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LOCUS XM_070219220 2587 bp mRNA linear INV 09-DEC-2024 (Tango5), transcript variant X2, mRNA. ACCESSION XM_070219220 VERSION XM_070219220.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2587 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2587 /gene="Tango5" /note="Transport and Golgi organization 5; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108060916" CDS 253..1728 /gene="Tango5" /codon_start=1 /product="vacuole membrane protein 1 isoform X1" /protein_id="XP_070075321.1" /db_xref="GeneID:108060916" /translation="MSQHSKKDGSSSGSGNGSGSHAGNNKSHKRQAANGSLKAQSTSH SHSQTPSKSPSGSSNSNSSSSSRSLSGSSMQAPPPTKKNQKDKQRERERAERSQLVLW RRPLQTTKYCGLELAALLRTWSTRLLQQRLLLAALIVLGIVFSVIYKIDGPHQLAIEF VRRNTWFFVYWLGLGVLSSVGLGTGLHTFLLYLGPHIASVTLAAYECNSLRFPQPPYP DDIICPEEPYDKRVPNIWSIMSKVRMEAFLWGAGTALGELPPYFMAKAARLSGYDPED AEELAEFEALNAKRHQKNLSLMDKGKLFMERVVERVGFFGILACASIPNPLFDLAGIT CGHFLVPFWTFFGATLIGKAVIKMHIQKIFVIIAFNETLIERAVDLLASLPLLGHKLQ EPFKSFLKNQKQRLHRQQRGSGGSASGAGDSGNLLSRIFETFVIGMVCYFVVSIVNSL AQSYHKRLHKKPATGAATTPTRLAAGAAPSKKAGKQKALRD" misc_feature <1168..1317 /gene="Tango5" /note="SNARE associated Golgi protein; Region: SNARE_assoc; cl00429" /db_xref="CDD:469768" polyA_site 2587 /gene="Tango5" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gaaattagag tagctgctac actttgcacc ctcgtcagta ggagcttatc agtttatcag 61 tgccgcagac ggggcgtttt tatttggatt ttgtgcgtgc cggcgaacgg tttaaatttc 121 aaattctctt caaaattccg ctcgaaattc ccgatttccc tgcctaattc gaaccgattc 181 gactaaccga ttgggcattc tccatttttt atgtttccaa acaacacagc cgcttgcaag 241 ccaaccgctt aaatgtcaca acactcgaaa aaggacggca gcagtagcgg aagcggtaac 301 ggcagcggta gccatgccgg caacaacaag agccacaagc ggcaggcggc caacggcagt 361 ctgaaggcac agtcaacctc ccactcccac agccaaacgc cctcgaaatc gcccagcggc 421 agtagtaata gcaacagtag cagcagcagc agaagcctca gcgggagcag catgcaggct 481 cctcctccga cgaagaagaa ccaaaaagac aagcagcgcg aaagggagcg cgcggaacgc 541 agccagctgg tcctctggcg acgtcccctg cagaccacca agtactgcgg cctcgagctg 601 gccgccttgc tgcgcacgtg gagcaccaga ctgctgcagc agcgactcct gctggccgcc 661 ctgatagtat taggcatcgt atttagcgta atttacaaaa tagacggccc ccaccagttg 721 gccattgagt ttgtgcgccg gaacacctgg ttcttcgtct actggctcgg cctgggcgtc 781 ctgtcgtcgg tgggcctggg caccgggctg cacaccttcc tgctctactt gggcccgcac 841 atagccagcg tcacgctggc cgcctacgag tgcaactccc tgcgcttccc gcagccaccg 901 tatccagatg acatcatctg tcccgaggag ccgtacgaca agcgggtgcc gaacatctgg 961 tccatcatgt ccaaggtgcg catggaggcc ttcctctggg gcgccggcac agcgctgggc 1021 gagctgccgc cttacttcat ggccaaggcg gcgaggttgt cgggctacga tcccgaggac 1081 gccgaggagc tggccgagtt cgaggctctc aacgcgaagc gccaccaaaa gaacctcagt 1141 ctcatggaca agggcaagct cttcatggag cgcgtcgtgg agcgcgtcgg attcttcggc 1201 atcctggcct gtgcaagcat tcccaatccc ctgttcgatc tggccggaat aacctgcggc 1261 cacttcctgg tgccattctg gacgttcttc ggggccacgc tgatcggcaa ggcggtgatc 1321 aagatgcaca tccagaagat cttcgtgatc atcgccttta atgagacgct gatcgagcgg 1381 gccgtcgatc tgttggcctc gctgccgctg ctcggccaca agctgcagga gccgttcaag 1441 tccttcctga agaaccagaa gcagcgtctg catcgccagc agcgtggatc cggtggctcg 1501 gcatccggag cgggcgattc gggcaatctg ctgtccagga tcttcgagac gttcgtcatc 1561 ggaatggtgt gctacttcgt ggtgtccatc gttaactccc tggcccagag ctaccacaag 1621 cggctgcaca aaaagccggc gacgggggct gcgaccacgc ccactcgcct ggcggcgggg 1681 gcggcgccga gcaagaaggc gggaaagcag aaagctttac gggactagag aatcggtgga 1741 agtgtttttc tgttgatcgt tgccccccaa aaacccaaaa tcatacccct ctttcgttta 1801 aattattttg tttattgcgg ccttcgctct tagtcaaatt ataaactgta tgtgagtgtg 1861 accgcgagag gaggagacgg ccggaaagcc agaggaattt accttgtaga ctagattagg 1921 aaaaacagaa gagtaacgca gcagatgcag tagcagcagc cacaacaata gccagagcag 1981 aatatatttt agtaatgtac aagaagaaaa ccctagcaat tttccgcgcg agtatcgttt 2041 cgatgtagcg aaagtgagag ggacgccgct agtcgctagt cgcgcctaat gaaaagcaaa 2101 ttgtgcaaaa gttgtgcaaa agacaaacaa gccagagcaa acagagagcc cgaaataaaa 2161 ataaaattta gccaggagcg agtggaaagt ataggaaaga tttaaaaagt gctgaaaaat 2221 aaatgaaata tggatataca aattaaagcc ggacgtatgc ctcaatttag gtgggatttc 2281 agttgggcga aaatgattac tcccagcata agcctggctt aattaaagat taactgctga 2341 aaaataataa acgatatatg gatacagaaa caaaagcctg caaatgtatg tacgtatcag 2401 tttacaagga actgaagtgg tttagctgga aaggcagtcg attaacacga ggatgagtaa 2461 gctgtcctcg cgatttccgg ctaaacccaa taattaatac aaagaaaaca ttaaactgaa 2521 tatagcgtgg gaggaaacag atgaaataac taagtgcaaa ttaataaata aataatggaa 2581 atacaaa