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LOCUS XM_070219198 3588 bp mRNA linear INV 09-DEC-2024 calcium-activated potassium channel (SK), transcript variant X8, mRNA. ACCESSION XM_070219198 VERSION XM_070219198.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3588 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3588 /gene="SK" /note="small conductance calcium-activated potassium channel; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108058158" CDS 714..3188 /gene="SK" /codon_start=1 /product="small conductance calcium-activated potassium channel protein isoform X8" /protein_id="XP_070075299.1" /db_xref="GeneID:108058158" /translation="MSIQKLNDTTNSGYVSSEETDSLLVSSSNPSKGGGRTALLRQVK SSSTNGPTTGASTSSSGSVTGSGTGTGSGSGGGSGSVSASGSNSTAGGGTGASKPTLM RQDRTSTYLTSPQQSQHVRMGSEESMRGGGGGGGGGATAHDEDVEQGLQVRSSIVPDI EVHEEDQERGSTTTTTTITTNNQQPTISIMNLSLKPGESHSHSHSSSPGSHPNLGTSS YQNLASSIPPSVPSRCRACRNCSRRASTTPTTLIDRSASRDSVKSAFQQGNLSGSMAI CISNSALPQQQQQQQYHLQQQQHYQLQQQHLQHQQHLQQQQQQQVPPVLITSSPTNGS RIIRQSSQPESSSTAICCGPHSACVGHAHSHSHTVPNVSLKQLRESSGDGIAGIAADS LRINGGMRPFKQLRKPASTLSIPGSMKTPSIANREQISSGCNEEAAEALVGIHSDYPR YEMYMEERALTGGNTSRKPSTNSAKHKPNVGYRLGKRKALFEKRKRISDYALVMGMFG IIVMVIENELSSAGVYTKASFYSTALKTLISVSTVILLGLIVAYHALEVQLFMIDNCA DDWRIAMTWQRISQIGLELFICAIHPIPGEYYFQWTTKLANKNKTIGTEMVPYDVALS LPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVF MVSLWIIASWTLRQCERFHDEEHANLLNSMWLTAITFLCVGYGDIVPNTYCGRGITLT CGMVGAGCTALLVAVVSRKLELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYK HTRLVKRVNPGRVRTHQRKFLLAIYA" misc_feature 2163..2495 /gene="SK" /note="Calcium-activated SK potassium channel; Region: SK_channel; pfam03530" /db_xref="CDD:460958" misc_feature 2757..2996 /gene="SK" /note="Ion channel; Region: Ion_trans_2; pfam07885" /db_xref="CDD:462301" misc_feature 3036..>3182 /gene="SK" /note="Calmodulin binding domain; Region: CaMBD; pfam02888" /db_xref="CDD:460739" ORIGIN 1 caaacaacac taacggaaac atcaacgtga aagcgagacg gacgccctcc gtcccgttat 61 atgctgtgtc tgtctgtctg tctgtgtgtt gagagttcta cgtcgcgcac tccaaaaaaa 121 aaaaaaacca aaaaaaaaaa tcaaaaactt taacactcgc atacacactg gcacacacaa 181 acatacacac acatacatta atatatatag ttaaaaaaaa attatataca aaaagaaaag 241 aagtgcaaga aaaataagcg cccactgcgg ccaatggaaa tgccaaagaa aatgcagcag 301 caacaaattc gacaacaaac gcaaattcta cagcaacaac aacaacaaca agcacagcca 361 cagcagcaac aactgcagtt ccccaataca taggtccacc gattttccgt ctttgtcgcg 421 cgcgttcaca cacacaaaca cagtcacaca ctgggacaca tgcatgtgca taaatggcaa 481 tatggacgaa gagcagcagc agcatttgcc ttgtattggt ataccagcac agtgacacgc 541 gcgtgccaaa tattgccgat tttatcacac gaacaacaac aacaacaaca actgcaacaa 601 cagcaacacc agcgggacca gctattaact aaaggagcca ttacaacaac aaagaccata 661 gcaacaacaa caagaacaac gaacattgct ggaaggcgtc gcaaaatatc aaaatgtcaa 721 ttcagaagct aaacgacacc accaactcgg gctacgtgag ttccgaggag acggactcgc 781 tgctggtgag cagctcgaat ccctccaagg ggggcggccg gacggctctg ctgcgccagg 841 tgaagagtag ctccacgaat ggcccgacga cgggggcatc cacctcgtcg tcgggctcgg 901 tgacgggatc gggaacagga actggttctg gttccggtgg aggatcagga tctgtatcgg 961 catcgggctc gaattcgaca gccggcggag gaactggggc