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LOCUS XM_070219097 6391 bp mRNA linear INV 09-DEC-2024 protein Shaker (LOC108066900), transcript variant X6, mRNA. ACCESSION XM_070219097 VERSION XM_070219097.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6391 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6391 /gene="LOC108066900" /note="potassium voltage-gated channel protein Shaker; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108066900" CDS 2565..4508 /gene="LOC108066900" /codon_start=1 /product="potassium voltage-gated channel protein Shaker isoform X4" /protein_id="XP_070075198.1" /db_xref="GeneID:108066900" /translation="MTMWQSGGMGGHGSQNNPWMKLMGIVHKERRHTENVQSQSGSNE RNLNQSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRT LNQFPDTLLGDPARRLRYFDPLRNEYFFDRSRPSFDAILYYYQSGGRLRRPVNVPLDV FSEEIKFYELGDQAINKFREDEGFIKEEERPLPDNEKQRKVWLLFEYPESSQAARVVA IISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCII WFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLATVVAEEEDTLNLPKAPVS PQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELGLLIFFLF IGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDMTPVGVWGKIVGSLC AIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQNFNHVTSCPYLPGTLGQHMKKSS LSESSSDMMDLDDGVESTPGLTDTHPGRSAVAPFLGAHQQQQQQQQQPVASSMSMSID KQLQHPLQQLTQTQLYQQQQQQQQQQNGFKQQQQQHTQQQQQQSHTINAAASAAAATS GSGSSGLTMRHNNALAVSIETDV" misc_feature 2817..3197 /gene="LOC108066900" /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily; Region: BTB_POZ; cl38908" /db_xref="CDD:453885" misc_feature 3204..3992 /gene="LOC108066900" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" ORIGIN 1 cacattatag tctccagcgc ctagtcgttg ggtatacggc gcgatgtaca gagccgcgac 61 acgcgacacg caactagcag cagcagcagc agcagcacta gcagcagcaa cacttgcaac 121 agcaacagca acacttgcaa cacagcaaca gcagccggaa gaccaaacga ccactgagcc 181 gcccttttaa gtcgtgttag tagaaatcgt cgttgtcgaa atcgtcgcca aaaaaataaa 241 ataaataaaa taaatacaaa attccgctaa aaccgtcgca gcctcctacg aattcttcta 301 ttttttttac atttttttcc agtgctcgcg acgcgaaaca aaaaatcatt tgaaatctaa 361 caaaaaatct aaaaaaaaag aaaagtaata tctctttcca acttccaaac aaccagaagt 421 cctctgacca cccagcatac ctttttgagg cggaaaagga cacgaatcac acccctaata 481 cagggccaaa tgagctggaa atgtccaagt ggccgatggc gatggtgatg atggtgctat 541 cgcctttgga tgggccatcc aggaagcaaa agcaacaaga acggtggcaa ataagccaaa 601 ttaacgagat cccgaggagg catatataca acatcaacat ctcatcgttc tcatcatcag 661 ttgaggaatc cgaacaatgc cctagaaaga aagccattca aatcgcccaa gtaatcggca 721 aataatcgag aatagtcgtc gtttcgttaa gattcgtttg tttttttttt cggttacggt 781 ttcggtttcg gttcgcgagt gctaccactt ccgtttccgc tttcgtttcc gccttcgtcc 841 ttcgcgtctt gtgtgtatgt gtgtgtgcct ctgcttctct gttcctgttc ctggttctgt 901 gtctgcgtgt gaattaccag atatatctat ctatctatca atattttttt tgttgttttt 961 tctctccatc caatcccgcc ctcaaaaata aagttctaaa aacataaaaa cttaagaatc 1021 gagagatgaa atatgcgaat catgtgggat aaatgagaca actgagtgtt gcggtcgagg 1081 gcagttccag ttgcagtttc agttccccag cccgaaccat tctacactgt gcatcgtgag 1141 tgggactcga atcgcagcca ttctcgctcc gccccgccct ctgtcctccg cccccagcat 1201 tatcaaatta tcaaagccaa