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LOCUS XM_070219114 5310 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_070219114 VERSION XM_070219114.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5310 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5310 /gene="tbc" /note="trabuco; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:108068107" CDS 594..4154 /gene="tbc" /codon_start=1 /product="small G protein signaling modulator 1" /protein_id="XP_070075215.1" /db_xref="GeneID:108068107" /translation="MVQTSADGSDFKERLIATVKKEVKQLMEEAVTKKYVHEESSSVT SLCGAVEACLSQGLRRRALGLFKTSSTTALLHKIAKSCPEAEHISKMVQEIEANDPSK RSSSSSDSFQRPPMLKKSSSNSMSTGNNAVASTSSASASISVSASTSSMSLASMKYLW IRLALYEKRLTKIIEYLVCNASSFYDRDSLVADPDYGSILSSLLVGPCALEFTRAKTA DHYWTDPHADELVQRHRISSCRRSSSTCSRPAIINFKRSLNTSSDDASSGSFKSIASA SVAKDYVESLHQNAKATLLYGKNNVHVLPNGVANPMPGYLSLHQHIQTLTIKWTPNQL MNGGYAEEEEEDIDKDLFWAYALNINVDEIVYVHCHQSRREDSGGIVILVGHDGVQRP PIHFPEGGHLQQFLTCLETGLLPHGQLDPPLWSHRGIGKMLLWQRNMRRRILPAVREA TGAGAGAGPPSEDPGIDFVFRIVSKSRHEEFAAAHSILDFVRSAPRRAQLSSCSTTGS SDCSNKSLSIDQCPLESPLTLQQQQQQQQLVQSQNTSIEAVCSTMRRQIISRAFYGWK AYCRHLTTVRTHLSGLVHARIMPDGEAEGTTTEATEGTETTESTESLCTSVPEKRGLT RERWEGLHEDGVMEDEMEFYRIIYYGGVRPEMRQEAWPYLLGHYAFGSTAEERRKQDE TCKHYYETTMSEWLAVDAIVQQREKEKTARAVAKLSSGSNSGNEKTVRAADLEAGGEL ENEVFEDISDISDPGDLEFDEQQQQLHQQEATGGHHLSVKPIPRAMKTSTDSGHVDEG DNFNELDEDEEEEQKQDEGNKEPRPEEPLNLEPSCSSNSTASSYETVGPGGTGGHQPQ TSDTRSVLSPEYLSADDLQLPEDEDAVRPTTSQQAKAAVIITKASVDIANWEQRSPRA EEADRMPTVEEQAAEVAGGGGGGGVNLDALPQPNSACPSPASSNGGVYSSELLEQFGL NLHRIEKDVQRCDRNYWYFANENLDKLRNVISTYVWEHLDVGYMQGMCDLVAPLLVIF DDESLSYSCFCKLMERMIENFPSGGAMDMHFANMRSLIQILDSEMYELMDSNGDYTHF YFCYRWFLLDFKRELIYDDVFAVWEVIWAAKHVASSHFVLFLALALLETYRDIILSNS MDFTDVIKFFNEMAERHNTKALIELARSLVLQLQMIIENK" misc_feature 654..1235 /gene="tbc" /note="RUN domain found in small G protein signaling modulators, SGSM1, SGSM2, and similar proteins; Region: RUN_SGSM1_like; cd17687" /db_xref="CDD:439049" misc_feature 1467..2021 /gene="tbc" /note="Rab-binding Pleckstrin homology domain (PH) of small G-protein signaling modulator 1 and similar proteins; Region: PH_RUTBC; cd15784" /db_xref="CDD:275431" misc_feature 3414..3947 /gene="tbc" /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs; Region: TBC; smart00164" /db_xref="CDD:214540" ORIGIN 1 tcgcgtgcac actcggcgct cttcgtgggg aaaaagaagc ctggaaaagc atccgatttg 61 cctgtttttt ttttctgttc cgttgtcgct ggctttctag cctctgagtt tgctgctggc 121 ttggcagccc agctagttca gttggtcagc aaggcagtga ggcagcagtg agtaagtgag 181 tcactgtgtg cgctagttaa gtccaagttc gtcctccaaa tgggcgagcg ggaggcgaaa 241 gtctttgccc caccaccccc cttcctgcgg cggcagccaa attatttata agggacaaca 301 caacagcaac tagttggaaa acaacaaaaa aaaaaagaag gagaggaaag gaaagtaaag 361 gaaagaaagg aaaagtaaag gaaaatcgcg gaggaaaagc gaagaggaaa acgcacgctg 421 ccacaggcga cactttgctc tcgtcggcat acgcaaaaca aatacaaatt ttcgaaatac 481 attttacgcg