Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070219231 3605 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_070219231 VERSION XM_070219231.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3605 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3605 /gene="Sp1" /note="transcription factor Sp8; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108068010" CDS 432..2621 /gene="Sp1" /codon_start=1 /product="transcription factor Sp9" /protein_id="XP_070075332.1" /db_xref="GeneID:108068010" /translation="MLTDMTPTAGQLYGSQIPAMGMNITNIATHLQKPQVNPDHPSLR GTPLAMLAAQCNKLSNKSPPPLADAAVGKGFHPWKKSPNSPAAGSSGGSSGGGGGGGG GSSAGQHSPCAISAASSSSSSGSSGGHSSRSLSASASTMVNITASIYPYSRPLASSCA AVGGGGGGGSSGGSSGGSSGGSSSSSSAASGSQSSSSAAVAAAAYGGDLYFPNTSTSN MDNHHMHQGLLGKVEAAGAAAFGGVYSRHPYDWPFNAVTHKEAASVNSGWWDMHSAAG SWLDMGGAGMHSTMANYASENYSSALSHSLLGSGQHLLQDTYKSMLPGQGVGVGVGVG VGVGMGGFSLPHSSPSAAAAAAAATAAAAAGSPQGGSPSTPSPRSQRRYAGRATCDCP NCQEAERLGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFC GKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTHNGNGTSSGHQSSH NGHGGGLKKGSSESCSDSEEAANQSGESNGLGGVGSGPQTGGAGGGGGGVSGGSGTVT GGSGSGSSSGSSSNANSTNSNSVSGSGGGSHPGTPTSLHAHSANGTSSSLLGGGLHLA TPHQMVAAGGSPVMLHQQQQQQQQQQQQQQQQQQHHQQQQQHLQQQQHLQQQQQHHHQ QFGQQQQQQQHHAHHLHHHAHHSHHLATGGSPGLDPSSLVDIKPPMV" misc_feature 579..1673 /gene="Sp1" /note="N-terminal domain of invertebrate transcription factor Specificity Proteins (SP) similar to SP6, SP8 and SP9; Region: SP6-9-like_N; cd22547" /db_xref="CDD:411694" misc_feature 1683..1742 /gene="Sp1" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(1695..1697,1701..1703,1707..1709,1713..1718, 1725..1730,1737..1739,1785..1787,1791..1793,1803..1808, 1815..1820,1827..1829,1869..1871,1875..1877,1881..1883, 1887..1892,1899..1904,1911..1913) /gene="Sp1" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 1716..1799 /gene="Sp1" /note="Zinc-finger double domain; Region: zf-H2C2_2; pfam13465" /db_xref="CDD:463886" misc_feature 1764..1832 /gene="Sp1" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1806..1877 /gene="Sp1" /note="Zinc-finger double domain; Region: zf-H2C2_2; pfam13465" /db_xref="CDD:463886" misc_feature 1848..1916 /gene="Sp1" /note="Zinc finger, C2H2 type; Region: zf-C2H2; pfam00096" /db_xref="CDD:395048" misc_feature 1854..1916 /gene="Sp1" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" ORIGIN 1 acgatcagcg acgacggcgt tacttttggc gcggatacaa gcagcgacac ttttttttcg 61 ttggcaggcg cctcctgtca ccaaacaaac aacaacaaca aaacaacaaa caaaaaaaca 121 tctataaaca acaataaaca aacaaagcat aaaccataaa cataaacaag cagccaagct 181 aaacgaaaac aactgtgcat tttttgtaaa aaccagtgag cctctgctgc gacaataaca 241 acaaaacaaa aagaaaacaa caaagaaaaa gaaaccgaac tctaaaaccc tattgtgtga 301 gaaaacccaa gtggctgcaa aaagacacca tcattgtgcg cctcaaattg acagcggcag 361 cagcagcagc gacgacaact gcaactgcaa ctgcaactgc agcagcaaca gcaacagcga 421 tcgccacaaa catgctaacg gacatgacac cgaccgccgg tcagctctac ggatcccaga 481 tcccggccat gggcatgaac atcaccaata tcgccacaca cttgcagaag ccacaagtta 541 atccggacca tcccagtttg aggggaactc cgctggccat gttggccgcc cagtgcaaca 601 agctatccaa caaatcgcca cccccgctgg ccgacgccgc tgtgggcaag ggcttccatc 661 cgtggaagaa gagtcccaat tccccggcag cgggctccag tggaggatcc tctggcggag 721 gaggaggcgg cggcggagga agcagcgccg gccagcactc gccctgcgcc atctcggcgg 781 ccagctcgtc gagctccagc ggatcgagcg