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LOCUS XM_070219199 5847 bp mRNA linear INV 09-DEC-2024 calcium-activated potassium channel (SK), transcript variant X9, mRNA. ACCESSION XM_070219199 VERSION XM_070219199.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5847 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5847 /gene="SK" /note="small conductance calcium-activated potassium channel; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108058158" CDS 714..3077 /gene="SK" /codon_start=1 /product="small conductance calcium-activated potassium channel protein isoform X9" /protein_id="XP_070075300.1" /db_xref="GeneID:108058158" /translation="MSIQKLNDTTNSGYVSSEETDSLLVSSSNPSKGGGRTALLRQVK SSSTNGPTTGASTSSSGSVTGSGTGTGSGSGGGSGSVSASGSNSTAGGGTGASKPTLM RQDRTSTYLTSPQQSQHVRMGSEESMRGGGGGGGGGATAHDEDVEQGLQVRSSIVPDI EVHEEDQERGSTTTTTTITTNNQQPTISIMNLSLKPGESHSHSHSSSPGSHPNLGTSS YQNLASSIPPSVPSRCRACRNCSRRASTTPTTLIDRSASRDSVKSAFQQGNLSGSMAI CISNSALPQQQQQQQYHLQQQQHYQLQQQHLQHQQHLQQQQQQQVPPVLITSSPTNGS RIIRQSSQPESSSTAICCGPHSACVGHAHSHSHTVPNVSLKQLRESSGDGIAGIAADS LRINGGMRPFKQGVLLMPRTLSDSRKLRLRRAFTEATNETLQCSKMLRKPASTLSIPG SMKTPSIANREQISSGCNEEAAEALVGIHSDYPRYEMYMEERALTGGNTSRKPSTNSA KHKPNVGYRLGKRKALFEKRKRISDYALVMGMFGIIVMVIENELSSAGVYTKASFYST ALKTLISVSTVILLGLIVAYHALEVQVRLFMIDNCADDWRIAMTWQRISQIGLELFIC AIHPIPGEYYFQWTTKLANKNKTIGTEMVPYDVALSLPMFLRLYLICRVMLLHSKLFT DASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVSLWIIASWTLRQCERFHDEE HANLLNSMWLTAITFLCVGYGDIVPNTYCGRGITLTCGMVVSISSKT" misc_feature 2265..2603 /gene="SK" /note="Calcium-activated SK potassium channel; Region: SK_channel; pfam03530" /db_xref="CDD:460958" misc_feature 2865..>3035 /gene="SK" /note="Ion channel; Region: Ion_trans_2; pfam07885" /db_xref="CDD:462301" ORIGIN 1 caaacaacac taacggaaac atcaacgtga aagcgagacg gacgccctcc gtcccgttat 61 atgctgtgtc tgtctgtctg tctgtgtgtt gagagttcta cgtcgcgcac tccaaaaaaa 121 aaaaaaacca aaaaaaaaaa tcaaaaactt taacactcgc atacacactg gcacacacaa 181 acatacacac acatacatta atatatatag ttaaaaaaaa attatataca aaaagaaaag 241 aagtgcaaga aaaataagcg cccactgcgg ccaatggaaa tgccaaagaa aatgcagcag 301 caacaaattc gacaacaaac gcaaattcta cagcaacaac aacaacaaca agcacagcca 361 cagcagcaac aactgcagtt ccccaataca taggtccacc gattttccgt ctttgtcgcg 421 cgcgttcaca cacacaaaca cagtcacaca ctgggacaca tgcatgtgca taaatggcaa 481 tatggacgaa gagcagcagc agcatttgcc ttgtattggt ataccagcac agtgacacgc 541 gcgtgccaaa tattgccgat tttatcacac gaacaacaac aacaacaaca actgcaacaa 601 cagcaacacc agcgggacca gctattaact aaaggagcca ttacaacaac aaagaccata 661 gcaacaacaa caagaacaac gaacattgct ggaaggcgtc gcaaaatatc aaaatgtcaa 721 ttcagaagct aaacgacacc accaactcgg gctacgtgag ttccgaggag acggactcgc 781 tgctggtgag cagctcgaat ccctccaagg ggggcggccg gacggctctg ctgcgccagg 841 tgaagagtag ctccacgaat ggcccgacga cgggggcatc cacctcgtcg tcgggctcgg 901 tgacgggatc gggaacagga actggttctg gttccggtgg aggatcagga tctgtatcgg 961 catcgggctc gaattcgaca