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LOCUS XM_070219194 8241 bp mRNA linear INV 09-DEC-2024 subunit T (Ca-alpha1T), transcript variant X2, mRNA. ACCESSION XM_070219194 VERSION XM_070219194.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8241 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8241 /gene="Ca-alpha1T" /note="Ca[2+]-channel protein alpha[[1]] subunit T; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108070319" CDS 106..5457 /gene="Ca-alpha1T" /codon_start=1 /product="uncharacterized protein Ca-alpha1T isoform X2" /protein_id="XP_070075295.1" /db_xref="GeneID:108070319" /translation="MEKTSHWAALYFVALMTFGNYVLFNLLVAILVEGFSSERNERRE REQRELVKKLREETLAENYSDGMYDESRSEADSSTTNDSYYEVRNRWRSAEDVRKLQD SAELIIEAKSNMHRQRLLQPTHDYQINELPPASASSAAPSASGTSGEAPSPRDREPGG GGGSKEEGQQQQLQQQLQQQHAKPRGGLKKTYSIKERRGGERESRESRLSKIRLVRDP PIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLRPPNIFTGGQRSLDEGI PSIDLIPPSPVLSHKPLNILNASQLGVGVGVGVTSTAGSSASMHSVIIDDISKSSSST AAATPIYVPTISSSAEAQSQSHSLNDVSVGTADMMVPGIVGRSTGNTGASTSGSSSSE RLPLAPPPQHQGSFKHRLRRGSSKRRRSSALALGNEDNAARRTQQQEEEDEQQQQQLN NGGGGDNSFLLRSGNAASGSGPPAGAKETNRLSPQNSIRRLSNTLSIGSGPPVGSRRA SACIFNSQVYQNLNQPPKLRPGSGQRRMSSIELAFSKTSHLNLHNLEANRKSLSYTNS KMDLDKWNKSYGNLNEPDNMLQQYMEARDKRKNSISHYNLKKRLEEKELQQLQQLHQQ QLLQQRQDSFSSTNQQQLQQHRLSKDQQQLAMQPHSMVPGGGERYSKLKMLIEQLTPK HFTTEREDYSLYIFPEDNRFRQICTWFVNQKWFDNVVLLFIALNCITLAMERPNIPPS STERLFLATANYVFTVVFTVEMFIKVVATGMFYGHDAYFTSGWNIMDGSLVTISIIDL LMSLISESSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVLIC CTFFIIFGILGVQLFKGTFYYCEGENIKGVRNADECRRIPGNVWTNRKYNFDDLGKAL MSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLNMFVG VVVENFHRCREEQEKEEKIRRAAKRALQMEKKRRRMHEPPYYTNYSPTRMFVHNVVTS KYFDLAIAAVIGLNVVTMAMEYYMMPSGLKYALKIFNYFFTAVFILEANMKLVALGWK LYLKDRWNQLDVGIVLLSIVGIVLEELETKIIPINPTIIRVMRVLRIARVLKLLKMAK GIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHF ANFGMAFLTLFRVATGDNWNGIMKDTLRDNCDDAADCVRNCCVSSVIAPIFFVIFVLM AQFVLVNVVVAVLMKHLEESHKQMEDELDMEVELERELVREQEFAQEQKLCQQLAEAQ SKAAAPPRPLAKVKSLPKNFIYSTPSLDKKFPLPVATGTANPSSSMTSSVAMGVATTP SGGAGSGAASTGASGQRRQTVQYFQQPPQSMLGLSLAEMGGTLTPQALGARLGEPFGG TATATAGGGGGGVTGEPPAVGVAGLPLPPLDNRRRGRRASAAAGFRKRGVLSKERSLD EQALRKKNLEAKLTSCESLPWGGQSYWAIRRRNLEAKRTSCDSLPWGGDALDCRRGTI FESLESDGGGVGGGVGGGGSYDIRSVRSADVGHLEESEMGDVSTALSVVSALVPNPPP PLSLPIATPTPTPMAMAHPPPRRPFGWSQSVDQGCSLRSSLLLSVPRSMPPRSRSGST KQLFKQQALDEDADMDESSLLLPTASGSIMPVIASSSSLDIPGEPGKVLPDIAAAQGV TKSDSSDILRIISERRRMDQREQREPEQDQDQDNEAEDRDSDYKELLLVKSPQSSMD" misc_feature <109..216 /gene="Ca-alpha1T" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2242..3063 /gene="Ca-alpha1T" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3193..3894 /gene="Ca-alpha1T" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" ORIGIN 1 gcgcacaatg gacaatgtgg ccgtattttt ctccctgctc gtcttgttca tcttcatctt 61 cagatactca cccaagagga ttggaacgtc gtgctgttca acggaatgga aaagacaagt 121 cattgggccg cattgtactt tgtggcacta atgacgttcg gcaattatgt gctatttaat 181 ttattggtgg ccattttggt tgagggattc agttcagagc gaaatgaacg tcgcgagcgc 241 gaacagcgcg agttggttaa gaaactgcgc gaggagactt tggccgagaa ctacagcgat 301 ggtatgtacg atgagtcgcg gagcgaggcg gactcctcga cgaccaacga tagttactac 361 gaggtgcgca accgctggcg atcggcggag gatgtgcgca agctgcagga ctccgcggag 421 ctgatcatcg aggccaagag caacatgcac cggcagcgcc tgctgcagcc gacccacgac 481 taccagatca acgagctgcc ccctgcctcc gcctcctctg ccgctccctc ggcctctggc 541 acctccggcg aggcaccttc tcctcgagat cgagagccgg gcggcggcgg cggcagcaag 601 gaggaggggc agcagcagca gctgcagcag cagctgcagc agcagcatgc caagccgcgc 661 ggcggcctca aaaagacata ctcgatcaag gagcggcgcg gcggtgagcg ggaatcgcgg 721 gagtcgcgcc tctcgaagat ccggctcgtc cgggatccgc ccatcatcac gaccacggcg 781 gccacgccgc aggactcgcc tagcaccact ctggagccgg gcatgagttt ccgccagtgg 841 ggcgacatgg agccacccag tccgccgtcg ccgtcacttt tgcggccgcc gaacatattt 901 accggcggtc agcggagtct ggacgagggc ataccctcca tcgatctcat cccgccctcg 961 ccggtgctct cccacaagcc cctgaacatc ctgaatgcca gccagctggg cgtgggcgtg 1021 ggtgtgggcg tgaccagcac cgctggcagt tcggccagca tgcacagcgt gatcatcgac 1081 gacatctcga agagctccag ctcgacggcg gcggctacgc ccatttatgt gcccaccatc 1141 tcgtcctcgg cggaggcgca gagccagagt catagtctca atgatgtgag cgtgggcact 1201 gccgatatga tggtcccggg aattgtgggc aggagtactg gaaacacggg ggcctcgacc 1261 agtggcagtt cgtccagtga gaggctgccg ttggccccgc cgccacagca tcaggggagt 1321 ttcaagcacc gattgaggcg cggcagctcc aagaggcggc gatcctccgc tttggctctg 1381 ggcaacgagg ataatgcggc tcgaaggacc cagcagcagg aggaagagga cgagcagcag 1441 cagcagcagc tgaacaatgg cggcggcggc gacaacagct ttttgctgcg aagtggcaac 1501 gctgccagtg gcagtggtcc acccgcgggc gccaaagaaa cgaatcgcct gagcccgcag 1561 aactcgatta ggcggctttc gaacacactg agcataggca gtggaccccc cgtgggcagt 1621 cgtcgtgcct cggcctgcat tttcaactcg caggtgtacc agaatctaaa ccaaccgccg 1681 aaactgagac caggatcggg acagcgccga atgagctcca tcgagctggc cttcagcaag 1741 acctcgcatc tgaatctgca caacctggag gcgaaccgca agtcgctatc gtacacgaac 1801 tcaaagatgg acctggacaa gtggaacaag tcgtacggca atctgaacga gccggataac 1861 atgctgcagc agtacatgga ggcgcgggac aagcgcaaga actccatcag ccactacaac 