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LOCUS XM_070219200 8304 bp mRNA linear INV 09-DEC-2024 calcium-activated potassium channel (SK), transcript variant X11, mRNA. ACCESSION XM_070219200 VERSION XM_070219200.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8304 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8304 /gene="SK" /note="small conductance calcium-activated potassium channel; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108058158" CDS 753..2909 /gene="SK" /codon_start=1 /product="small conductance calcium-activated potassium channel protein isoform X10" /protein_id="XP_070075301.1" /db_xref="GeneID:108058158" /translation="MSPAFCMDNDCNQGALNRKCQATPPPPTPTPMPVVVSTTSSTSG TPSPTVTPFPSPTPSRSPSLTLMMMPQIPQTQTQTQMWQQQQRLPLMTRTGSVGGATS AARRNSLWLETLRNTRKLSYANERPILLRKPASTLSIPGSMKTPSIANREQISSGCNE EAAEALVGIHSDYPRYEMYMEERALTGGNTSRKPSTNSAKHKPNVGYRLGKRKALFEK RKRISDYALVMGMFGIIVMVIENELSSAGVYTKASFYSTALKTLISVSTVILLGLIVA YHALEVQLFMIDNCADDWRIAMTWQRISQIGLELFICAIHPIPGEYYFQWTTKLANKN KTIGTEMVPYDVALSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVL KTLMTICPGTVLLVFMVSLWIIASWTLRQCERFHDEEHANLLNAMWLIAITFLSVGFG DIVPNTYCGRGIAVSTGIMGAGCTALLVAVVSRKLELTRAEKHVHNFMMDTQLTKRLK NAAANVLRETWLIYKHTRLVKRVNPGRVRTHQRKFLLAIYALRKVKMDQRKLMDNANT ITDMAKTQNTVYEIISDMSSRQDAIEERLTNLEDKMQSIQEHMESLPDLLSRCLTQHQ ERIEQRRNFLHPDTAAVAPIQAPTPQSMFNAAPMLFPHSRSVPSSNNAAATYHWPTSP ILPPISSRTPHLVPDTHMPSNGSAVNSYASSNKYGS" misc_feature 1377..1709 /gene="SK" /note="Calcium-activated SK potassium channel; Region: SK_channel; pfam03530" /db_xref="CDD:460958" misc_feature 1971..2210 /gene="SK" /note="Ion channel; Region: Ion_trans_2; pfam07885" /db_xref="CDD:462301" misc_feature 2250..2474 /gene="SK" /note="Calmodulin binding domain; Region: CaMBD; pfam02888" /db_xref="CDD:460739" polyA_site 8304 /gene="SK" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gaagggatcg ctctagattt gggaactctc gttctctgtc gctcattttc cagatcggtt 61 gcggatcgga tccgatcgga tcggtcaata atggacgtga acggcttgtg gaaatgctga 121 attgtgtctg cttccccgat tctgtttaca ttctggacaa ttacgcagtc gaaagttggc 181 cagaaaaatc ccaattcaaa tcaaaattaa atcaaaaccc atcggttttc cgtcggttgc 241 ggttcatggt tcatttatat tgtgttgcta aaaaaaacaa aaatcttttt ttttctgtgc 301 gtgcttggtt gacaaagtga aatgtgaaat ataatgtatt ccaggaagaa agcgtataaa 361 tatcattgtt taaacatttc ggcgttaacc tgtaaccggc aagatctgag aattgctaat 421 taaaataaac aatgtacttg tttccttgaa aatcttttaa taataattaa ggcaaaatgt 481 ttgtgtgtac ttgtaatttt cctgaaaaca caaatatttg ccttccatta agaaaacaaa 541 aacagtgacg ataacaaaga aaacggtttc ttaaatacgt ttcattcttc gctcgttcca 601 taaacctggg atttctattg atctatcaaa ttaaaaaaaa aaaaacaaaa ttaagtgaaa 661 aaaaactgat gatcttattc aattaagaat tattttttgc gggttccccc caaaaaaaaa 721 aaactctttt cgatcttgag gtcaagcaga gcatgtcgcc ggccttctgc atggataacg 781 attgtaatca gggcgctctc aataggaaat gccaggccac gcccccaccg cccacgccca 841 cgcccatgcc ggtggtcgtg tcgacgacgt catcgacctc tggcaccccc tccccaaccg 901 taacgccctt