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LOCUS XM_070219233 4332 bp mRNA linear INV 09-DEC-2024 (LOC108068044), transcript variant X3, mRNA. ACCESSION XM_070219233 VERSION XM_070219233.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4332 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4332 /gene="LOC108068044" /note="YLP motif-containing protein 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108068044" CDS 167..4231 /gene="LOC108068044" /codon_start=1 /product="putative uncharacterized protein DDB_G0289263 isoform X3" /protein_id="XP_070075334.1" /db_xref="GeneID:108068044" /translation="MWGHWQTATGAVAPMGMGMGMGMGMAMPMGMGMGAPPPQPSVPP PLPDAPPPPPPADGGGAAAGGAPGAATQLTDSSSATPSASTFNPYASGGQAAEGGEAA GGNPYKQYTAAQYAAMTPEQQYALQHHWHQWQTYQAEYAKWHAQYGEQYKREMAAAAA VAATGGVQGVQGVPAPVAAAPSPAAAPVAAPVAAPPGPQAYPVAQNYYQAAPAASPSA PSAVSTTTPNSGPPLPGKIMAQPQMYNQPPPPPPQKSNYNQQNQSSNDLWSQPPPSNR YGGQNNQMNYNSNNAGPSDNQGSGGGFPNLQQPPPSLQRPPPQQENQWGNNNQQRGNN NSNNRNSWESSGPSTDNSGQQNRWDGPPPQNEMNNRWNGPPQGNQNNSNNNTNNNNDN NNRRWDGSSNQTQSGGDRDQQSRWMSGPPPGEQNRWMSGPPPSLSDQDQQDNQQQNNN NQQQNPRQNRWQSNSNNNSNSDMGNNSKQNNFQNNRKSWLSAEERGGGNPSQNPFNKN SQSSDFDQDQSSGNNNNNFGQQRGNFGGYNNQGNSYNNQDQGGGGGNNFGGNQGTRGR DNFGNSNNNFNNNRRQSNRWDTNRNQNQNQGYSDSGGNNDSGGGNYNQNRGNFNQRNA PFQQQQNQSQNQNTNQNQNRQQQQQQTPDLDEASFDRLFDQWEQQFEDWKRANANHPD RDEYRRYEEEFEKQRRRIAERREQMRRRRQQQMGSGSASGSSTDLPKEVGASQTEEQE DDGNFSDQEQGSKSNFSAPAFRGNNQGRQSQYQPASQQELKEKQPVNPTKTPQKVITP APPVAPPMAPVHPASLPPPSEVPGPPAPPVAPPQPPTASNLGKRRQTANPAPTPTPAK QVKQEEEPIFTISLDDDDDTDEDELPAAAAAAETPMGSIFKKSDGIPGLDLVEAEQGE STEAPVAANKNESLSNVLKDPNFLNNLTQAVANVQEREQRDRQQQQQQQGQDAPPDQE RGKDGRPLSFAEWQRKKNGGNDNKSQDSRDSMSPSVAEKPEAGGPGGNTNPNPRSRPN SGPGHGPPNDGPPRFDNFGPNQVPGGNFMDFEGPNGPGPGFGPPGRNFGPRGPNFGPG PGNNFGPGPFGPGGPHFGPGPGPNFRNNGPNFNPNFGPNFGPGGPRNFGPRGGPFGGP RRDDFGGPPFGGPNFGPGGPGGPNQRGFNGPGGPGGPAPNSDNPFRRQGGPPGPNFGD DDLGAGPPRGPRNFPNRNSFGNAGGPGNNQNNNRNKNWNDGAHGTQLDDQVQRIRDGQ GRQCEHTLHSPGQYYVGEGARQQQHDNPDWSCFGAAQCEHYGCGNLRVLRLSATPIDN NKCSSSSNNDKQTRNISNYLTAKSAGERNAASGG" ORIGIN 1 gttttcaagc caaaaatggc gaagttttca gtttttttct cgtcccgatt gcaagtgatt 61 ttgtgaagcg ctcttagttt tccggatagc ccgtgttttc cgtgttttcc ggcaaacgag 121 aactaaacag agagtgagcg agaagagccg cgagtgaaag cgcagcatgt ggggccattg 181 gcagacggcc accggcgcag tggctccgat gggaatgggc atgggcatgg gcatgggcat 241 ggccatgcca atggggatgg gaatgggtgc tccgccgccg cagccttcgg tgccgccgcc 301 cctgcccgac