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LOCUS XM_070219197 3678 bp mRNA linear INV 09-DEC-2024 calcium-activated potassium channel (SK), transcript variant X5, mRNA. ACCESSION XM_070219197 VERSION XM_070219197.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3678 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3678 /gene="SK" /note="small conductance calcium-activated potassium channel; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108058158" CDS 714..3662 /gene="SK" /codon_start=1 /product="small conductance calcium-activated potassium channel protein isoform X5" /protein_id="XP_070075298.1" /db_xref="GeneID:108058158" /translation="MSIQKLNDTTNSGYVSSEETDSLLVSSSNPSKGGGRTALLRQVK SSSTNGPTTGASTSSSGSVTGSGTGTGSGSGGGSGSVSASGSNSTAGGGTGASKPTLM RQDRTSTYLTSPQQSQHVRMGSEESMRGGGGGGGGGATAHDEDVEQGLQVRSSIVPDI EVHEEDQERGSTTTTTTITTNNQQPTISIMNLSLKPGESHSHSHSSSPGSHPNLGTSS YQNLASSIPPSVPSRCRACRNCSRRASTTPTTLIDRSASRDSVKSAFQQGNLSGSMAI CISNSALPQQQQQQQYHLQQQQHYQLQQQHLQHQQHLQQQQQQQVPPVLITSSPTNGS RIIRQSSQPESSSTAICCGPHSACVGHAHSHSHTVPNVSLKQLRESSGDGIAGIAADS LRINGGMRPFKQGVLLMPRTLSDSRKLRLRRAFTEATNETLQCSKMLRKPASTLSIPG SMKTPSIANREQISSGCNEEAAEALVGIHSDYPRYEMYMEERALTGGNTSRKPSTNSA KHKPNVGYRLGKRKALFEKRKRISDYALVMGMFGIIVMVIENELSSAGVYTKASFYST ALKTLISVSTVILLGLIVAYHALEVQVRLFMIDNCADDWRIAMTWQRISQIGLELFIC AIHPIPGEYYFQWTTKLANKNKTIGTEMVPYDVALSLPMFLRLYLICRVMLLHSKLFT DASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVSLWIIASWTLRQCERFHDEE HANLLNAMWLIAITFLSVGFGDIVPNTYCGRGIAVSTGIMGAGCTALLVAVVSRKLEL TRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTRLVKRVNPGRVRTHQRKFLL AIYALRKVKMDQRKLMDNANTITDMAKTQNTVYEIISDMSSRQDAIEERLTNLEDKMQ SIQEHMESLPDLLSRCLTQHQERIEQRRNFLHPDTAAVAPIQAPTPQSMFNAAPMLFP HSRKKNLIYF" misc_feature 2265..2603 /gene="SK" /note="Calcium-activated SK potassium channel; Region: SK_channel; pfam03530" /db_xref="CDD:460958" misc_feature 2865..3104 /gene="SK" /note="Ion channel; Region: Ion_trans_2; pfam07885" /db_xref="CDD:462301" misc_feature 3144..3368 /gene="SK" /note="Calmodulin binding domain; Region: CaMBD; pfam02888" /db_xref="CDD:460739" ORIGIN 1 caaacaacac taacggaaac atcaacgtga aagcgagacg gacgccctcc gtcccgttat 61 atgctgtgtc tgtctgtctg tctgtgtgtt gagagttcta cgtcgcgcac tccaaaaaaa 121 aaaaaaacca aaaaaaaaaa tcaaaaactt taacactcgc atacacactg gcacacacaa 181 acatacacac acatacatta atatatatag ttaaaaaaaa attatataca aaaagaaaag 241 aagtgcaaga aaaataagcg cccactgcgg ccaatggaaa tgccaaagaa aatgcagcag 301 caacaaattc gacaacaaac gcaaattcta cagcaacaac aacaacaaca agcacagcca 361 cagcagcaac aactgcagtt ccccaataca taggtccacc gattttccgt ctttgtcgcg 421 cgcgttcaca cacacaaaca cagtcacaca ctgggacaca tgcatgtgca taaatggcaa 481 tatggacgaa gagcagcagc agcatttgcc ttgtattggt ataccagcac agtgacacgc 541 gcgtgccaaa tattgccgat tttatcacac gaacaacaac aacaacaaca actgcaacaa 601 cagcaacacc agcgggacca gctattaact aaaggagcca ttacaacaac aaagaccata 661 gcaacaacaa caagaacaac gaacattgct ggaaggcgtc gcaaaatatc aaaatgtcaa 721 ttcagaagct aaacgacacc accaactcgg gctacgtgag ttccgaggag acggactcgc 781 tgctggtgag cagctcgaat ccctccaagg ggggcggccg gacggctctg ctgcgccagg 841 tgaagagtag ctccacgaat ggcccgacga cgggggcatc cacctcgtcg tcgggctcgg 901 tgacgggatc gggaacagga actggttctg gttccggtgg aggatcagga tctgtatcgg 961 catcgggctc