cccctcgccc accccctcgc ggtcaccgtc gctgacgctc atgatgatgc 961 cgcagatacc gcaaacgcaa acgcagacgc aaatgtggca acaacagcag cggctgccgc 1021 tgatgacgcg aacgggcagc gtcggtggcg ccacgagtgc cgcccgcagg aactcccttt 1081 ggcttgaaac gctgcgcaac acacgcaagc tgtcctacgc caacgagcga cccattctgc 1141 tccgcaaacc ggcgtcgaca ctctcaattc ctggctcgat gaaaacacct tccattgcga 1201 accgggaaca gatctcatct ggatgcaacg aagaagcggc cgaggcacta gtgggtatcc 1261 actcagacta ccctaggtat gaaatgtata tggaagaacg tgctcttact ggcggcaata 1321 cgtccaggaa gccatcaaca aactcggcca aacacaaacc caatgtgggc tatcgcctgg 1381 gcaagaggaa agccctcttc gagaagcgca aacggatcag cgattacgcc ctggtcatgg 1441 gcatgttcgg gatcatcgtg atggtaatcg aaaacgagct gagcagtgcc ggtgtctaca 1501 caaaggcatc gttctactcg acagcgttaa aaaccttaat atctgtttcg actgtgattc 1561 ttttaggact tatagtagct taccatgctt tggaagtgca gttattcatg atagataact 1621 gcgccgacga ttggaggatc gcaatgacat ggcaacgaat tagtcaaata gggttagaac 1681 tttttatatg cgctatacat ccaattcctg gcgaatacta tttccagtgg acgacgaaat 1741 tggccaataa gaataaaaca attggcaccg aaatggtgcc atatgacgta gctttatcat 1801 tacctatgtt ccttcgatta tatttaatct gccgcgtaat gctgctgcat tcaaagctat 1861 tcacagacgc atcatcacgg agcattggcg ctctcaatag gattaatttt aacacaagat 1921 tcgttttaaa aactctaatg acaatatgcc cgggaacggt tctattggtc ttcatggtct 1981 cgctgtggat catcgcatcc tggacgctgc gtcagtgcga aagatttcat gatgaagaac 2041 atgcgaatct tttgaatgca atgtggctga tagcgataac atttttgagt gttggtttcg 2101 gtgatattgt tccgaatacg tactgtggac gtggtatcgc tgtcagtaca ggaataatgg 2161 gcgccggctg tacggctcta ctagtggccg tagtttcccg gaaactggag ctgacccgtg 2221 ccgagaagca tgtgcacaac ttcatgatgg acacgcagtt gaccaaacgg ctgaaaaatg 2281 ctgcggcgaa tgttctgcgt gaaacttggc tcatttacaa acatacaaga ctagtaaaac 2341 gggttaatcc cggccgtgta agaacccacc aaagaaagtt ccttctagct atatatgcgt 2401 tgcgaaaagt taaaatggat cagcgcaaac taatggataa tgcaaacaca ataactgaca 2461 tggccaagac acaaaacacg gtctacgaga taatatcgga catgtctagc cgtcaggatg 2521 ccatcgagga gcgcctaacc aacctggagg acaaaatgca gagcatacaa gagcacatgg 2581 aaagccttcc agacctattg tctcgatgtc tgacccagca ccaggagcgg atcgagcagc 2641 ggcggaactt tttacatcct gacacagctg cagtggcccc cattcaggcg ccaacgcccc 2701 aatcgatgtt caatgcggcg cccatgctgt tcccccattc tagaagtgtt ccctcatcca 2761 ataacgccgc tgctacttac cattggccaa caagccctat tttgccacct atatctagta 2821 gaacaccaca tttagtgcct gatactcaca tgccatcaaa tggatctgca gttaatagct 2881 acgcatcttc caacaaatac ggcagctgaa tatcagaaag agagcgctcc aactccgtga 2941 ttaacatcga gatgctaaca ataaggccgg atcgatgctg gccaacatcc tcatcaacat 3001 caacatcaaa cgcaccccag aaatcagcat taccatcaac atcaacatca atgtctacgt 3061 caaaggcaaa gtctaaaccc gaattcgaaa tggccgagac agcgctcagg caacgtgtgc 3121 tatcgccgtc gttatcgtta ttgaaatcat cgtcacaaga ccgcaatttg catcaaataa 3181 gtgggcggca aatggaaatg gaaatggcaa tggaaagaga gatagtacca atatcaatac 3241 caataccagt gatacccgaa gatgccgaat cgaatacgaa tagcaacagt tcgcccgatc 3301 agcaaaatgt gcagataagt acagtaccgc catcgagttc aacgcctgct ttcggaacta 3361 gcggtgcaac