gccccgcccc cgccgccgcc agcggatgga gggggagcag cagcaggagg 361 agctcctgga gcagctactc aactcaccga tagcagcagc gctacccctt ccgcttccac 421 tttcaacccc tatgccagcg gcggccaggc ggcggagggg ggcgaggcgg ccgggggcaa 481 cccctataag cagtacacgg ccgcccagta tgcggcgatg accccggagc agcagtacgc 541 cctgcagcac cactggcacc agtggcagac ctaccaggcg gagtacgcca agtggcatgc 601 ccagtacggc gagcagtaca agcgtgaaat ggccgctgcc gccgccgtgg ccgccactgg 661 aggagttcag ggcgtccagg gagttcctgc tcccgtggcg gcggctccct cgcccgccgc 721 tgctcccgta gccgctcccg tggctgctcc accgggtcca caggcctatc ccgtggccca 781 gaattactac caggctgccc cggctgcctc gccatccgct ccatcggctg tttccaccac 841 cactcccaat tccgggccac cgctgcccgg taagatcatg gcccagccgc agatgtacaa 901 ccagccgccg ccgccgccac cgcaaaagag caactacaat cagcagaatc agagcagcaa 961 tgacttgtgg tcgcagccgc cgccttctaa ccgatatggc ggtcaaaaca accagatgaa 1021 ctacaatagc aacaatgctg gaccatcgga caaccaggga agcggaggag gatttcccaa 1081 tctccagcag ccgccgcctt cgctgcagcg tccgccgccg cagcaggaga accagtgggg 1141 caacaacaac caacaacgcg gcaacaacaa cagcaacaat cgtaactcct gggagtccag 1201 tgggccatca accgataatt ctgggcagca aaatcgctgg gatggacctc ccccgcaaaa 1261 tgaaatgaat aatcgctgga atggaccgcc gcagggcaac caaaacaaca gcaacaacaa 1321 cacgaacaac aacaacgaca acaacaatcg ccgctgggat ggcagctcga atcaaacgca 1381 gtctggcggg gatcgggatc aacagagccg ctggatgagc ggcccgccgc ctggcgaaca 1441 gaaccgctgg atgagcggac caccgcctag cttgagcgac caggatcagc aggataatca 1501 gcagcagaac aacaacaacc agcagcagaa tccccgccag aatcgctggc agagcaacag 1561 caacaacaac agtaattccg atatgggaaa taacagcaag cagaacaatt tccaaaataa 1621 tcgaaagagc tggttgtcag cagaggagcg aggagggggc aatcccagcc agaatccatt 1681 taacaagaac tcccagtcat ctgatttcga tcaagatcaa tcctccggca ataacaacaa 1741 caactttggc cagcaaagag gcaactttgg cggttataac aaccagggga atagttataa 1801 caaccaggat caaggaggag gaggaggaaa caactttgga ggcaaccagg gaacccgagg 1861 aagagacaac tttggcaata gcaataataa cttcaacaac aatcgccgcc agagcaatcg 1921 ctgggatacg aatcgcaatc agaatcaaaa tcagggatat tctgattccg gaggcaacaa 1981 tgattctggc ggagggaact acaaccaaaa tcgtggcaat ttcaaccagc ggaatgcgcc 2041 attccaacag cagcagaatc agtcgcaaaa tcagaatacc aatcaaaatc agaaccgcca 2101 gcagcagcag cagcaaactc ccgacttgga cgaggccagc tttgaccgcc tgttcgacca 2161 gtgggagcag cagttcgagg actggaagcg ggccaatgcc aatcatccgg atcgcgacga 2221 gtatcgccgc tacgaggagg agttcgagaa gcagcgccgt cgcattgcgg agcgcaggga 2281 gcagatgcgt cgtcgtcggc agcagcaaat gggatcggga tcagcttctg