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PREDICTED: Drosophila takahashii Nostrin (Nost), transcript variant


LOCUS       XM_070219137            4726 bp    mRNA    linear   INV 09-DEC-2024
            X1, mRNA.
ACCESSION   XM_070219137
VERSION     XM_070219137.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4726
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..4726
                     /gene="Nost"
                     /note="Nostrin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 Proteins"
                     /db_xref="GeneID:108056090"
     CDS             26..3763
                     /gene="Nost"
                     /codon_start=1
                     /product="myosin-2 heavy chain isoform X1"
                     /protein_id="XP_070075238.1"
                     /db_xref="GeneID:108056090"
                     /translation="MGERKLNWPSTMNLHRFKRGGKYNTAMADLPQVPIGDSANNTNN
                     TGNTNNNTSVGANNNNNVSSNNNNHNSSGGAKGFLGRIKRYSVLGNRLGRRHLGSMNL
                     NPSTNDGDNSVSPSKLHTGSYNMTGSHSDDHRLEIGAPVLISTTTLDTDRFDVTEARL
                     KQIGGGIAMNSNIVRTLTPRSSDEDEFVDARSSPQEMESDENSKNQKETEEDTKKEPQ
                     QAEEKKDVKEEPEEPEEPEQFQTPKHEVVEEQQMVVPHEVKRPTTPVPTDMEPPMRRP
                     RIGRQQRQSQSVQNLHRSVTIYLHKSNSMVLDMNVTAPAKLGLDLNVPELPELFGASE
                     LSLAASDNQENNKENQPKPSAERSPIPNGGFLAQQPHFKSLDSFQLNSHSHSRSHLSS
                     HQSSRQSLACSSGGGESHGEYDFDLKSVSCQSLNPQNLFVSIDELQELSRQINETEDF
                     GKEIDLEYCTHRDQLKPSERRITLLKNKNQTLINFNHNKEKLRKGWHGMKHWLGEEGS
                     RIKEAVRQQTPLKRLAQSRSNLNQSTQDASRVSLSPDRSRREMTESCEDVTERTEMES
                     SVSHRNSEEDLSPHAKRFKDEGQNGFEELRRYVKQGGDFSKELIFVLQERADSELIYS
                     KSLSKLANKLNKAGREIPGSVADAWRGVATEMESRSDIHRQLAASLTDELVKPLKSVV
                     EGHHKARKTVESNVDKAARVLGEWRASEAKAKKASHTAARENEKLQDAMLDVRIQKSP
                     SIALLHQGPNKQAAEKELKSAEKDCVKLDNKRKKAEEAVKRADVEYYTLCVRAERARV
                     DWEMAVLRGSAQLQSSEQQRLGNMHNFAQQYARLISDMNPILGGLSTRLQPQLEACNV
                     AKDMQVVRHIRRNSEGPSEQLLPDFYCEHTTLAMNRERRKHALIKLLQLVKSDLERER
                     RSRDGLRGLSQSLNHQEHQNITDKLYHIRSMLTYLEGARLKLHSALLELDHKPRTTHP
                     LAQHIQITRDRTGLQQSILKVPNWLKNNDKSQTQQSTSMLAHDVTDITNTNHEDELPE
                     ENGSSHLHSSSNSNNNSNGSCTDISSVVKQFNRSKSNIETNFTSQPKIISTTNAAVAV
                     AASVKSKTLANLQDGHHQNHHNHNHHHQHHHHDRGQADGGSNQQDSDFDEFSSQDEDE
                     DELPEKSQEQPNPAIKAQMQTQHFYQNAQDLQKSQKDESGPILGRCKALYSYTPKLYD
                     ELELSPGDIIEVHAKQDDGWWLGALRNHIGIFPATYVEECA"
     misc_feature    1781..2518
                     /gene="Nost"
                     /note="The F-BAR (FES-CIP4 Homology and
                     Bin/Amphiphysin/Rvs) domain of Nitric Oxide Synthase
                     TRaffic INducer (NOSTRIN); Region: F-BAR_NOSTRIN; cd07658"
                     /db_xref="CDD:153342"
     misc_feature    order(1796..1798,1805..1807,1826..1828,1835..1840,
                     1847..1849,1856..1861,1868..1873,1880..1882,1892..1894,
                     1901..1903,1913..1915,1988..1990,1997..1999,2318..2320,
                     2330..2332,2405..2407,2417..2419,2426..2428,2435..2440,
                     2447..2449,2459..2461,2468..2470,2480..2482,2492..2494,
                     2501..2506,2513..2515)