tagcgatggc attgtcaaat cgataacgat gaacgaaccg atgacgacgg 3421 agagcggcaa accgattgcc tcgaataagt ttactaggaa aagagaacgt gtatgcaata 3481 atagtagtta atagtgctag gctatagtga tagtaataat agaggtaata gtaatattag 3541 taattctaca agtcgaattt cgaactcggc cttttgtaaa taagcctctt cgagatgaga 3601 aaaaaagtca aatgttagca tatacatata atatacataa aaccacccac acacacacac 3661 ttcctatata tctgtataac tgtatggatg tatagcactc cccgaaaacg gaaaaagaaa 3721 accccttaaa aatatcccaa aacaagaaaa ccaaaaaaca ataacagaaa accaaacaga 3781 atatatgtat acatatatat acaattgtgt aaattttttt ttctaagttt taggctaatt 3841 gtatttgtaa tatttcacct tgggccaagg cagcctgtac ttgcatacta aaattcatat 3901 accataacat agcatagagt gtgtgtgcat gtgtgaatgc gagtgtacag ggcgagaatg 3961 gagagtagaa ggtaaggtca taggacatac aaacatatat agatcgtagg acaccagcat 4021 gtacgagtag aatcgaagta tataaacgaa ttacgctcag caaggcagaa atagcaatag 4081 taaacctgga aaatctggca ccgtcagtat atcccttgta gaaccgcaat cctaactcaa 4141 atgggccaac gagatcccct gctgcccgtt gcactttcct ttccgttgca tatccaacaa 4201 ccaaccagca atacatccac aaacatggca aattctagtg tccgtctgtc tcaaatttgt 4261 gtgtaaatat atatgcatat atagcagtat atatatatgt atccgaagga tgtgtgtctg 4321 acctgactgt gtgtaaccca tgcgacccat acaaaccacc acccccaaca attatatgaa 4381 aaacgaagaa gaaaaaacaa aaaccccaaa cccagaacaa tgaaaaacta tctaactgta 4441 aaatgtatgt tacgagattt agaaaaaaca gcgaaaccag aaaaccaaat actaagagat 4501 ataaactaaa gccgaataaa agaaaaactg tggaaaaaac gcaaaaaccg aggataaaga 4561 aaaacttaca cacaaaaatg agagttctta cttaacatct actagctctg gctttaacta 4621 aacttacgaa acatgtttaa aggaaacaag tttgttgttg tcttcttttt ctacgcatat 4681 attacaatat atatagtata tatacatata tattttcgtt gttgttgttt ttggcctatt 4741 cttttctacc aagaattatg aactcaatta agaacctgaa tagctttcga aggaaattga 4801 agatgaagac gatgatgatg atgatgatat aatgatatag tagcgtagac aaaaccaaga 4861 aacaaatgat atgaaatcga aaaacgaact atttagtata gtctacatac taaagtgaac 4921 aattttaatt gcaattttgt aacatattaa aagtaattcg cattaattta caaaaactag 4981 ctggtaaatg tgtaacaacg gaacaaacta caagctccag atggaaaata atagaaccga 5041 aatggggaga agcgaattga aattgaattg aaattgaagt ggaggtggaa ctggaaatgg 5101 aaatggaaat gagtagagca gattagtgta gacataatag cagaagtggc cgagctacgt 5161 aaagattttc taaagattct aagaggaaca ttatatatac tatatactta ctataaagta 5221 ttaactgaga gcatcgaagt tatttaaaac caaatgaaaa acgaatgcaa aaagaaaaag 5281 caagcaatta ggtaatatgc aaccttctaa cgctttgtta ggatcccatc ccaaatggaa 5341 ggcaaaagag atatacaact gaattccccg aatagtgccc ccacctcccc agaatctccc 5401 gttcccatca ccccaaccaa aaatccccca aagtcagcaa gacagactct gcatattatt 5461 atacagaacc agggccagaa aggatcaaaa tatctgtaaa ctatagatta tatagccgta 5521 ggattcagtc cacttaagcc aactaataaa agtatagaag ttttgccaca ctgatttacc 5581 acatctccaa aacccctggc ttcagtttgt ttctatgaaa attaaaaccc cacaaccata 5641 aagtttccca attgtctgat agatcttaac ttatatacat acaatgaaaa tcccagacca 5701 gcaaaggagt caaaggagaa caaacaacaa acaagaaaca aacaaaccaa ctaaatgaac 5761 ccttaaacaa atgtgtgtat acctatttat aatattgaat atttaaattg aaaagaacgt 5821 tcaagactgc tgtcaaaata