gaattcgaca gccggcggag gaactggggc ttccaagcca acattaatgc 1021 gccaggatcg cacttccaca tacctaacga gtccccagca atcgcagcat gtgcgaatgg 1081 gctccgagga gagtatgaga ggtggaggag gaggaggcgg aggaggagcc accgcccacg 1141 acgaggatgt ggagcaggga ctgcaggtcc gcagcagcat agtgcctgac attgaagtac 1201 acgaagagga ccaagaaagg ggatcgacaa cgaccacgac cacgatcacg accaataacc 1261 aacaaccgac catatcaatt atgaatttaa gcctgaagcc cggcgagagc catagccata 1321 gccacagctc cagcccgggc agtcatccca acttgggcac ctcatcatat cagaacctgg 1381 cctcgagcat accgcccagt gtgcccagtc gctgccgggc ctgtcgcaat tgcagccgac 1441 gtgcttccac cacgcccacc accctcatcg atcgctccgc ctcccgcgat agtgtgaaaa 1501 gtgccttcca gcagggcaat ctcagtggct cgatggccat ttgtatatcg aactccgcgc 1561 tgccgcaaca gcagcagcag cagcaatatc acctgcaaca gcagcaacac tatcaattgc 1621 agcagcaaca cctgcagcat cagcaacatc tgcagcagca gcagcagcaa caggtgccgc 1681 ccgttttgat cacctcatcg ccaacgaacg gatcccggat tatacggcag agctcacagc 1741 cggaatcgag cagcacggcg atctgctgcg gaccccattc cgcctgcgtc ggccacgccc 1801 actcgcactc gcacacggtg cccaatgtct cgctgaagca actgcgcgaa agttccggcg 1861 atggaatcgc gggcattgca gccgactccc tgcggatcaa tgggggcatg cggcccttca 1921 agcagggcgt tcttctaatg cctcgcacat tgtctgatag ccgaaagttg cgccttcgca 1981 gagccttcac cgaggccact aacgaaacgc tccaatgctc caaaatgctc cgcaaaccgg 2041 cgtcgacact ctcaattcct ggctcgatga aaacaccttc cattgcgaac cgggaacaga 2101 tctcatctgg atgcaacgaa gaagcggccg aggcactagt gggtatccac tcagactacc 2161 ctaggtatga aatgtatatg gaagaacgtg ctcttactgg cggcaatacg tccaggaagc 2221 catcaacaaa ctcggccaaa cacaaaccca atgtgggcta tcgcctgggc aagaggaaag 2281 ccctcttcga gaagcgcaaa cggatcagcg attacgccct ggtcatgggc atgttcggga 2341 tcatcgtgat ggtaatcgaa aacgagctga gcagtgccgg tgtctacaca aaggcatcgt 2401 tctactcgac agcgttaaaa accttaatat ctgtttcgac tgtgattctt ttaggactta 2461 tagtagctta ccatgctttg gaagtgcagg tgagattatt catgatagat aactgcgccg 2521 acgattggag gatcgcaatg acatggcaac gaattagtca aatagggtta gaacttttta 2581 tatgcgctat acatccaatt cctggcgaat actatttcca gtggacgacg aaattggcca 2641 ataagaataa aacaattggc accgaaatgg tgccatatga cgtagcttta tcattaccta 2701 tgttccttcg attatattta atctgccgcg taatgctgct gcattcaaag ctattcacag 2761 acgcatcatc acggagcatt ggcgctctca ataggattaa ttttaacaca agattcgttt 2821 taaaaactct aatgacaata tgcccgggaa cggttctatt ggtcttcatg gtctcgctgt 2881 ggatcatcgc atcctggacg ctgcgtcagt gcgaaagatt tcatgatgaa gaacatgcga 2941 atcttttgaa tgcaatgtgg ctgatagcga taacattttt gagtgttggt ttcggtgata 3001 ttgttccgaa tacgtactgt ggacgtggta tcgctgtcag tacaggaata atgggcgccg 3061 gctgtacggc tctactagtg gccgtagttt cccggaaact ggagctgacc cgtgccgaga 3121 agcatgtgca caacttcatg atggacacgc agttgaccaa acggctgaaa aatgctgcgg 3181 cgaatgttct gcgtgaaact tggctcattt acaaacatac aagactagta aaacgggtta 3241 atcccggccg tgtaagaacc caccaaagaa agttccttct agctatatat gcgttgcgaa 3301 aagttaaaat ggatcagcgc aaactaatgg ataatgcaaa cacaataact gacatggcca 3361 agacacaaaa cacggtctac gagataatat cggacatgtc tagccgtcag gatgccatcg 3421 aggagcgcct aaccaacctg gaggacaaaa tgcagagcat acaagagcac atggaaagcc 3481 ttccagacct attgtctcga tgtctgaccc agcaccagga gcggatcgag cagcggcgga 3541 actttttaca tcctgacaca gctgcagtgg cccccattca ggcgccaacg ccccaatcga 3601 tgttcaatgc ggcgcccatg ctgttccccc attctagaaa gaaaaatttg atttattttt 3661 gaaagcgtac ttgataac