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PREDICTED: Drosophila takahashii chronophin-like (LOC108054436),


LOCUS       XM_070219104            1331 bp    mRNA    linear   INV 09-DEC-2024
            transcript variant X1, mRNA.
ACCESSION   XM_070219104
VERSION     XM_070219104.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1331
                     /gene="LOC108054436"
                     /note="chronophin-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:108054436"
     CDS             7..969
                     /gene="LOC108054436"
                     /codon_start=1
                     /product="chronophin-like isoform X1"
                     /protein_id="XP_070075205.1"
                     /db_xref="GeneID:108054436"
                     /translation="MPIDWEFNNELNEVKHILELSEDERRNFVDSFDRVFSDIDGVLW
                     TLKDPVPRAAEGYAALERRGKQLTYVTNNSVLAEEQCLKRFAKIGMKVQPEQIWHPAK
                     SIAAYLSGIKLEGLIYVIASQPFKEVMREAGFHILDGPNESIEGSFASLAEHIFDRQE
                     VRAVVIDVDFNLSYPKLARAHQYLRHPDCLLIGGATDILLPVAKDVNILGPGAFASML
                     ADASGRPLEAITLGKPGRQLGDLLIGHLKIEQPSRVLMIGDMLAQDIGFGRQCGFQTL
                     LVLSGGCTRAEFLGEKDPARLPDFYADSVADVAQLLDGAPRAHV"
     misc_feature    106..927
                     /gene="LOC108054436"
                     /note="haloacid dehalogenase-like superfamily
                     phosphatases, UmpH/NagD family; Region:
                     HAD_Pase_UmpH-like; cd07508"
                     /db_xref="CDD:319811"
     misc_feature    order(118..132,214..225,595..597,703..705,778..786,
                     793..798)
                     /gene="LOC108054436"
                     /note="active site"
                     /db_xref="CDD:319811"
ORIGIN      
        1 gttggaatgc caatcgattg ggaatttaat aacgagctca acgaggtcaa acacattcta
       61 gagctgagcg aggatgagcg gcgcaacttt gtggactcct tcgaccgggt gttcagcgac
      121 atagacggtg tcctgtggac cctgaaggat ccggtgccgc gggccgccga gggatacgct
      181 gccctcgagc ggaggggcaa acagttgacc tatgtgacca acaacagcgt gctggcggag
      241 gagcagtgcc tcaagcgctt cgccaagatc gggatgaagg tgcagccgga gcagatctgg
      301 catccggcca agtccatcgc agcctatctg agcggcatta agctcgaggg cctcatctac
      361 gtcatcgcca gccagccgtt taaggaagta atgcgcgaag cgggtttcca catactggac
      421 ggacccaacg agtccatcga gggaagcttc gccagcctgg cggagcacat tttcgaccgg
      481 caggaggtgc gcgccgtggt catcgacgtg gacttcaacc tgagctatcc caagttggct
      541 cgagcgcatc agtatctgcg tcatccggat tgcctgctga ttggcggcgc caccgatatc
      601 ctgctgcccg tggccaagga cgtgaatatc ctgggaccgg gggcgtttgc ttccatgctg
      661 gcggatgcca gtggcaggcc attagaagcc attacactgg gcaaaccggg acgccagctg
      721 ggcgacctgc tcatcggtca tctcaagatc gagcagccca gtcgggtgct catgatcggc
      781 gacatgttgg cccaggacat tggctttggc cgccagtgcg gcttccagac gctgctcgtc
      841 ctcagcggcg gctgcacgcg ggcggagttc ctcggggaga aggatcccgc ccgcctgccg
      901 gacttctatg cggacagcgt ggccgatgtg gctcagctgt tggacggcgc acccagggca
      961 catgtctaat taatctctaa tttataattt atcccttttc cgaggattga agtttccttg
     1021 gaatatatgc atgaccatct tgcaagtccc atttgtatct ataggcattt aatatttaat
     1081 attaagtcct tgccatatta tttagccttt tttttcattt ttctattgta attttcagtg
     1141 aattcttaag attttttttt tgcctgaagg taaaaattat ttcattattt caaacgaatg
     1201 aaattggtta gctttgaaga accataatat tgtattattc gtattgtatt gtaatgaata
     1261 ctttattaat ataattttta aaaatattta atttaaatcg ttctatctag cattattgtt
     1321 ttttcttttt t