Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Drosophila takahashii ellipsoid body open (ebo), mRNA.


LOCUS       XM_070219196            4127 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_070219196
VERSION     XM_070219196.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4127
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..4127
                     /gene="ebo"
                     /note="ellipsoid body open; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:108056244"
     CDS             226..3366
                     /gene="ebo"
                     /codon_start=1
                     /product="exportin-6"
                     /protein_id="XP_070075297.1"
                     /db_xref="GeneID:108056244"
                     /translation="MHAASMTTVEGLLQEFYQPSTSNARKREIETNLLAFKSQPEAWQ
                     LCLRVATASDITENQFLWFFSTSTLEHTITRRWTQLSPTDKTQLRESLWNSYAQLGAT
                     PNAAKRHRDTLAQLIALLGKREFPEQDPNYMQHCLELTKSRFQLGINLLRITSEEVVS
                     NRGDLTTEWKQYFYSCISMCIPDVLDLVTKYLLIAVCHINGKDIQTTIPNTLMDFSLT
                     SALPNDNQLSSSILELLGCVQHLVSWIRTELISEYFLMSILDLSQWRPAHEPISLAAL
                     SVLNELLYLQKPLPFAGTLMGGVSSLLEQHNNNRRQSEMYSDKFRELLRLYTTKYAGK
                     LMQEPELLETFLNLLYGCTTELHGALDFTEKLEIWTPIIKGIAQQPAKITRFNHVLTQ
                     LVDEIMRRTQFEANKPELEVLDNELMEDDTSATEWQQFLDQCFESLALLANTRGAHIV
                     FAQVYNHWSRPQMYLLSLEHALDHGSARSYEAARKLKGANVGEILRDFATVCQAVVRL
                     APLMDTSSAAPGVADEMECQLQMLSDSLLQTLQLLASNRLGSGGSEMDKATFQTDLDN
                     LYAQVLLAIRSIFPLTKAMSGEELLHRLFAILGSIFACNGSLSAASPIVQQAASELLL
                     FISTVIRPKCLLDIPQIQSLLQAGSRLGAQLPRQVCINVHISLVSYMVLPWKCVPEQQ
                     QDYPRRLWMLREYVQGLAQNFLDLDLGQANESKVAATTLSLLGTFTALIEYFKATGGN
                     AKDMLASTFKPILTKALMIFNSFGLSSIAMAITVAEFSLSMLRTLPTHLGAQFIKEMI
                     TLFISVSSREQLTLSRLAVMEKILQMFKLIVEQPGSASLGLLPSILDFSTQQILPLLQ
                     QQNAATDNSEITSLLYALFDSVLTCKWQFFYKNQLSNGHSGSGGNFNCSDNLHPAHFM
                     AILNAYGQMLVSGTDPSNVRSVLFSMQNVNERSRLYQRALFKEQLLASFQRALLNLLL
                     SGEGSLHFDMIAQALYAMGQVDRRQLLESFAHASLPVAQTALEEICQTSDIPTFTQKL
                     TQLMQDAHCVHLNETA"
     misc_feature    259..>1272
                     /gene="ebo"
                     /note="Importin beta-related nuclear transport receptor
                     [Nuclear structure / Intracellular trafficking and
                     secretion]; Region: CRM1; COG5101"
                     /db_xref="CDD:227432"
     misc_feature    310..519
                     /gene="ebo"
                     /note="Importin-beta N-terminal domain; Region: IBN_N;
                     smart00913"
                     /db_xref="CDD:197981"
     polyA_site      4127
                     /gene="ebo"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttttaggacc ttttcgaaca aaaaaagtgg gcaaaagaga ggaaaaacac aaagaaaagc
       61 atgaaattgg tggacgcccg atgcgacttc tgatgcgatc ctgatcctgg ccagaaccgc
      121 gttcgagcgg agcacgcaca cacagtgacc cagagtcccc atcactcatc catcagcaca
      181 gagatccagt ttcaggcgga gatcaggcgg gcaggaacgg ggaaaatgca cgctgcatcc
      241 atgacgacgg tggagggtct gctgcaggag ttctaccagc cgagcacctc gaatgccagg
      301 aagcgggaga tcgagacgaa tctcctggcc ttcaaatcgc agccggaggc gtggcagctg
      361 tgcctccgtg tggccaccgc ctcggatatc acggagaatc agttcctctg gttcttcagc
      421 acctccacgc tggagcacac gataaccagg cgatggacgc agttgagccc cacggacaag
      481 acgcagttgc gcgaatcgct ctggaattcg tatgcccaac tgggcgccac tccaaatgcg
      541 gctaaaagac atcgggatac tttggcccag ctgattgcgc tgctcgggaa gcgcgagttc
      601 cccgaacagg atcccaacta catgcagcac tgcctcgagc tgaccaagag tcgcttccag
      661 ctgggcatca acctgctgcg gatcacctcc gaggaggtgg tgagcaaccg gggcgatctg
      721 accaccgaat ggaagcagta cttctactcc tgcatctcca tgtgtattcc cgatgtcctg
      781 gacctggtca ccaagtatct actaatcgct gtgtgccaca tcaatggcaa agacatccaa
      841 acgaccatac caaacaccct catggacttt agtctaacct cagcgctgcc aaatgacaat
      901 caactaagtt cctctatttt ggagctgctc ggctgtgtgc agcacttggt ctcctggata