cgcgtgaaga ggaacggaat tacggcgaaa agctttgggc aatctccgca 541 agccccaaac acacgcccac gcgcagccag gaaaacgcta cgaacgccac gaaatggtgc 601 aaaccagtgc agatggctcc gacttcaagg agcggctgat agccaccgtg aagaaggagg 661 tgaagcagct gatggaggag gcggtgacca agaagtacgt ccacgaggag agcagctcgg 721 tgacgtcgct gtgcggcgct gtggaggcct gtttgagcca gggactccgt cgccgggctc 781 ttgggctatt caagacctcc tcgacgacgg cgctgctgca caagatcgcc aagagctgtc 841 cggaggcgga gcacatcagc aaaatggtgc aggagatcga ggccaacgac ccgagcaaga 901 ggtcctccag cagcagcgac agcttccagc gaccgccgat gctcaagaag agcagcagca 961 actcgatgtc caccggcaac aatgcggtgg ccagcacctc ctccgcctcc gcctccatca 1021 gcgtcagtgc cagcacctcc agcatgtcct tggccagcat gaaatatttg tggattcggt 1081 tggcgctcta cgagaagcga ctcaccaaaa tcatcgagta tctggtttgc aatgccagca 1141 gcttctacga tcgcgactcc ctggtcgccg atccggatta tggatccatt ctcagctcct 1201 tgttggtggg tccttgtgcc ctggaattta cgcgggccaa gacggcggat cactattgga 1261 ccgatccgca tgcagatgaa ctggtgcaac gccaccggat cagctcgtgc cgccgatcct 1321 cgtcgacctg ctcccggccg gcgatcatca acttcaagcg gagcctgaac acgagctccg 1381 acgacgcgag cagcggctcc ttcaagtcga tcgcctcggc cagtgtggcc aaggactacg 1441 tggagtcgct gcaccagaat gccaaggcca cgctgctcta cggcaagaac aatgtgcacg 1501 tgctgcccaa cggggtggcc aatccgatgc ccggctacct gagtctgcac cagcacatcc 1561 agacgctgac gatcaagtgg acgcccaacc agctgatgaa cggcggctac gccgaggagg 1621 aggaggagga catcgacaag gacctcttct gggcctacgc cctgaacatc aacgtggacg 1681 agatcgtcta cgtgcactgt caccagagtc gccgcgagga cagcggcggc atcgtcatcc 1741 tcgtcggcca cgacggcgtc cagcggccgc ccatccattt cccggagggc ggacacctgc 1801 agcagttcct cacctgcctg gaaacgggcc tcctgcccca cggccagctg gatccgccgc 1861 tgtggtcgca tcgcggcatc ggcaagatgc tcctctggca gaggaacatg cgccggcgca 1921 tcctgcccgc cgtccgagag gcgacggggg cgggggcggg ggcggggccg ccttcggagg 1981 atccgggcat cgacttcgtc ttccgcatcg tcagcaaaag ccgccacgag gagttcgctg 2041 ccgcccactc gatcctggac tttgtgcgca gtgctccgcg gcgggcgcag ctgagcagct 2101 gctccaccac cggcagcagc gactgctcga acaagagcct ctccatcgac cagtgtccgc 2161 tggagtcgcc gctgaccctc cagcagcagc agcagcaaca gcagctggtc cagtcgcaga 2221 acaccagcat cgaggcggtc tgctccacga tgcgccgcca gatcatctcg cgggccttct 2281 acggctggaa ggcctactgt cgacacctca ccacggtgcg cacccacctg tccgggctgg 2341 ttcacgccag gattatgccg gacggagagg cagaaggaac aacaactgag gcaactgaag 2401 gtactgaaac cacggaatca accgaatccc tctgcacatc ggttccagag aagcgcggtt 2461 tgacccggga gcgctgggag gggctgcacg aggacggggt gatggaggac gagatggagt 2521 tctaccgcat catctactac gggggcgtcc ggccggagat gcggcaggag gcgtggccgt 2581 atctgctggg acactatgcc ttcggctcca ccgcggagga gcggaggaag caggacgaga 2641 cgtgcaagca ctactacgag acgacgatga gcgagtggct ggcggtggac gccattgtgc 2701 agcagcggga gaaggagaag acggcgcggg cggtggccaa gctgagttcg ggcagtaatt 2761 ccggcaatga gaagacggtc agggcggcgg atctggaggc cggtggcgag ctggagaacg 2821 aggtgttcga ggacatctcc gatatttccg atcctgggga tctggagttc gatgagcagc 2881 agcagcagct gcatcagcag