gccggcggag gaactggggc ttccaagcca acattaatgc 1021 gccaggatcg cacttccaca tacctaacga gtccccagca atcgcagcat gtgcgaatgg 1081 gctccgagga gagtatgaga ggtggaggag gaggaggcgg aggaggagcc accgcccacg 1141 acgaggatgt ggagcaggga ctgcaggtcc gcagcagcat agtgcctgac attgaagtac 1201 acgaagagga ccaagaaagg ggatcgacaa cgaccacgac cacgatcacg accaataacc 1261 aacaaccgac catatcaatt atgaatttaa gcctgaagcc cggcgagagc catagccata 1321 gccacagctc cagcccgggc agtcatccca acttgggcac ctcatcatat cagaacctgg 1381 cctcgagcat accgcccagt gtgcccagtc gctgccgggc ctgtcgcaat tgcagccgac 1441 gtgcttccac cacgcccacc accctcatcg atcgctccgc ctcccgcgat agtgtgaaaa 1501 gtgccttcca gcagggcaat ctcagtggct cgatggccat ttgtatatcg aactccgcgc 1561 tgccgcaaca gcagcagcag cagcaatatc acctgcaaca gcagcaacac tatcaattgc 1621 agcagcaaca cctgcagcat cagcaacatc tgcagcagca gcagcagcaa caggtgccgc 1681 ccgttttgat cacctcatcg ccaacgaacg gatcccggat tatacggcag agctcacagc 1741 cggaatcgag cagcacggcg atctgctgcg gaccccattc cgcctgcgtc ggccacgccc 1801 actcgcactc gcacacggtg cccaatgtct cgctgaagca actgcgcgaa agttccggcg 1861 atggaatcgc gggcattgca gccgactccc tgcggatcaa tgggggcatg cggcccttca 1921 agcagggcgt tcttctaatg cctcgcacat tgtctgatag ccgaaagttg cgccttcgca 1981 gagccttcac cgaggccact aacgaaacgc tccaatgctc caaaatgctc cgcaaaccgg 2041 cgtcgacact ctcaattcct ggctcgatga aaacaccttc cattgcgaac cgggaacaga 2101 tctcatctgg atgcaacgaa gaagcggccg aggcactagt gggtatccac tcagactacc 2161 ctaggtatga aatgtatatg gaagaacgtg ctcttactgg cggcaatacg tccaggaagc 2221 catcaacaaa ctcggccaaa cacaaaccca atgtgggcta tcgcctgggc aagaggaaag 2281 ccctcttcga gaagcgcaaa cggatcagcg attacgccct ggtcatgggc atgttcggga 2341 tcatcgtgat ggtaatcgaa aacgagctga gcagtgccgg tgtctacaca aaggcatcgt 2401 tctactcgac agcgttaaaa accttaatat ctgtttcgac tgtgattctt ttaggactta 2461 tagtagctta ccatgctttg gaagtgcagg tgagattatt catgatagat aactgcgccg 2521 acgattggag gatcgcaatg acatggcaac gaattagtca aatagggtta gaacttttta 2581 tatgcgctat acatccaatt cctggcgaat actatttcca gtggacgacg aaattggcca 2641 ataagaataa aacaattggc accgaaatgg tgccatatga cgtagcttta tcattaccta 2701 tgttccttcg attatattta atctgccgcg taatgctgct gcattcaaag ctattcacag 2761 acgcatcatc acggagcatt ggcgctctca ataggattaa ttttaacaca agattcgttt 2821 taaaaactct aatgacaata tgcccgggaa cggttctatt ggtcttcatg gtctcgctgt 2881 ggatcatcgc atcctggacg ctgcgtcagt gcgaaaggtt ccacgatgag gagcacgcga 2941 atttgctaaa ctccatgtgg ctaacggcca tcacatttct gtgtgtcggc tacggcgaca 3001 ttgtgccaaa cacgtactgt ggacgcggta tcaccctcac ctgcggcatg gtggtaagta 3061 tttcctcaaa aacctaaaaa aaaaaacaaa aaatcaaaaa cctcaaaaga aatgaccaaa 3121 aaaaatacaa agactcccaa aaactccatt tatgataccg aaaaatacct taaatatacc 3181 aaaaacaaac taaatcaaaa taaataccaa aaatagaaca gtacagaaca gaacagttgc 3241 aaagataaaa cagaacagaa aaaattgaaa atacatctat ctatatccaa acaataaaga 3301 aatcctataa taagataaac aataaaacta caacaacaac aagtacatac atcatcatca 3361 acaaaaacag caacaacaac agcaaacagc aaactttcat gcataaaaat