                     /gene="Nost"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:153342"
     misc_feature    3596..3754
                     /gene="Nost"
                     /note="Src homology 3 domain of Nitric Oxide Synthase
                     TRaffic INducer; Region: SH3_Nostrin; cd11823"
                     /db_xref="CDD:212757"
     misc_feature    order(3611..3613,3617..3619,3626..3628,3638..3640,
                     3692..3697,3734..3736,3740..3745)
                     /gene="Nost"
                     /note="peptide ligand binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:212757"
     polyA_site      4726
                     /gene="Nost"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttcggaagtg aaattgaaaa tagaaatggg cgagaggaaa ctaaattggc cgtcgacgat
       61 gaacctgcat agattcaagc ggggcggcaa atataatacc gccatggccg atctgcccca
      121 agtgcccatc ggggatagtg ccaataatac gaataatacg ggaaatacca ataacaatac
      181 cagtgtcggt gctaataaca acaacaatgt gagcagcaat aacaacaacc acaattccag
      241 tggcggagcc aagggatttc tgggcaggat caagcgatac tcggtgctgg gaaatcgcct
      301 gggacgtcgc catctcggca gtatgaatct gaatccatcg accaacgacg gcgataactc
      361 agtttcgccc agtaaacttc acaccggcag ctacaacatg accggcagtc attcggatga
      421 ccatcgcttg gagatcggtg ctcccgtttt gatatccacc accactctgg acacggatcg
      481 tttcgatgtc accgaggcga ggctcaagca gattggcggc ggcatagcca tgaactcaaa
      541 catagtgaga accctgacgc ccaggagttc ggatgaggat gagtttgtgg acgccaggag
      601 cagtccgcag gagatggaga gcgatgagaa tagcaagaat cagaaggaaa ccgaggagga
      661 taccaagaag gaaccacagc aggcggagga gaaaaaagat gtaaaggaag aaccagaaga
      721 acccgaggag ccggaacaat ttcagacccc caaacacgag gttgtggagg aacagcagat
      781 ggttgtccct catgaggtga agcgacccac aaccccagta cccaccgata tggaacctcc
      841 aatgcgacga cctcgcattg gccgccagca aaggcaatcg cagtccgtgc agaatcttca
      901 tcgcagcgtt acgatctacc tgcacaagtc gaattcgatg gttctggaca tgaacgttac
      961 ggcaccggcc aaactgggac tcgatctgaa tgtacccgag ttgccggaac tctttggcgc
     1021 cagcgaactc agtttggcgg ccagtgataa tcaggagaat aataaggaga atcaaccgaa
     1081 gccatccgcc gagcggtcac ccataccaaa tggtggcttc ttggcccaac agccgcactt
     1141 caagagcctg gactcgtttc agctcaactc gcactcgcac tcccggtccc acctgagttc
     1201 ccatcagagt tcccgccaaa gtttggcctg cagcagcggc ggaggcgaaa gccatgggga
     1261 atacgacttt gatctcaagt cggtcagctg ccagagcctc aatccccaga atctctttgt
     1321 gtccattgac gagctgcagg agctgtctcg tcagatcaac gaaaccgagg actttggcaa
     1381 ggagatcgat ctggagtact gtacgcatcg cgatcaactg aagcccagcg agcgcaggat
     1441 tacgctgctg aagaacaaga accagacgct gatcaacttc aatcacaaca aggagaagct
     1501 gcgcaagggc tggcacggca tgaagcactg gctgggcgag gagggctcca ggatcaagga
     1561 ggcagtgcgt cagcagacgc cgctcaagcg tctggcccaa tcgcggagca atctcaacca
     1621 gtcgacccag gatgccagtc gcgtatcgct gtcgccggat cgcagtcgtc gcgaaatgac
     1681 cgagagctgc gaggatgtca ccgaacgcac cgaaatggag tcgtccgtgt cgcaccgcaa
     1741 cagcgaggag gatctgtcgc cgcatgccaa gcggttcaag gatgagggac agaacggctt
     1801 cgaggaactt cggcgatatg taaaacaggg cggcgacttc agcaaggagc taattttcgt
     1861 cctgcaggag agagccgact cggagctcat ctactccaag tcgctgtcga agctggccaa
     1921 caagctgaac aaggccggca gggagatccc cgggagcgtg gccgacgcct ggcgtggagt
     1981 ggctacggag atggagagcc gcagcgacat ccatcgccag ttggcggcct cgctcaccga
     2041 tgagctggtc aagccgctca agagcgtcgt cgaaggacac cacaaggcac gcaagacggt