      961 cgcactgaac tgatctcgga gtacttcctc atgagcatac tggacctctc ccagtggcga
     1021 cccgcccacg agcccatctc cctggccgcg ctctctgttt taaatgagct cctctacctt
     1081 cagaagccat tgcccttcgc tgggacttta atgggcggcg ttagtagcct tttggagcag
     1141 cacaataaca atcggcggca gagcgagatg tatagcgaca agttccggga gctcctgcgc
     1201 ctctacacca ccaaatatgc cggcaagctg atgcaggagc cggagctgct cgagaccttc
     1261 ctcaatctgc tctacggctg caccacagaa ttacatggcg ccttggactt caccgaaaag
     1321 cttgagatat ggacgcccat catcaagggc attgcccaac agcccgccaa aattacgcgc
     1381 ttcaaccatg tgctcaccca gctggtggat gagatcatgc ggcgcactca attcgaggcc
     1441 aataaacccg aactggaggt gctggacaac gagctcatgg aggacgatac ctccgccacc
     1501 gagtggcagc agttcctgga ccagtgcttc gagtccctgg ccctgctggc caacacccgc
     1561 ggcgcccaca tcgtcttcgc acaggtctac aaccactggt cgcggccgca gatgtatttg
     1621 ctgtcgctgg agcacgccct ggatcacggg agtgcgcgca gctacgaggc ggcgcgcaag
     1681 ctgaagggcg ccaatgtggg cgagattttg cgagacttcg ccaccgtctg ccaggcggtg
     1741 gtgcgtctgg ctccgctgat ggacacctcg tcggcggcgc ccggcgtggc ggacgagatg
     1801 gagtgccagc tgcaaatgct gtccgacagt ctgctgcaga cgctgcagct cctggccagc
     1861 aatcgtttgg gtagcggcgg cagtgaaatg gacaaggcca cgtttcagac tgatttggat
     1921 aacctatacg ctcaagttct gctggccatc aggagcatct ttccgctaac gaaagccatg
     1981 agcggcgagg agctgctgca cagactcttt gccattttgg gcagcatctt tgcctgcaat
     2041 ggctctttat cggcagcctc gccaattgta cagcaagcgg ccagcgagct gctgctcttc
     2101 atctcgactg tgatacggcc caagtgcctc ttggatatac cgcaaatcca gagcctcctg
     2161 caggcgggct cacgcctggg cgcccagctg ccgcgccagg tgtgcatcaa tgtgcacatc
     2221 agtctggtca gctacatggt gctgccgtgg aagtgcgtgc ccgagcagca gcaggactat
     2281 ccgcgccgtc tctggatgct gcgcgaatat gtccaggggc tggcgcagaa ctttctcgat
     2341 ctggatttgg gccaggccaa cgagagcaag gtggcggcca cgacgctcag tctgttgggc
     2401 actttcacgg ccctcatcga gtatttcaag gccaccggag gcaatgccaa ggatatgctg
     2461 gcgagcacat ttaagcccat tttgaccaag gccctgatga tcttcaacag cttcgggctg
     2521 agcagcattg ccatggccat aacggtggcc gaatttagtc tcagtatgct gcgcacattg
     2581 cccacccatt tgggcgccca gttcatcaag gagatgatca ctttgttcat cagtgtcagc
     2641 agcagggaac aactaacgct gagtcgactg gctgtgatgg aaaagatact gcagatgttc
     2701 aagctgattg tcgagcagcc gggcagcgcc tctttgggcc tgctgccctc cattttggac
     2761 tttagcactc agcagatttt gccgctgttg cagcagcaaa atgcagccac cgataacagc
     2821 gagattacca gtctgctgta cgctttgttt gatagtgtgc tcacctgcaa gtggcagttc
     2881 ttctacaaga atcagctctc caatgggcat agtggctccg gtggcaactt caactgcagc
     2941 gacaatttgc atccggccca tttcatggcc atcctaaatg cctacggtca gatgttggtc
     3001 agcggcacgg atcccagcaa tgtgcgcagc gttctcttct ccatgcagaa tgtaaacgaa
     3061 cggagtcggc tgtatcagcg tgctttgttc aaggagcagc tgctggcctc ctttcagcga
     3121 gcgctgctga atttgctgct gagcggagag ggctcgctgc acttcgatat gattgcccag
     3181 gccctgtatg cgatgggcca ggtggaccga cgccagttgc tcgagagctt tgcccacgcc
     3241 tcgttgccgg tggcgcagac ggcgctggag gagatctgcc agacaagtga cattccaacg
     3301 tttacgcaga aactcacgca gctcatgcag gacgcccact gtgtgcatct caatgagacg
     3361 gcgtaggccc tactacccag tacttccact gccccccatt catcctcctc ctctttttag
     3421 tttgttcatt tagagtgctt gcttgtaaat agaatactta atcgttttat gttttgttta
     3481 actttttaat ttactttgcc gtcgcttcgt cttgtatgcc atatgttttc cgtcactgtt
     3541 tgtgtcatct tgctcagttt ttgattcccc tgtgtaaccc acccactgta tccccaccag
     3601 attgcgtttg gttccttctt tgcgcgaggt tgtgtttcca attaggagat cgaacagcat
     3661 tcatcccgat tgataaaaga cattaattgt taatattaaa aaaaaaacga aaaacaaaaa
     3721 ttctttagct taaatgcata cttatcttta attttatgta taccacgtaa catacatacg
     3781 attactctgc tttctgtgct gtcaccgcaa atcgataaaa gtcataccta tattcttagt
     3841 agcatatata catattatat acataaatta attagcatat atcaatatgt aaatcagtta
     3901 cgtcataagc aagtaaaaag tatcaagtaa aacaaaaaaa aaatcaaaaa aaaaccggga
     3961 aggagacgaa aacccagcca cacattcatg taatttattc tgcgaaaacg aaacaacaca
     4021 ctacacacaa atccgagtcg ttttaacact tcgttttaat gatttgattt ctaatcgctt
     4081 aagtcccttc aatcaaaaat tcaataaaac tatttttacc attttaa