gatcttctac 2341 agatctaccc aaagaagtgg gagcttcgca aaccgaagag caggaggatg atggcaattt 2401 cagtgatcag gaacagggat cgaagtccaa tttcagtgct cccgccttcc gtggcaacaa 2461 ccagggaagg cagagccaat accaaccagc cagccagcag gagttaaagg aaaagcagcc 2521 agtcaacccg actaaaactc cccagaaggt gataacacct gctccaccgg tggcgccacc 2581 aatggctccc gttcatccgg cttccctgcc gccgccaagc gaagttccgg gtccgcctgc 2641 tccgccggtg gctcctcctc agcctccgac cgccagcaat ctcggaaagc gtcggcaaac 2701 ggccaatccc gcacccactc ccacgcccgc caagcaggtg aagcaggagg aggagcccat 2761 cttcacgatt tccctcgacg acgacgacga tacggacgag gatgagctgc ccgccgccgc 2821 cgccgctgcc gagacgccca tgggcagcat tttcaagaag agcgatggca ttccgggcct 2881 ggatttggtg gaggcggagc agggagaatc taccgaagct ccagtcgctg ccaacaagaa 2941 tgaatccctg agcaacgtcc taaaagaccc gaatttcctc aacaatctca cccaggctgt 3001 ggccaatgtc caggagcgcg agcagcgcga tcgccagcag cagcagcagc agcagggaca 3061 ggatgctcct ccggatcagg agaggggcaa agatggacgc ccactgtcct ttgccgagtg 3121 gcagcgcaag aagaacggcg ggaatgacaa caaatcgcag gattcccgcg attcaatgag 3181 tcccagtgtg gcggagaagc cggaggcagg cggaccaggt ggtaatacca atccgaatcc 3241 tcgttctcgt ccaaattcgg gaccaggtca tggacccccc aacgatggac cccctcgctt 3301 tgacaacttt ggaccgaacc aagtgcccgg cggcaatttc atggactttg agggacccaa 3361 tggtcctggt cctggttttg gtccgcccgg gcggaacttt gggccacgtg gacccaactt 3421 tggtcccggt ccgggtaaca actttggacc cggacccttt ggacccggag gaccgcattt 3481 tggacccggt cccgggccga atttccgcaa caatggcccc aattttaatc ccaactttgg 3541 accgaacttt ggacccggag gtcctcgcaa ctttggacca cgtggcggtc cctttggcgg 3601 tccgcgacgc gatgactttg gtggcccgcc tttcggggga cccaactttg gaccaggagg 3661 acctggagga cccaaccagc ggggattcaa cggaccagga ggaccaggag gacccgcacc 3721 caacagtgat aatcccttcc gccggcaggg cggaccaccg ggtcccaatt ttggcgacga 3781 tgatctgggc gctgggccac caagaggacc caggaatttc cccaaccgca acagcttcgg 3841 aaatgcagga ggaccgggaa ataaccaaaa caacaatcgg aacaaaaact ggaatgatgg 3901 tgctcacggt actcagctcg acgatcaagt acaacgaata cgcgacggac aagggcggca 3961 atgtgagcat accctgcata gcccagggca atattatgtg ggtgaaggag cacggcaaca 4021 acagcacgat aatccagact ggtcgtgttt tggtgctgcg caatgtgagc actacggatg 4081 cgggaattta cgtgtgcttc gcctcagtgc cacgcccatc gacaacaaca agtgcagcag 4141 cagcagcaac aacgacaagc aaacccgcaa catcagcaac tacctcaccg caaaatcagc 4201 aggagaaaga aacgcagcca gtggtggata aaaatgagga tggtatcgat gaggaacccc 4261 aagtggagga ggaactggag taccaggccc agcagcgaac caggctcatc gttcgcaccg 4321 ttccgggccc ag