     2101 cgagagcaat gtggacaagg ctgcccgagt gctgggcgaa tggcgggcca gcgaggcgaa
     2161 ggccaagaag gcctcccaca cggcggcccg cgagaacgag aagctgcagg acgcaatgct
     2221 ggacgtgcgc atccagaagt cgccatcgat cgccctgctc caccagggcc ccaacaagca
     2281 ggccgccgag aaggagctca agtcggcgga gaaggactgc gttaagttgg acaacaagcg
     2341 caagaaggcc gaggaggcgg taaagcgggc ggatgtcgag tactacaccc tgtgcgtccg
     2401 tgcggagcgt gcccgtgtcg actgggagat ggccgtgctg cgtggaagtg cccagctcca
     2461 gagcagcgag cagcagcgac tgggcaatat gcacaacttt gcccagcagt acgcgcgtct
     2521 catctcggac atgaatccca ttctgggtgg cctgagcacc cggctgcagc cgcagctgga
     2581 ggcctgcaat gtggccaagg atatgcaggt ggtgcgccac atccgccgca actcggaggg
     2641 tccctcagag cagctgctgc ctgatttcta ctgcgagcac accacgctgg ccatgaaccg
     2701 cgagcgccgc aagcacgccc tcattaagct gctccaactg gtcaagtcgg acctggagcg
     2761 cgagcgccga tcccgcgacg gattgagggg cctgtcgcag tcgctcaacc accaggagca
     2821 ccagaatatc accgacaagc tctatcacat ccgctccatg ctgacctatt tggagggcgc
     2881 ccgcctcaag ctgcactcgg ccctcttgga gctggaccac aagcccagga ccactcaccc
     2941 actggcccag cacattcaga tcacccgtga ccgcactgga ttgcagcaga gcatcctgaa
     3001 ggtgcccaac tggctaaaga acaacgacaa gtcgcagacg cagcaatcga ccagtatgct
     3061 ggcgcacgat gtcaccgata taaccaatac taaccacgag gatgagctgc ccgaggagaa
     3121 cggctcctcg cacctgcaca gcagcagcaa tagcaataac aacagcaacg gctcctgcac
     3181 ggacatcagt tcggtggtga agcagttcaa ccggagcaag agcaacatcg agaccaattt
     3241 caccagccaa ccaaagataa tctcgactac aaatgccgcg gtggccgtcg ccgcgtccgt
     3301 taagtccaaa actctggcca atctccagga tggtcatcat cagaatcacc ataatcacaa
     3361 tcaccatcac caacatcacc atcatgatcg cggccaggcg gatggtggat ccaatcagca
     3421 ggactcggac ttcgatgagt tcagctcgca ggacgaggac gaggatgagc tgccggagaa
     3481 gtcacaggag cagcctaatc cagccatcaa ggcgcaaatg cagacgcagc atttctatca
     3541 gaatgcgcag gatctgcaga agagccagaa ggacgaatcc ggtccgatat tggggcgctg
     3601 caaggcgctc tacagctaca ccccgaagct ctacgacgag ctggaactga gtcccggcga
     3661 catcatcgag gtgcatgcca agcaggacga cggctggtgg ctgggcgccc tgcgcaacca
     3721 catcggcatc tttccggcca cctatgtgga ggagtgcgcc taggatcgct ccaggattcc
     3781 aggatccctc catagttata agtgcgaatg aacgagtgcg actgccaaat gagtgcgtgt
     3841 gttgtggagc gatttgtttg acataaaacc attgggagga gaaggtaatc ctcgggagag
     3901 tcaaggctat ttttgaaatt actgccaata ttttctatct atcttaatat cgatttatat
     3961 tcgacgaaca aaaattacag gcactagatc aactttgaaa ctgccaacat tttctataaa
     4021 ccaaatacca aatttacacg tattttcaac ccacaagaaa caacgaagaa acacttgcta
     4081 ggggatattt tctttaaaat caaaaaagtt acatttgctt agatttctgc gtaattgtca
     4141 gatgaaaatc atagttattt ttttcacaag aaaaatttaa attcgaaaga aagttaagaa
     4201 atatttacaa ttcaagttac atcattttgg acaaaaacta agagcgaaaa tgaatatctt
     4261 atgttttttt ataaacctat ttagccattg gaaaaagcga acagaaacag aaactctttt
     4321 ttcatggtaa tattcttggt agacaagtaa aaaaatgatg ttgttcaaac gaaatcataa
     4381 cagcacagaa ctaacgatct ttcaatattg aaaatgctga cattttgcct ttgagcaaat
     4441 actttttgat ttcttaaaga tagtccaagt gacgagtact ttttgagttt tgccaataga
     4501 accgtttgcc aatagaaccg tttttaattt gtagccagac aaaaaacacc aaaaattaag
     4561 cctataattt agtttcctaa tttgcttata aggattattt attttctcct gcgtttattt
     4621 atttcaaaca aatcgatcta ctttagtgat acattttaag catactatgt aatctacgag
     4681 taacgattgt attaaatttt atttttttta tttttttaac taccaa