ctacggatat taatagttct aattctaatc gcaaataatt 1261 atcaatagca atctacgagt caataataat acaatacata ttcgaaacat aactaccagc 1321 tcagacggca cgcgggaaag caataagctc cctgtgcacg taaattctca tatcgtcgtt 1381 taatcgcctt cctgccctat gcactatatc agcaacaaca acaataacaa caacaactac 1441 acctatcact tcaacaacaa aagagtcaac caaaaagcaa tcgtaaaagc aaataactag 1501 taaaagttgt aattggaaca aatgttgtac atacctacgg atacggataa attgtaaata 1561 aattgtatga tattgcaaaa atacccgtta caaaaatagc caaaatctca tcttatgtcc 1621 gttgtaacat atatcaaatt tttggttttt ggtttcgcac caaaaatgca ttcttctttt 1681 agccaaataa ttgcaattta gattcaagtg ttacgggtat caaatagtcg atcttctcga 1741 ctatcgataa ctcaatcaaa caaatcgatc aataatcgga cttaattccc cattcgatag 1801 aaccttttgg ccagcaaaat ttagctagaa gacaaaatat acaaggagag aaatttttgc 1861 atactaaatt taatgaacct atacggaaat tacaaaaggc aaggtaaagg aaagcagaga 1921 cccaacaata attagcatta aaaattggtt aacaagcgga agatcccgaa atatcgaaga 1981 gaagggataa gttgtacgcc cattgtgatt attaatttta gacataggcc aagaaaccaa 2041 acagcaattc gaggagaaag caacagcact acacgaccaa aaagcaaagc aaaagcaaga 2101 gagaagcaaa agcaaaagca acattagccg cccaaagaaa cttgaaagca ttagccaaaa 2161 aactaaaact aaaaaaaaac caaaaaactc ttagttcaat tccatccaaa aacaaaaacc 2221 caatctcttt cggctttgac aaaactaaaa ctaaagcaaa ctaaaaagat attaatgcgg 2281 ctgccaaaca caactcagtc tcaacttttg cccagaagca tctgttccct ctgcctacaa 2341 ataaaaatct caatctcaat ctgaatctga atctgaagtt ataccaaaac gcaaggtttc 2401 ttcaactcct gcaagtcgcg agtgcgtttc cgtttccgct tccgtttccc cttccgtttt 2461 cgtttcggtt ttcggtttcg gtggaaagaa agctaggaag ctagaaagct aaagcggctg 2521 ctgccacctc cactgccaca gggaactggg aaacagccgc caagatgacg atgtggcaga 2581 gtggcggcat gggaggccat ggctcccaga acaatccatg gatgaagctg atgggcattg 2641 tccacaagga gcggcgccac acggagaacg tccagagtca gtccggttcc aacgagcgca 2701 acctgaacca gtctttgccc aaattgagca gtcaagacga agaagggggg gctggtcatg 2761 gctttggtgg cggaccgcaa cactttgaac ccattcctca cgatcatgat ttctgcgaaa 2821 gagtcgttat aaatgtaagc ggattaaggt ttgagacaca actacgtacg ttaaatcaat 2881 tcccggacac gctgcttggg gatccagctc ggagattacg gtactttgac ccgcttagaa 2941 atgaatattt ttttgaccgt agtcgaccga gcttcgacgc gattttatac tattatcaga 3001 gtggtggccg actacggaga ccggtcaatg tccctttaga cgtatttagt gaagaaataa 3061 aattttatga attaggtgat caagcaatta ataaattcag agaggatgaa ggctttatta 3121 aagaggaaga aagaccatta ccggataatg agaaacagag aaaagtctgg ctgctcttcg 3181 agtatccaga aagttcgcaa gccgccagag ttgtagccat aattagtgta tttgttatat 3241 tgctatcaat tgttatattt tgtctagaaa cattacccga atttaagcat tacaaggtgt 3301 tcaatacaac aacaaatggc acaaaaatcg aggaagacga ggtgcctgac atcacagatc 3361 ctttcttcct tatagaaacg ttatgtatta tttggtttac atttgaacta actgtcaggt 3421 tcctcgcatg tccgaacaaa ttaaatttct gcagggatgt catgaatgtt atcgacataa 3481 tcgccatcat tccgtacttt ataacactag cgactgtcgt tgccgaagag gaggatacgt 3541 taaatcttcc aaaagcgcca gtcagtccac aggacaagtc atcgaatcag gctatgtcct 3601 tggcaatatt acgagtgata cgattagttc gagtatttcg aatatttaag ttatctaggc 3661 attcgaaggg tttacaaata ttaggacgaa ctctgaaagc ctcaatgcgg gaattaggtt 3721 tacttatatt tttcttattt ataggcgtcg tactcttctc atcggcggtt tattttgcgg 3781 aagctggaag cgaaaattcc