1921 ctgaagaagc ggctcgagga gaaggagctg cagcagctgc agcagcttca tcagcagcag 1981 ctgcttcagc aacggcagga ctccttctcc tcgaccaacc agcagcagct gcagcagcac 2041 cgcctgtcca aggaccagca gcagctggcg atgcagccac attccatggt gccaggtggt 2101 ggcgagcgct actcgaagct caagatgctc atcgagcagc tgacgcccaa gcactttacc 2161 accgagcgcg aggactactc gctctacata ttcccagagg acaacaggtt ccggcaaatc 2221 tgtacgtggt ttgtcaacca aaagtggttc gacaacgtcg tcctgctgtt catcgcgctc 2281 aactgcatca ccctggccat ggaaagacca aacatccctc caagcagcac cgaaagattg 2341 ttcctggcaa cagccaatta cgtgttcacc gtcgtcttta ccgtcgaaat gtttatcaag 2401 gtggtggcca cgggaatgtt ttacggccac gacgcctact ttacgtccgg ctggaatatc 2461 atggacggat ctttggttac catttccata attgatttgt taatgtccct gattagcgaa 2521 tcgagtccga ggatatttgg gattttaagg gtgtttcgac tactccgatc cttgcggccg 2581 ctgcgggtga tcaaccgagc cccgggtctg aaactagtcg tgcaaacgct cttatcgtcc 2641 ctgcgtccca tcggcaacat cgtgctgatc tgctgcacct tcttcatcat ctttgggatc 2701 ctgggcgtcc agctgttcaa gggcaccttc tactactgcg agggcgagaa catcaagggc 2761 gttcgcaatg cggacgaatg tcgccgcata ccgggcaatg tttggacaaa tcgaaagtac 2821 aatttcgatg atctcggcaa ggcgctgatg tccctgttcg tcctgagttc ccgcgacggt 2881 tgggtgaaca tcatgtatac cggactcgat gccgtgggcg tcgatcaaca accgatagtc 2941 aactacaacg agtggaggct actgtacttc atcgccttca ttctgctggt gggcttcttt 3001 gtgctcaaca tgttcgttgg cgtggtggtg gagaatttcc atcggtgtcg cgaggagcag 3061 gagaaggagg agaagattcg gcgggcggcg aagcgggctc ttcagatgga aaagaagcgg 3121 aggagaatgc acgaaccacc ctactacacc aactactcgc cgacgcgaat gttcgtgcac 3181 aatgtggtga cctcgaagta ctttgacctc gccattgcgg ctgtgattgg cctgaatgtg 3241 gtcaccatgg ccatggagta ctacatgatg cccagtgggc tgaagtacgc cctcaagatc 3301 ttcaactact tcttcaccgc agtctttata ctggaggcca acatgaaact ggtggcgttg 3361 ggctggaaac tctacctcaa ggatcgctgg aatcagctgg acgtgggcat agtcctgctc 3421 tcgatagtgg gcattgtcct ggaggagctg gaaacgaaga taatacccat taatcccacg 3481 atcatccggg tgatgagggt actcaggata gcgagagtgc tgaagctcct caaaatggcc 3541 aagggcatta gggcgctgct ggacaccgtg atgcaggccc tgccccaggt gggcaatctc 3601 ggactgctct tcttcctgct cttcttcata tttgcggcgc tgggcgtgga gctgttcggg 3661 cgactcgagt gctccgatga gataccctgc cagggattgg gcgagcacgc gcacttcgcc 3721 aactttggca tggctttcct cacattgttt cgcgtagcga ctggcgacaa ttggaacggc 3781 atcatgaagg acacgctgag ggataattgc gatgacgcag ccgattgcgt gcgcaattgc 3841 tgcgtcagct cggttattgc tcccatattc tttgtgatat tcgtgctgat ggcgcaattc 3901 gttttggtca atgtcgtcgt ggctgtactg atgaaacacc tcgaggagag ccacaagcaa 3961 atggaggatg agctcgacat ggaggtggag ctggagcgcg aactggtccg cgagcaggag 4021 