PREDICTED: Drosophila takahashii asperous (aspr), transcript

LOCUS       XM_070219112            1552 bp    mRNA    linear   INV 09-DEC-2024
            variant X3, mRNA.
ACCESSION   XM_070219112
VERSION     XM_070219112.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1552
                     /gene="aspr"
                     /note="asperous; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:108057293"
     CDS             115..1332
                     /gene="aspr"
                     /codon_start=1
                     /product="adhesive plaque matrix protein 2 isoform X3"
                     /protein_id="XP_070075213.1"
                     /db_xref="GeneID:108057293"
                     /translation="MQQLLLVALVAVAIGSLPQLAVAQQSYSSGCSGNPCGVNAVCQE
                     ASGGRPVCSCPPGFSGNPLTHCNRGECLDNVDCRGDLQCKDNRCVNPCVGACGIGSNC
                     DARNHVAVCSCPAGYNGDPYHACHLNDPEEQCHPSPCGVNTKCEIINGVPTCSCNHGY
                     VGNPLSGCRHECDHDGDCSGRDMCSTNFKCVPACGQCGTGATCRTVSNHRAVCECPKG
                     YIGSPYTECRPECYGDADCPAGRPACFYGICKNTCEGACGIGADCNLRGLTPVCSCPR
                     DMTGDPFVRCRPFTKEDLCDPNPCGNNAICVPGHDNTGRERPVCNCLPGHTGNPLSHC
                     SRGECLSNNECPDHRACINYQCIDPCIGKCATGASCEPKAHLAVCRCPQGQSGDALVS
                     CRQTRTFPVAKYH"
     polyA_site      1552
                     /gene="aspr"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acattaccca gtgaaaaaac ggaaccattt acgaatttat atattttttt tgttttttat
       61 tttacgttgt ttatttgctg tagtgcgagt gagttctaag aacttaaccc aaaaatgcag
      121 cagctcctcc tcgtggcact ggtggcggtg gccattgggt ccttgcccca actagccgta
      181 gcccaacagt cgtacagcag cggatgcagc gggaatccgt gcggcgtgaa tgccgtgtgc
      241 caggaggcct ccggaggacg tcctgtttgc tcctgcccgc ccggattcag cggtaatccg
      301 ctcacccact gcaatcgcgg cgagtgcctg gacaacgtcg actgccgggg cgacctgcag
      361 tgcaaggaca atcgctgcgt taatccctgc gtgggtgcct gtggcattgg ctcgaattgt
      421 gacgcccgca accacgtggc cgtgtgcagc tgcccagcgg gctacaatgg cgacccctat
      481 cacgcctgcc acctcaacga tccggaggag cagtgccatc cgagtccttg cggcgtgaac
      541 accaagtgcg agatcatcaa cggcgtgccc acctgttcgt gcaaccatgg ctacgtgggc
      601 aatccgctga gcgggtgtcg ccatgagtgc gaccacgacg gcgactgcag cggccgggac
      661 atgtgctcga ccaacttcaa gtgcgttccg gcctgcggac agtgcggcac tggcgccacc
      721 tgccggacgg tcagcaacca ccgggcggtg tgcgagtgcc ccaagggata tatcggcagt
      781 ccctacacgg agtgccggcc ggagtgctac ggagacgccg actgtcccgc cggacgaccc
      841 gcctgcttct acggcatctg caagaacacc tgcgagggag cctgcggcat cggggccgac
      901 tgcaacctgc gcggcctgac gcccgtctgc agctgtccgc gggacatgac cggcgacccc
      961 ttcgtccgct gccgaccctt caccaaggag gatctctgcg accccaatcc gtgcggcaac
     1021 aacgccatct gcgtgcccgg ccacgacaac accgggcggg agcgacccgt ctgcaactgc
     1081 ctgccgggac acaccggcaa tccgctgagc cactgcagcc ggggtgagtg cctgagcaac
     1141 aacgagtgtc ccgaccaccg cgcctgcatc aactaccagt gcatcgatcc ctgcatcggc
     1201 aagtgcgcca ccggtgccag ttgcgagcca aaggcccatt tggcggtctg tcgctgtcca
     1261 caaggacaat cgggcgacgc tttggtgtcc tgccgccaga cgcgcacctt cccggtggcc
     1321 aagtaccact agggaggatt ccggaggagg agtcccgatg cagccgcact gcctgccagt
     1381 cccttagtca cctttcgtcc ctgcctcaac ctgcacacca gtctatctgt tcgtcccctc
     1441 gaattcgcct tcttcccata ctagtcgttg cattaacctc gtactctctc tctaatcgaa
     1501 gcgaacaaaa atgtgttgac aacaatcaat aatacaagta aacattaaac aa