ttcttcaagt ccatacccga tgcattttgg tgggcggtcg 3841 ttaccatgac caccgttgga tatggtgaca tgacacccgt cggcgtttgg ggcaagattg 3901 tgggatcact gtgtgccatt gctggcgtgc tgaccatcgc actgccggtg ccggtcatcg 3961 tcagcaattt caactacttc tatcaccgcg aaacggatca ggaggagatg cagagccaga 4021 actttaatca cgttactagt tgtccatatt tgccaggtac attaggtcaa cacatgaaga 4081 aatcatcgtt gtccgagtcc tcatcggata tgatggattt ggacgatggt gtcgagtcca 4141 cgccgggatt gacagacacg catcctggac ggagtgcggt ggctccattt ttgggagccc 4201 atcagcagca gcagcagcag cagcagcaac cggtggcatc ctcaatgtcg atgtcgatcg 4261 acaagcagct gcagcatcca ctgcagcagc tgacgcagac gcaactgtac cagcagcagc 4321 agcagcagca acagcagcag aacggcttca agcagcagca acagcaacat acgcaacagc 4381 agcagcaaca gtcccacaca ataaacgcag cagcaagcgc agcagcggca acgagcggca 4441 gcggcagcag cggcctcacc atgaggcaca ataatgccct ggccgttagt atcgagaccg 4501 acgtttgact actggtgcaa aagacgttgc gtggtataaa attggccttg acaggagtta 4561 cgttggatgc cagaaacgac tacaaaagct gtttatattt aatttaagta gaacaaataa 4621 caaaacaaat ttaatctatt gctaaattaa attaaattaa atctaaacta aaacttaaat 4681 taatttaatt taattaaatt aaattataca tttaatgata aacaacacaa aaaccaaaat 4741 ccaaaccaga acaaaccaaa agcaagataa atgaatgagt aagggagtaa caataaattc 4801 gagtagtatg gcataatcca ataaaaccaa aaaacaaaaa aaaaaaccat tgacaaataa 4861 caaagatcaa caaggtgaga gataaaacag cattaacatc gaagaagtga tggcagaaat 4921 taaatcaaat ttttaacaaa cgaagctgaa tatgtcaacc tacaaacgga acggaaacag 4981 aaactgtaaa taatgcaaaa agaattcatt cggctcacaa gccattattt tagcaggaat 5041 actacagatt gctttgagaa ctccgatcga agggataagc acagtgaagc aagtccatgt 5101 ggagggatgt ccctttttta agaaccgatc aacataacct cacaaagcag atttccgata 5161 tatttacaca cagtcagtca cacacacaca gacacgcatt acaagaaagt atagaaaaac 5221 tgccgtaata tttaataact gaaaaaacca aaaaaccgaa acctacttgt atagtcatca 5281 aggaatacca ataccaaccc gaaaccgaat ccaaggcaat atctgctttt aaatgtgagg 5341 ggaattacta tcgtgtaact tagaacagct aaccatctaa ctgaataact gaactaacca 5401 actaggcata tgcatacata catacatata tgtgatagat gtactatgtg tatggaacct 5461 aaacaatatc gttcgtaact cgtaactact cgagaccctt tgttttttga ttaaagctta 5521 agagaaatct atgcccaccc aatccacttc gaacctctcc actacgaaac caactaactg 5581 aacccatatc agctatatat cttctgcttc gatccccccg aattaaaacg aaataaaaag 5641 tacaaatatt caactaaaag cgaaacaact aaatcgtaaa tactacgatg aagatgcaga 5701 ttcagtgctt gaaggattta taaaaaggaa aaggaaaaac gactgcaatt gaactacacc 5761 tacaagaccg aagaaagtac ggatccaacg gattgctcga attccccact cacagatcca 5821 aaaatcacag aatcacaaag aagagaaaaa ggtggcgaca agagatgcaa caaaacagaa 5881 aacgctctta tgattttttt taataaaagc aaactatata ccacaaacaa aaaaaattaa 5941 caaaaaaacc aacaaacact aaaggtaaaa gttaaactaa aagcgatgat ttcttcttcg 6001 actgaattgc aggggttagt cgatacccta ttcccacttc ccacccaaaa aacccccccc 6061 tcccttctcc tagcaagaaa tcgttgactg aactgaactg cgaattcaac ttttgcatta 6121 agtgtatatt aaaagagata caagatacaa aactccacta tacatatata tataatgtga 6181 agatatatat ttatgtgtgt atatgtaccg aactgcatag atgaatatat taatcgtata 6241 tgtatatgag taggagacct gtacataagg agggttgctc ttgccgatgt aaattgatgg 6301 atagcccata gttccatggc aaccgagaaa cggagaaacc gatcatattc aagtgtaaat 6361 tttaaaaagc ttcgaaaacc gtccacacac a