ttcgcccagg agcaaaagtt gtgccagcag ctggcggagg cgcaatcgaa ggcggccgct 4081 cccccgcgcc ccctggccaa ggtcaaatcg ctgccgaaga actttatcta cagtacgccc 4141 tcgctggaca agaagttccc actgccagta gcgacgggca cagcgaatcc cagttccagc 4201 atgaccagct cggtggccat gggggtggcg actaccccta gtgggggtgc gggttctgga 4261 gccgcctcaa ctggagcatc cggtcaacgc agacagaccg tccagtactt ccagcagcca 4321 ccacaatcca tgctcggctt gagtctcgcc gaaatgggcg gcacgctgac gcctcaggcg 4381 ctcggcgccc ggctgggcga gcccttcggc ggcacagcga cggcaacggc gggaggtgga 4441 ggtggaggtg taacgggcga accgccggct gtgggcgtgg ccggcctccc gctgccgccg 4501 ctggacaatc gccgtcgcgg gcgtcgcgcc tccgcggccg ccggcttccg caagcgcggc 4561 gtgctgtcca aggagcgatc cctggacgag caggcactcc gtaagaagaa cctggaggcc 4621 aagctcacca gctgcgagtc gctgccctgg ggcggtcaat cctactgggc aatccgtcgt 4681 cgaaatctgg aggccaagcg caccagctgc gactcgctgc cctggggcgg agatgccctc 4741 gactgccgga ggggcacgat cttcgagagc ctcgagtcgg atgggggcgg agtgggtggc 4801 ggagtgggtg gtggtggttc ctacgatata cggagtgtgc gcagtgccga cgtgggccac 4861 ctggaggagt cggagatggg agatgtgtcc accgccctgt cggtggtcag tgccctggtg 4921 cccaacccgc cgccgcccct gtccctgccc atagcaacgc ccacgcccac gcccatggcc 4981 atggcgcatc cgccaccgcg gagacccttc ggctggtcac agtcggtgga ccagggatgc 5041 agcctgcgga gcagcctgct cctctccgtt cccagatcca tgccgccgcg cagtcgcagt 5101 ggcagcacca agcagctctt caagcagcag gctttggacg aggatgccga catggacgag 5161 agttcactgc ttttgcccac ggcttcagga tccatcatgc ccgtcatagc ctcctccagt 5221 tcgctggaca tacccgggga gccggggaaa gtcctgccgg atatcgcagc agcccaggga 5281 gtcaccaagt ccgactcctc ggacatcctg aggatcatca gcgagcgcag gcgcatggat 5341 caaagggagc agagggagcc cgaacaggat caggatcagg acaacgaggc ggaggacagg 5401 gacagcgact acaaggagct gctcctggtc aagtcgccac agtcctccat ggactaaatg 5461 caaatcttaa acagtagtta tctctaacta gggccaggat agccgtacac tatatagtaa 5521 caaggatgat agctaggata acccagagtt tgtctatcct gtaaactgga aacgcggaag 5581 gagcttactt tcaacccccc caaaaatcga tctatatatt ctctataacg tacgcctggc 5641 cgccattaaa gaatacttta gggaattttc taaaaactat aactataaca ttaggcttta 5701 ggcataaaag atcgaagaat gaatgattaa tcgatagcaa actcttagcc agaaaaaacg 5761 aaactaaaaa ccagtaaaat aaaattgaaa gcaaagttag gtaaagcaaa aaataatgag 5821 gagaaaagct agtaagctaa attgtcaact gtttttagtg caatcctacg gttttcataa 5881 ctttaacaag cagaacttat aagaagaact aaaaactaaa aaaaagcagt caaaaagata 5941 gctaagtttc aagttgatta gagtgttttc cgtttaaatg tagctgtcga aagcaaatga 6001 ttacccagat gacgacgatg gattatatac aagtgttata tgcgatttac atatatacag 6061 ttatattaca tatacagtta cttataggga tactgcattc gaaacaaaaa tgatggaaat 6121 ttgtgaacaa