PREDICTED: Drosophila takahashii enhancer of rudimentary (e(r)),

LOCUS       XM_070219140             961 bp    mRNA    linear   INV 09-DEC-2024
            transcript variant X2, mRNA.
ACCESSION   XM_070219140
VERSION     XM_070219140.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..961
                     /gene="e(r)"
                     /note="enhancer of rudimentary; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:108056019"
     CDS             195..509
                     /gene="e(r)"
                     /codon_start=1
                     /product="protein enhancer of rudimentary"
                     /protein_id="XP_070075241.1"
                     /db_xref="GeneID:108056019"
                     /translation="MSHTILLVQPGARPETRTYCDYESVNECMEGVCKIYEEHLKRRN
                     PNTPTITYDISQLFDFIDTLMDISCMVYQKSTNTYAPYNKDWIKEKIYVLLRQAAFSP
                     NA"
     misc_feature    198..491
                     /gene="e(r)"
                     /note="Enhancer of rudimentary; Region: ER; pfam01133"
                     /db_xref="CDD:460078"
     polyA_site      961
                     /gene="e(r)"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attttccggc caatcaattg ttttcctggc ttaagctagt gcacttgccc atttcgaggg
       61 agaattttcg catttgtcgg cagcaaattg gaaaataaaa gagcaattgg cccgcacata
      121 atcggcgaaa agcaaggact gaaagtctcg gaattcatac gacttggaaa aaaaccactg
      181 aaaacaaaat caccatgtcg cacaccatcc tactggttca gccgggcgct cgtccagaga
      241 cccgcaccta ctgcgactac gagagcgtga acgagtgcat ggagggcgtg tgcaagatct
      301 acgaggagca cctgaagcgg cgcaacccga acaccccgac catcacctac gacatcagcc
      361 agctgttcga cttcatcgac acgctgatgg acatcagctg catggtgtac cagaagagca
      421 ccaacaccta tgccccctac aacaaggact ggatcaagga gaagatctat gtgctgctgc
      481 gccaggcggc cttcagcccg aatgcctaac taaagatcaa aataccaaat aacccgatca
      541 taaactaagg agatgcgtga actcacgagg acaacatgat tttagggagg gaatcgacgc
      601 tgctgccgcc tgctaactac acattaatac gatcacaaca accaaggacg gcagacaaac
      661 aatgcaaaca caaagagaac gagaaactgt ttaacttaga aatggaaaac ttactttaca
      721 cgtactaata taatgtatat acacccaact ctgacaactg tgtgttttga atgagccatg
      781 ttcgcaggat aaggtgttct tatagctagc aatctgttgt ataaatactc taaatggcaa
      841 gcgttttttt ttgtgtatgt tccctttgcg ctagttttag tctaccagta tgtcaaataa
      901 taaatcaacg tgacttgtct ggtcaggata ttaaatatat gattactagc ctggctttat
      961 a