atgagaaatc 3421 aaaacccatc gcaagcagag aagaagtagt ataaagagga gaaggtggag aaggaggagg 3481 aggaggtgga ggagtggaag gatgttaagg gggatggggg gtggtggggg cccagaaaag 3541 tagccgccat tgaggcgcca ccgaaaaaaa ggaaaccaaa acccccgctc cgcacaaaag 3601 tacatacata tatatagtat tttatagtaa ttgtacctgc caaatcaacc gatacacacg 3661 cacgcacaca gatctctgta caccgaaaaa aagatgtcag atttggatgg gtagaatttt 3721 aaaaattcaa ttccaacacg aaaaagccag tgaaatagaa aaaagctttc tgatttctga 3781 aagaacccat tggttcaatc cgaatttctt aaggaaagaa atctaaaacg tattgtatgt 3841 accataaata ttagttataa ttttatgtca ataccacata tattcatttt catcgacaat 3901 acgcttacga tccatttaat aataataatt attttaaata tcagtggtac tcaaaggcaa 3961 cacacttttt ttttctgtgt acgtgtgcgg gcgtattccc tgacctatct tctcgatgtt 4021 ctcgagttcg agttcccctg cccccttgtc gtcgccacca ccaagttata aattcaaatt 4081 caaatatcca aaatccgttt tgatggaggc tccacccaca caaacaagag gaaaaaggca 4141 aaaagaaaaa atagacaaaa aacacatatt catttttcgt agcatacatt tcagcgcaca 4201 tattttagat gccgttttgt ctgcccaaat cgtcgccaaa acaacaaaag aaaaaaacag 4261 aaaatccgaa ataaactgaa aaaagcggaa agcgaatgtc aagcaatagt tccatatctg 4321 tatacccatc ccgctctatc tggttttttg tttcagtcag gccgcgatta atacaagaat 4381 acgtacatat atacaagcac attacattcc cacatccacc cacccacaca cacacacact 4441 ctggcaatct gttgtaaatc atcaccaaaa aaaatcttac cacccacttt gtgtgcgtgt 4501 gtgtgtgtgt gcttactgta ttataaacat aagcatacat tctatatata tttaaatata 4561 tgtacataat caccatgtgt gcctgtgtgt gtgtgtgtat ttttgcagca ttaaagagcg 4621 cagataacaa tgtaactgtt ctttttgtcc ttttttctga cagcgaaaac taaaacaaaa 4681 aatcctgaca ctcacacaca cactcgcaca caggcagatg tattttaaag aggaagcaga 4741 ggaaaaaaaa cgagaaaagt ttttgcttcc tggtaaaaca aaacaacaaa aacaaataca 4801 aaatcataac aaatcttttc tgacggctcc ggcaaattct attaatgtgc acatttaact 4861 gtctgcgtgt aagtgtgctc gtgtgtgggt gtgcgcgtgt gtgtgtgcga gatccttgga 4921 aaaattaaat tgaattgttt tctgcaccct agaagctcca ttcttgagaa aatcaaagtc 4981 actagattac ataaaaacca aatatatcta tttttcaact ctcacttttg tacagcaagc 5041 tttcatcggg ctaaaaaaca aaaaccccat ggttgtacat atatacattc atatatatat 5101 atatattaac ggttacgtcc ataactgtca acatttcaat atatccgaaa accaaaaacc 5161 cctaccccaa aaaaaccaac tacaaacccc atcaagctct ttttggacca ctgtattgtg 5221 tgcgctcacc cgtttactcg tccatttgtt gttaatctcg ttttcctata tgcagaatga 5281 ccattctaac ttttactttt cagtttccac aattgttatt ttttgttttt cttacttttt 5341 cgttttcgtt tttgtttccc ttctttttgt tgtatcgctt atcgtttttg ttactctttt 5401 cgtttaagtt ttacgttcaa ctaatttaac ctatgccaat ttagttttta atggattctt 5461 atggtttctt ttttgaacat taagccaaca atacgatatt tttctctatc tctctttccc 5521 tttcatttaa aaataaacgc gtgtattcaa tttgacccct gaaactgaaa ctgaaacttc 5581 aaccgattaa atccataaac aaaaccataa tcaattcaaa tatatattat aaatatatat 5641 ttcgaaccca acaaaaataa atatgaaaat atatgaaaac gaaacaaaat cgcgtgctgg 5701 tttatggaac agatttcatg atgaagaaca tgcgaatctt ttgaatgcaa tgtggctgat 5761 agcgataaca tttttgagtg ttggtttcgg tgatattgtt ccgaatacgt actgtggacg 5821 tggtatcgct gtcagtacag gaataat