agaatcatca actctgtgat tagctcttaa agtttaaacg tttgtgtaaa 6181 acaaagaaca aagaacacac accacaatgc tatctgtata tagaaggcct gtatgtaaac 6241 atatgtattc gagtgtattt tacgtagcta agccagggga aaaactaaga aaaactaaga 6301 aaaaagagcc atctgagcga acccattgat aagcaataga gaactgtaga acttaagatc 6361 gtacctaacc taaaaacgaa taaaactgcg ttgttccagg gtcaagatta ccgtgcccaa 6421 aaaaaaagga ttcggaaaag ggaaaaaccg aacaaataat aagaactttg tgcaaacgaa 6481 tttacttagg tacttaaaca cacacacata cccatacaga tagctattac gatctggtcg 6541 acaatctttg ctaaatctcc cttgtctgtc tctctatctc cccctaaaag gcttccaatt 6601 cttcaagaac ccgcccccct aaagaaaaga aacagacatc cgaaaaacag tgccaacgca 6661 gaaagggtat tcaggatgtt tttttttata aaaaaaaatt actttcaaac ctaaacagaa 6721 aaaaaaaaaa agaaagcaaa gagcaaggca tcaagaacta caagaagaac tttaaaaagt 6781 agcatttata aagaaaaaac caagagaatc gtagtagaaa tttaaagatt aatgtttaat 6841 gactatatat agtgtatata tggaactatc aacgaattac aatagagtat caagatattt 6901 cttcagaagg cataactatg tagaacaaga caaggagcga ggagtcgagg aatcgagaag 6961 aacactaact taacactgtc aatttttcaa catggtctaa gctaattttt caaggaaaac 7021 caaagatcta agaatgaaaa caattttaca ctctttgtac acactgtaaa aaccgaagtg 7081 aaggagctct ccagtttaga taaactttaa aatcaaactt agcaaacggt tcgggcgaaa 7141 gcgaggaaaa gaagaagcaa caaatttaat tacgatacga taatttcatc tgtgcctttc 7201 tctacgaata tatatatata cacatttata catatatgta tacatgacaa atgtatcaga 7261 tactgtctct gtctctttct aagctcccac tccctctctc tctctctcaa acacaaacac 7321 acatgccaca aactcaccac acccacacag acaccaagca agcagtgcga aatgtaacgg 7381 tgatggcaag cagtgcctcg cgtaactaaa aaagcaactc tgaaaactat tttcgaggca 7441 ggacgaagga cgaaggaata ataacgaaaa acaaagcaaa acaaaataac tacttaagcc 7501 tactaataaa tggaaaccga aaatacaaaa atacaacatg gaagtaaaaa tacaaataaa 7561 attaaaagaa agcatgaagt ttataggtta atgcgctagt agttttgaac tttttttttg 7621 taatttttta atgtagccgc tttgaagtaa accaaatgaa actacattcg tttttaactt 7681 tagttgtgtg agtcggtttt tttgtgcgaa gcgtaaagca actataaaaa gcgtttcttc 7741 ttgttgatta ataattaggt aaactgctac aaaacataag ttaataaatg aaaaacaaaa 7801 ggtaaagaaa aagtaaaagc aaaacgcaag acgcaaaaaa ccaaagccaa caactaaatt 7861 agaaaaagtg agttaaattt aaatttaatg ccataaaggc caacgaaatg caaacctaag 7921 caaattagct tttagctccg tgcaggtaca agaaaacccc tcgaaaacca ttgattcttt 7981 gcaaactaaa ataagccaat taaatgtgaa attgtttaag caaggtcata ggaaactaag 8041 cactatcctc tgctgcaaag taaggaaccg aaactctgtt agacaaatag ccaatagtca 8101 agttgtaatc atttcgttgc gtgccctttg cgtataattt gaatggttcg attggttcca 8161 ctagatacgt acatatatac tgagaacaca tactatgtaa agcagcgaaa caaaaacaag 8221 aagcattata aattaaagag a