gctttatcac aataaataac aaagatctac acaagacgac 5881 acacaccaaa cagaacagaa cagaacagat cagaacaaca atactaaact gatcgataag 5941 tatcgtttat cgaatcggaa cagacaccta aagatacaca caacacacag attctgatac 6001 gagatatgga atgcgcccag ctttaacgtt atgtattcgt gcatatttgg gtttcaactc 6061 tacaacaact taaaacgaat acgcaaaaga atactgaaca aagatcgata tacgattaac 6121 gattaacaat taacgatata cgaatcaaat caaatcgaat tgaattgaat aattggtaca 6181 agatcaaatt cccgtttgaa ctggtttcct aagccccaca aaataccttt aaacacgaga 6241 taaaaaccaa aaactttgat atgagggacc gaatttccaa agacaggtct ttattataca 6301 aaaaaccgaa caacctaaaa ccaaaagcaa aagcaaacca actaacgaag aattcctaca 6361 aaaaaaaaca aaacccataa cagtaacaat ttataatacc gaagattttt agccgctttt 6421 gagctggatt atgaaaagaa aaaggaatag aaaaaggaaa agagaaaaac acaaataagg 6481 atcgtattgc acaatgtcct tggttgactt ccgtaacatc atatagacac aggtccgagt 6541 cccacgtcca gttttagtgt gtattgtgta tttccgttca ccttaatcag aattgaatcg 6601 aaaaatatat caactttctt ttcttcagcg aatcatagag ctcaaggggt acttcgagaa 6661 tcacgcttca accgaaactc ttctagccaa accaggtcca atagaactta catacatata 6721 gcccagccaa tgccaatgct acaaaccaaa aaaaaaaatg gattcgagtt ttcgaaaacg 6781 tatcgaaccg gattatgacg aaaagggcag ccattttggt gaatttacac gctaggaact 6841 agaaaagggt cctcccaaac accaaatacc ccccaaactc cataacccct ccccctcccc 6901 caccccctgt gcgcccaact agatcgaggt atgcaaaata tataaggtta catatacaat 6961 atctagatat acaacacaca tatactcgta tatacatgta cagacggtct atgaggtata 7021 taccaaaccc aagaaagccc aaaaaccaaa aaccccacac taataagatc atatttgact 7081 ttatatgtat tatagtaatg tattcagtag ctaaatcgaa agccgaagca aagaccaatt 7141 tattaacaac aaactaataa gataaccccc aaaatggaaa acaattatta tgttaaatta 7201 aaccattaaa atctaagagg gaggcaaaac aattttttta ttgaaaaaaa aaaacaagaa 7261 aaacaaaaca aaagaaaaca aagtaaacta gaatgcattg catgaattaa ataaagagaa 7321 aaaaactaat agaaacccaa aacttaacta acgaaggtca actaaaacta aacttaaact 7381 taacctactc taatgctaaa attgaagtaa aattaactta aaaccactaa aaggaaaaaa 7441 gatttaattt ctaaaagaaa taaagtaaga aactaaaaca aagtaaacag aaaaaaattc 7501 agtggctaat gaaatagttt attttgaatt tactgtattg tatatttaaa tttaaacaaa 7561 aaagggaaac cccaaacaaa atatattgtt atatcttatc gaggaaccgt gttttgcaaa 7621 agctttaata tttagggtgc ctacatttgc taaattagta ttttacgatt taaaacttaa 7681 agaaaaaaca aaacaaatac taaaaccaac acctacatac acgaaatagt ataaagcttg 7741 attgaaaaac gaacccaaaa agttaggaac gtgaatttcc aaaacgatta cactgaacaa 7801 aaagaaaacc gaaaccaaaa caaattaaga acaactaaca gctaaagcaa atattgtatt 7861 tgtatttgag atatgaattt taagaatgtt tattagactt acggttggtt attttgtata 7921 catatatata ttatatgtat tatgtatgta gtataaactg atctgatctg acgacgattg 7981 taattgtttt tttttttgct cattaagcat ttacctcata agaattccca ctatttatag 8041 caaatttacc atattacata aaatcaattg ctgtactgtt ataatgtaca accccaagga 8101 aacgatatgt aggacgagga agaaccataa caagagagag aaatcgataa aagtcgaggg 8161 gcaagaggaa aactcataaa actgtaaatt attaattaat gaagaaaaaa ccaaagagaa 8221 taattgaaat tttaacaata ataaagggct ttgtatgaaa gaaaaacaaa caaaaactga 8281 ataaaaatga aataaaagta acaa