gcggccactc ctccaggagc ctctccgcca 841 gcgccagcac catggtgaac atcacagcta gcatctatcc ttacagtcgc cccctggcct 901 cctcctgcgc ggccgtgggc ggtggtggtg gcggtggctc ctccggtggc tcctccggcg 961 gctcctccgg cggctcctcc tcctcctcct ccgccgcctc cggatcgcag tcatcctcct 1021 cggcggccgt ggctgcggct gcctacggcg gtgacctgta cttcccgaac acctccacct 1081 cgaacatgga caaccatcac atgcaccagg gtctcctcgg gaaagtggag gcagcgggtg 1141 ccgctgcctt cggaggcgtc tactccaggc atccctacga ctggcccttc aatgcggtga 1201 cccacaagga ggcggcctcg gtgaattccg gctggtggga catgcacagt gccgccggct 1261 cctggctgga catgggcggt gccggcatgc actccacgat ggccaactat gccagcgaga 1321 actacagctc ggcgctgagt cactcgctcc tgggatcggg acagcacctc ctgcaggaca 1381 cctacaagag catgttgccg ggtcagggag ttggcgtggg agtaggagta ggagtgggcg 1441 tgggaatggg tggcttctcc ctgccgcaca gttctccctc ggcggcggcg gcggcggcag 1501 cggccacagc ggcggcagca gcaggttcac cccagggtgg ctcaccttcg acaccctcgc 1561 cgcgttcgca gcgacgctat gctggaaggg ccacctgtga ttgccccaat tgccaggagg 1621 ccgagagact cggtcccgct ggcgttcatc tgcgcaagaa gaacatccat tcgtgccaca 1681 tacctggttg tggcaaggtc tacgggaaaa cctcccatct gaaggcccat ctgaggtggc 1741 acaccggcga gcgtcccttt gtgtgcaact ggctgttctg cggcaagcgc ttcacgcgct 1801 ccgacgagct gcaacggcac ttgaggacgc ataccggcga gaagcgcttc gcttgccccg 1861 tgtgcaacaa gcgcttcatg cgcagcgacc atttggccaa gcacgtgaag acgcacaatg 1921 gcaatggcac ctcctcgggc catcagtcca gccataatgg acacggtggt ggcctgaaga 1981 agggctcctc cgagtcgtgc agcgattcgg aggaggccgc caaccagtcg ggcgagtcca 2041 acgggctggg cggcgtgggc agtggccctc agacgggcgg ggccggcggc ggcgggggtg 2101 gcgtctccgg cggttcggga acggtaacgg gtggtagtgg tagtggcagc tcctccggga 2161 gcagcagcaa tgccaattca accaactcga attccgtttc cggttccggc ggaggcagcc 2221 atcccggcac cccgacctcg ctgcacgcgc acagcgccaa tggcacgtcc agcagcctgc 2281 tgggcggcgg tctgcacctg gccacgccgc accaaatggt cgccgcgggc ggttcgccgg 2341 tgatgctaca ccagcaacag cagcaacagc agcagcagca gcaacagcag cagcaacagc 2401 agcaacacca ccagcagcag cagcaacatc tgcaacagca gcagcacctg caacagcagc 2461 agcaacacca ccatcagcaa ttcggtcagc aacagcagca gcagcagcat catgcccacc 2521 acctgcacca ccatgcccac cactcgcacc acctggccac cggtggttcg cccggtttgg 2581 atcccagctc cctggtggac ataaagccac ccatggtttg aggatcgctg ggacccttcc 2641 tgttcaccaa ctaagcgaag ggttcccatt acaaaatcta attataaata tataatagaa 2701 aaccctatat catttcgaaa ctagctatct tgcggttgta catatagcca gcagatgtct 2761 gtaaatattc ataaatatgc gtgtctatcg aacagctaat cacagcacta aatatctatt 2821 gcttatagcc tattgctagg aactaagcca ttttttctag aatatctaga acatctagag 2881 agcgagtgtg tgtttttttt ttgtattttt tttactagcc ctatggatat gtaatttttt 2941 tcatagcccc taagcataaa tatatatata tatatataaa cgaaattaac caagagacaa 3001 gcttcgagca ccatgaaaaa aagaagaaaa acaattatgc aattctaaaa acgaaaaaaa 3061 cacctaaaat atattattat aaatatcgaa agagagagag agcggagggt taagcatcat 3121 aaatatattt ctagtccaat tatgaagtgt gagcgaacca aaattgtaaa aaacaaagca 3181 aaataaaaaa aacgtaacac aggggtgtgt ggtattcgaa ctcgcggccc tctgtaaatt 3241 agcacatgtc cctcaattat ttttgctaag cccaacggac gaggacgagg atccagcgag 3301 gatatcttag acgctagtgc tttaatcgat cccaactaag aaaagaaaaa gaaaaacgaa 3361 aagaaaagct aaactaaatg tgtttttgtt gttttatttg aacctaggct tagagcagag 3421 atacttagat acttagcaca cacaaaacaa aacaaaacaa aatgaaaaag cataaaaaac 3481 aaagcacaga aaataaagaa aaggatccgc aatttatcat cttcgattac ttttttttgt 3541 ctatgtaaat taattattta aaatacgaat aaactattta aatttcattc aaaataaatg 3601 tacaa