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PREDICTED: Drosophila takahashii hayan (Hayan), transcript variant


LOCUS       XM_070219165            1540 bp    mRNA    linear   INV 09-DEC-2024
            X4, mRNA.
ACCESSION   XM_070219165
VERSION     XM_070219165.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1540
                     /gene="Hayan"
                     /note="hayan; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 6 Proteins"
                     /db_xref="GeneID:108061002"
     CDS             357..1502
                     /gene="Hayan"
                     /codon_start=1
                     /product="serine protease Hayan isoform X3"
                     /protein_id="XP_070075266.1"
                     /db_xref="GeneID:108061002"
                     /translation="MISARSCLLLGLLALTNSGRLAVGDEGDPCQVKADIPGICRPSS
                     GCNNIEGYLKSGALSTNQVPSCGFGAREEIICCPTVACCPTDSTTTTTTTPSPSPSRV
                     NVPDQERPAAAACARIRSGDRPLTPHILGGIPVALGVYPHMAAIAYNTFDTVDFRCGG
                     SLIASRFVLTAAHCVNSDSTTPAFVRLGTVAIENPTAGFQDINVIDVQIHPNYTSSSK
                     YNDIAILELAEDAKESDTIRPACLYIDRAGPPIDSKVFVAGWGVMNVTNRARSKILLR
                     AGLDLVPVDECNASFAEQPSTIRALKQGVIDSLLCAADKKQVKDACQGDSGGPLILET
                     DEVDGLYSVLGVINSGFGCATKTPGLYTRVSSFLDYIEGIVWPANRV"
     misc_feature    444..590
                     /gene="Hayan"
                     /note="Clip or disulphide knot domain; Region: CLIP;
                     smart00680"
                     /db_xref="CDD:197829"
     misc_feature    738..1469
                     /gene="Hayan"
                     /note="Trypsin-like serine protease; Region: Tryp_SPc;
                     smart00020"
                     /db_xref="CDD:214473"
     misc_feature    741..743
                     /gene="Hayan"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     misc_feature    order(873..875,1017..1019,1332..1334)
                     /gene="Hayan"
                     /note="active site"
                     /db_xref="CDD:238113"
     misc_feature    order(1314..1316,1398..1400,1404..1406)
                     /gene="Hayan"
                     /note="substrate binding sites [chemical binding]; other
                     site"
                     /db_xref="CDD:238113"
     polyA_site      1540
                     /gene="Hayan"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gttgcttggg cgatgcgttg ctgagcggtc atagccccac tatatactat atagcctatt
       61 ccgccgattc cgaatccgaa tccgattccg cgatagccac cggttttcag ctttattggc
      121 tctgctggtg tgcttttttg ctgtgtgttt ttttttgttt tgtgattttt atttactttt
      181 tttttatttt gtgttgtctt atttttcgat gtagtgttgt gttgtatttt attgttcagt
      241 gccgcccgat tgccgttttc atagtgcccg acgcactcaa taaacatcaa cgtatacgta
      301 tcatacgtat tcccttatca gagaccgaaa aaaggtcgtg tcaaagctga ctgaagatga
      361 tctcggcgag aagctgcctc cttctgggcc ttctggcact gacaaactcc ggccgactag
      421 cagttgggga tgagggcgat ccgtgccagg tgaaggcgga cattccgggc atttgccggc
      481 catcctcggg ttgtaacaat atcgagggat acctcaagtc gggggccctg tccaccaatc
      541 aagtgccgag ctgcggcttt ggggcgcgcg aggagatcat ctgctgcccc accgtcgcct
      601 gctgtcccac tgacagtacg acgacgacga cgacgacgcc cagccccagt ccttcgcgcg
      661 tcaatgtccc ggaccaggag cgaccagcgg cggcagcctg tgcgaggatc cggtccggcg
      721 acaggccctt aacgcctcac atcctgggcg gcataccggt ggctctgggc gtctatcccc
      781 acatggcggc catcgcatac aacaccttcg atacagtgga cttccgctgt ggcggatcgc
      841 tcatcgccag tcgcttcgtc ctcacagctg cccactgcgt gaatagtgat agcacaacgc
      901 cggccttcgt ccgcttgggt acggtggcca tcgagaatcc cacggcgggc ttccaggaca
      961 tcaatgtgat tgacgtccag attcacccga actatacgag cagtagtaaa tacaatgata
     1021 tcgccatttt ggaactggcg gaggatgcca aggagtcgga caccattcgt cctgcctgtc
     1081 tgtacattga tcgcgcaggt cctcccattg actccaaagt tttcgtcgcc ggttggggcg
     1141 ttatgaatgt gaccaatcgc gccaggtcaa agatcctgct gcgtgctggc ctggatctgg
     1201 tgcccgtgga cgagtgcaac gcctccttcg ccgaacagcc cagcaccatt cgggccttga
     1261 agcagggcgt catcgattcg ctgctgtgcg cggcggacaa gaagcaggtg aaggacgcct
     1321 gccagggcga ttccggtggt ccgctcatcc tcgaaacgga cgaggtggac ggcctctact
     1381 cggtcctggg cgtaatcaac tcgggtttcg gctgcgccac caaaacaccg ggcctctata
     1441 cgcgagtcag ctccttcctc gactatatcg agggtattgt gtggcccgct aaccgggtgt
     1501 gattagactt ttgatctgca ataaatttag tttgaacgga