtgag ggatgtacat aaagatagcg agtgggtatc tcttaagaaa 2941 gactgtagct aatctttaag acactttggc ctgcgcttat accagttttt ggttttggtt 3001 ctaaccattt tttgcatcga tctgctagag ctacaaacaa gtatatagaa ataatatttc 3061 taacaattcg gaatgtgcac ttaactaaac cagaaaacca aaaaaaaata cagaaaaaaa 3121 acacgaaata aataaaacta aagtcgccta agcctaagcc tgagccccga tcctaaactc 3181 ttggctgtac ttctaattgt tattgcttca ggttgaggtt cattgttatt gcgccagcct 3241 cccgtcagcg aaattgctcc ctaatcccta atcactctaa agaaattatt ttccaaccca 3301 aggctaagcc agcttctaag gagaagctta ga