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LOCUS XM_070219159 2650 bp mRNA linear INV 09-DEC-2024 (DIP-beta), transcript variant X6, mRNA. ACCESSION XM_070219159 VERSION XM_070219159.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2650 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2650 /gene="DIP-beta" /note="Dpr-interacting protein beta; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:108065677" CDS 530..1618 /gene="DIP-beta" /codon_start=1 /product="lachesin isoform X6" /protein_id="XP_070075260.1" /db_xref="GeneID:108065677" /translation="MEDAGKYMCQVNTDPMKMQTATLEVVIPPDIINEETSGDMMVPE GGSAKLVCRARGHPKPKITWRREDGREIIARNGSHQKTKAQSVEGEMLTLSKITRSEM GAYMCIASNGVPPTVSKRMKLQVHFHPLVQVPNQLVGAPVLTDVTLICNVEASPKAIN YWQRENGEMIIAGDRYALTEKENNMYAIEMILHIKRLQSSDFGGYKCISKNSIGDTEG TIRLYEMERPGTQKKIRDDDLNEVSKNEVVQKDTRSEDGSRNLNGRLYKDRAPDQHPA SGGDPVLLVRGPRRLIGIFLLALLVLLTAMAEAGPTTLFCRTKGGRQKNAGATSLNGR RQDMKDKKWSKFWERSARSWSSGAKAAE" misc_feature 614..904 /gene="DIP-beta" /note="Immunoglobulin domain; Region: Ig; cl11960" /db_xref="CDD:472250" misc_feature 671..685 /gene="DIP-beta" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409353" misc_feature 710..724 /gene="DIP-beta" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409353" misc_feature 797..811 /gene="DIP-beta" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409353" misc_feature 839..856 /gene="DIP-beta" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409353" misc_feature 881..892 /gene="DIP-beta" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:409353" misc_feature 962..1198 /gene="DIP-beta" /note="Immunoglobulin like; Region: IG_like; smart00410" /db_xref="CDD:214653" misc_feature 965..979 /gene="DIP-beta" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409353" misc_feature 1004..1021 /gene="DIP-beta" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409353" misc_feature 1076..1111 /gene="DIP-beta" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409353" misc_feature 1139..1156 /gene="DIP-beta" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409353" misc_feature 1178..1189 /gene="DIP-beta" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:409353" ORIGIN 1 aagaagccga atgcttattg atatactttt aaaaactgac aaaatatttc cattacaagg 61 acgagtgttt gaagaattta atgtacgctt ttgagtcaaa acgaaatcat ttaaaattac 121 ttaccatctg aaaataatat atgtgagaac atcaacagaa taaatgatat atgcaaagag 181 ccctaattat ttggtaacct aattttccaa attaatcaaa ttacaaaaca attcattgtc 241 aaaaatacaa tcagttacca aatgaagggg cttgagtaat gaaactgtta attaaaaact 301 ttcttcttaa agcaatatat atacgctact tcctcagaat aatgacctgg gaattcataa 361 ccgcgaagac accattcgga aatgggaatc attcgaacag gtcgcctgga ttaaggccga 421 tgccaaggca attctggcca ttcacgagca cgtgataacc aacaatgatc gattatcggt 481 gcagcacaac gactacaaca catggacgct caacatacgc agcgtcaaaa tggaggatgc 541 cggcaaatac atgtgtcagg tcaacacgga tcccatgaag atgcagaccg ccaccttaga 601 ggtggtcatt ccgccggaca tcatcaacga agagacctct ggagatatga tggttcccga 661 gggcggatcc gccaagctcg tctgccgagc acgcggtcat cccaaaccca agatcacgtg 721 gcgacgcgag gacggcaggg agatcattgc ccgcaatggc tcgcaccaga aaacaaaagc 781 ccaatcggtg gagggtgaaa tgctgacgct gtcgaagatc acgcgatcgg aaatgggcgc 841 ctacatgtgc atcgcctcca acggagtgcc gccgacggtg agcaagcgga tgaagctaca 901 ggtgcacttt catccactgg tgcaagtgcc aaatcaattg gttggcgccc ccgtcctcac 961 ggatgtcaca ttaatttgca atgtcgaggc atcgccgaag gccatcaatt attggcagcg 1021 cgagaatggt gaaatgatta ttgccggcga tcgttatgcg ctcaccgaaa aggagaataa 1081 tatgtacgcc atcgagatga ttctgcacat caaacgactg caatcgagcg atttcggcgg 1141 ctacaagtgc atctccaaaa atagcatcgg cgacaccgag ggcaccatcc ggctttatga 1201 aatggagcga cccggcactc agaaaaaaat tcgtgatgat gatctcaacg aagtgtcgaa 1261 gaacgaggtg gtgcaaaagg acacgcgcag cgaggacggg tcacgcaacc tgaacggaag 1321 gctctacaag gaccgggctc cggatcagca cccggccagc gggggcgacc ccgtgctcct 1381 cgtccgagga ccaaggcggc taatcggtat atttctatta gccttattgg ttttattaac 1441 ggcaatggcg gaggccgggc caaccacatt gttctgccgc acaaagggcg gcagacaaaa 1501 gaatgccggg gcaacgagtt tgaatgggcg gcggcaggat atgaaggata agaagtggag 1561 caagttctgg gaaagatcag cgcggagttg gagcagcggg gcgaaggcgg cagagtaaga 1621 ttattatagc ttaattcaat tgtaattata caaacaagat tatgatgcaa ggagctcctg 1681 ccccacatcc acacaaaaga gggcattaat caccccccta atcatctacg cccatgctaa 1741 ttgcaaaggg ggtggttagg agggtggtta agggggcagg gctaattgaa tgcatattaa 1801 atcaaaagga ggaaggagaa actaaagtgt cgtagttaag tggaaaagaa aacgcgttta 1861 aatgttacct cgttagtgga aaatgatgat ggaaaggatg aaggccccag tcccacaaaa 1921 ggaaagtcaa ctataaacaa tattgagatt aaaaatggtg ttcggttctt taaaaggctt 1981 tagctactct gaagtgaaaa cagaaaaaca aaaaaaaaaa cagtatgata cggtaatgga 2041 cattgatatg gatatttcta gatgtctaaa gaataagtca ggtttttttt tgcgttcatt 2101 caaaacttaa ttcgttgggt tttctagaag aaatatacgc atacataaac gcatctgtat 2161 gtattaagtg tttaatggaa agagttctgt atatatattt aaggcctgct caaagagaag 2221 gaaaatttat ggctaaaggg gaaaatgttt agacgatctt tgcaaactgt aaatatttat 2281 aaccttagtg atcccgaact attgtagttt tgttgttatc atggaaaaat ggctctattt 2341 tttggcccct ctgttgtcac cttcgttctc acggctcaaa agactaatgc ggaccctagg 2401 cttaagccaa ttttggaaac ccctaagaca ttaatccgct aaaactgtgt gtgtgtgatt 2461 tttagcttta aaaattaaac accgagttga aatataaaaa aaaaaattta aggcatgcca 2521 tttatgttcc tcatagaccc ttcggtgtgc tgagttcgaa tctggccata aaaatggaaa 2581 aaatccacct caaagttaga agcattatct acataatttg attatctgtg gtagtttaga 2641 attcagcaaa