ttccaagcca acattaatgc 1021 gccaggatcg cacttccaca tacctaacga gtccccagca atcgcagcat gtgcgaatgg 1081 gctccgagga gagtatgaga ggtggaggag gaggaggcgg aggaggagcc accgcccacg 1141 acgaggatgt ggagcaggga ctgcaggtcc gcagcagcat agtgcctgac attgaagtac 1201 acgaagagga ccaagaaagg ggatcgacaa cgaccacgac cacgatcacg accaataacc 1261 aacaaccgac catatcaatt atgaatttaa gcctgaagcc cggcgagagc catagccata 1321 gccacagctc cagcccgggc agtcatccca acttgggcac ctcatcatat cagaacctgg 1381 cctcgagcat accgcccagt gtgcccagtc gctgccgggc ctgtcgcaat tgcagccgac 1441 gtgcttccac cacgcccacc accctcatcg atcgctccgc ctcccgcgat agtgtgaaaa 1501 gtgccttcca gcagggcaat ctcagtggct cgatggccat ttgtatatcg aactccgcgc 1561 tgccgcaaca gcagcagcag cagcaatatc acctgcaaca gcagcaacac tatcaattgc 1621 agcagcaaca cctgcagcat cagcaacatc tgcagcagca gcagcagcaa caggtgccgc 1681 ccgttttgat cacctcatcg ccaacgaacg gatcccggat tatacggcag agctcacagc 1741 cggaatcgag cagcacggcg atctgctgcg gaccccattc cgcctgcgtc ggccacgccc 1801 actcgcactc gcacacggtg cccaatgtct cgctgaagca actgcgcgaa agttccggcg 1861 atggaatcgc gggcattgca gccgactccc tgcggatcaa tgggggcatg cggcccttca 1921 agcagctccg caaaccggcg tcgacactct caattcctgg ctcgatgaaa acaccttcca 1981 ttgcgaaccg ggaacagatc tcatctggat gcaacgaaga agcggccgag gcactagtgg 2041 gtatccactc agactaccct aggtatgaaa tgtatatgga agaacgtgct cttactggcg 2101 gcaatacgtc caggaagcca tcaacaaact cggccaaaca caaacccaat gtgggctatc 2161 gcctgggcaa gaggaaagcc ctcttcgaga agcgcaaacg gatcagcgat tacgccctgg 2221 tcatgggcat gttcgggatc atcgtgatgg taatcgaaaa cgagctgagc agtgccggtg 2281 tctacacaaa ggcatcgttc tactcgacag cgttaaaaac cttaatatct gtttcgactg 2341 tgattctttt aggacttata gtagcttacc atgctttgga agtgcagtta ttcatgatag 2401 ataactgcgc cgacgattgg aggatcgcaa tgacatggca acgaattagt caaatagggt 2461 tagaactttt tatatgcgct atacatccaa ttcctggcga atactatttc cagtggacga 2521 cgaaattggc caataagaat aaaacaattg gcaccgaaat ggtgccatat gacgtagctt 2581 tatcattacc tatgttcctt cgattatatt taatctgccg cgtaatgctg ctgcattcaa 2641 agctattcac agacgcatca tcacggagca ttggcgctct caataggatt aattttaaca 2701 caagattcgt tttaaaaact ctaatgacaa tatgcccggg aacggttcta ttggtcttca 2761 tggtctcgct gtggatcatc gcatcctgga cgctgcgtca gtgcgaaagg ttccacgatg 2821 aggagcacgc gaatttgcta aactccatgt ggctaacggc catcacattt ctgtgtgtcg 2881 gctacggcga cattgtgcca aacacgtact gtggacgcgg tatcaccctc acctgcggca 2941 tggtgggcgc cggctgtacg gctctactag tggccgtagt ttcccggaaa ctggagctga 3001 cccgtgccga gaagcatgtg cacaacttca tgatggacac gcagttgacc aaacggctga 3061 aaaatgctgc ggcgaatgtt ctgcgtgaaa cttggctcat ttacaaacat acaagactag 3121 taaaacgggt taatcccggc cgtgtaagaa cccaccaaag aaagttcctt ctagctatat 3181 atgcgtgagt atttttagag atctatcaac aaccaatcaa ccaaccaaac aactaaccaa 3241 accaaaccaa ccaacaacta agaaaaaaaa tacgtatgaa aaaaaaagat aataactaaa 3301 attcaaaaag agtgcccaat gaaaatgata tcagatcgaa atagtagttt atcgggtctt 3361 tggggaaatc atcgaccgtt gatgttcgtt gtttatgttc tgtctctcta tctattttcg 3421 tgaaactaac tctcatttgt ctgtacccta tatgtttgtc ggattagtta aaagacaaaa 3481 gaaaaagaaa tatgtacatc agttccctgg ttcgtaatac taactctgtc ctgttttccc 3541 gtcccgaaga cccatttcat aattagaatc gaatcaaaat caaaatca