gaggcgactg gtggccatca cctgagtgtg aagcccattc 2941 ccagggccat gaagaccagc acggattcgg gtcacgtgga cgagggtgat aactttaatg 3001 agctggacga ggatgaggag gaggagcaga agcaggatga gggcaacaag gagccaaggc 3061 cggaggaacc actcaatctg gagcccagct gctcctccaa ctccacggcc tcctcctacg 3121 agactgtggg tcctggcggc actggcgggc accagccgca gaccagcgac acgcgcagcg 3181 tcctcagccc cgagtacctg agtgccgacg atctgcagct gccggaggac gaggatgcag 3241 tgcggccgac gacatcgcaa caggccaagg cggccgtcat cattaccaag gcctccgtgg 3301 acatagccaa ctgggagcag cggagtcccc gggcggagga ggcggaccgc atgccgaccg 3361 tggaggagca ggccgcagaa gtagccggcg gaggaggagg aggaggcgtc aatctggatg 3421 cactgccgca gcccaactcc gcctgcccct cgccagccag ctccaatgga ggtgtctaca 3481 gtagcgaact tctcgagcag ttcggcctga atctgcatcg gatcgagaag gatgtgcagc 3541 ggtgcgacag gaactactgg tacttcgcca acgagaacct ggacaagctg cgcaacgtga 3601 tctccacgta cgtgtgggag cacctggacg tgggctacat gcagggcatg tgcgacctgg 3661 tggcgcccct cctggtcatc ttcgacgacg agtcgctcag ctacagctgc ttctgcaagc 3721 tcatggagcg catgatcgag aacttcccca gcggcggggc catggacatg cactttgcca 3781 acatgagatc cctcatccag attctcgact cggagatgta cgaactgatg gactcgaacg 3841 gcgactacac gcacttctac ttctgctacc ggtggttcct gctcgacttc aagcgggagt 3901 taatctacga tgatgtattc gcagtttggg aggtcatttg ggcggccaag cacgtggcct 3961 cgagtcattt tgtcctgttt ttggccctgg ccctactgga gacctatcgc gacatcatcc 4021 tctcgaacag catggacttt accgatgtca tcaagttctt caatgaaatg gccgagcgcc 4081 acaataccaa ggcgttgatc gagttggccc gaagtctggt cctgcagctg cagatgatca 4141 tcgagaataa gtaggggaac ccatggagaa cccaactata taggggcgtt atgctagaat 4201 ctagatcgta gttcagtcaa atttcgtttg ccaatgtcga tgtcttcgct ataaagtatt 4261 cgtacccaag aaaaccaaag aaatcccact aactgaagct gtaactgtag tcctaatggt 4321 taattgtact cttatgtcta cgtaagttct tcctaaactc tctacgcata tccccagaaa 4381 tagaggaaac cagaaaacag gggcagcaaa tgcaaatgca aaagactctg agcaaaagaa 4441 tgaaatctta tacttatata tacgatacga gatgaatcct tatacgactg tatagacaac 4501 tgttactcac acactgcact cgaacctttt tgttttcagt gctgtgctgg ttttttgtac 4561 agaaatcaaa tatcatatta tatcaaaggc aaataaaaat tatcaatata tatgtacaca 4621 agaaaagtgc gttttagcag tgacttcaga tcaaccagtg ttatttattt tagctaattc 4681 aaataaatat cgatattttc tctctttatt gtttatagat tttttccatc atcgatgttc 4741 ttaaagattt tgatctgaag gggctgtatt agcaaatcgc acgttagaat ataaataaaa 4801 tacacacata tagaattccg aaagcgaacc cgactttcaa gcaaacccaa gcaaaggcaa 4861 ctaaactctg taccagcgaa aagtatccaa ttgtgtgtaa caatcaaggc aacaataagt 4921 caagtaccct ataatatcca tatatacacg gcatatagtc ggatcttgtg tgtctattat 4981 ctacatatat gtgtactttt aagctgccag gccaaaccga gtttcatctt catttaatcg 5041 tatcttattt ttatataata tacatattta tatatctatt ttccccactg tgtgatctct 5101 ctctctacac cgagtataaa tgttgtggat tatctttata ccctaattat acttgtactc 5161 tttgtaaacg tacctttccc gggacaaaca ggaggtagac gatacgatac ctcggctcca 5221 ctttatctca attacaaaaa ccaacaatat atatatatat acacccccaa aatatgaata 5281 tgattatata tatatatagt ataaatgtat