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LOCUS XM_070219096 5937 bp mRNA linear INV 09-DEC-2024 protein Shaker (LOC108066900), transcript variant X5, mRNA. ACCESSION XM_070219096 VERSION XM_070219096.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5937 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5937 /gene="LOC108066900" /note="potassium voltage-gated channel protein Shaker; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108066900" CDS 2108..4054 /gene="LOC108066900" /codon_start=1 /product="potassium voltage-gated channel protein Shaker isoform X3" /protein_id="XP_070075197.1" /db_xref="GeneID:108066900" /translation="MTMWQSGGMGGHGSQNNPWMKLMGIVHKERRHTENVQSQSGSNE RNLNQSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRT LNQFPDTLLGDPARRLRYFDPLRNEYFFDRSRPSFDAILYYYQSGGRLRRPVNVPLDV FSEEIKFYELGDQAINKFREDEGFIKEEERPLPDNEKQRKVWLLFEYPESSQAARVVA IISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCII WFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLATVVAEEEDTLNLPKAPVS PQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELGLLIFFLF IGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDMTPVGVWGKIVGSLC AIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQNFNHVTSCPYLPGTLVGQHMKKS SLSESSSDMMDLDDGVESTPGLTDTHPGRSAVAPFLGAHQQQQQQQQQPVASSMSMSI DKQLQHPLQQLTQTQLYQQQQQQQQQQNGFKQQQQQHTQQQQQQSHTINAAASAAAAT SGSGSSGLTMRHNNALAVSIETDV" misc_feature 2360..2740 /gene="LOC108066900" /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily; Region: BTB_POZ; cl38908" /db_xref="CDD:453885" misc_feature 2747..3535 /gene="LOC108066900" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" ORIGIN 1 cacattatag tctccagcgc ctagtcgttg ggtatacggc gcgatgtaca gagccgcgac 61 acgcgacacg caactagcag cagcagcagc agcagcacta gcagcagcaa cacttgcaac 121 agcaacagca acacttgcaa cacagcaaca gcagccggaa gaccaaacga ccactgagcc 181 gcccttttaa gtcgtgttag tagaaatcgt cgttgtcgaa atcgtcgcca aaaaaataaa 241 ataaataaaa taaatacaaa attccgctaa aaccgtcgca gcctcctacg aattcttcta 301 ttttttttac atttttttcc agtgctcgcg acgcgaaaca aaaaatcatt tgaaatctaa 361 caaaaaatct aaaaaaaaag aaaagtaata tctctttcca acttccaaac aaccagaagt 421 cctctgacca cccagcatac ctttttgagg cggaaaagga cacgaatcac acccctaata 481 cagggccaaa tgagctggaa atgtccaagt ggccgatggc gatggtgatg atggtgctat 541 cgcctttgga tgggccatcc aggaagcaaa agcaacaaga acggtggcaa ataagccaaa 601 ttaacgagat cccgaggagg catatataca acatcaacat ctcatcgttc tcatcatcag 661 ttgaggaatc cgaacaatgc cctagaaaga aagccattca aatcgcccaa gtaatcggca 721 aataatcgag aatagtcgtc gtttcgttaa gattcgtttg tttttttttt cggttacggt 781 ttcggtttcg gttcgcgagt gctaccactt ccgtttccgc tttcgtttcc gccttcgtcc 841 ttcgcgtctt gtgtgtatgt gtgtgtgcct ctgcttctct gttcctgttc ctggttctgt 901 gtctgcgtgt gaattaccag atatatctat ctatctatca atattttttt tgttgttttt 961 tctctccatc caatcccgcc ctcaaaaata aagttctaaa aacataaaaa cttaagaatc 1021 gagagatgaa atatgcgaat catgtgggat aaatgagaca actgagtgtt gcggtcgagg 1081 gcagttccag ttgcagtttc agttccccag cccgaaccat tctacactgt gcatcgtgag 1141 tgggactcga atcgcagcca ttctcgctcc gccccgccct ctgtcctccg cccccagcat 1201 tatcaaatta tcaaagccaa ctacggatat taatagttct aattctaatc gcaaataatt 1261 atcaatagca atctacgagt caataataat acaatacata ttcgaaacat aactaccagc 1321 tcagacggca cgcgggaaag caataagctc cctgtgcacg taaattctca tatcgtcgtt 1381 taatcgcctt cctgccctat gcactatatc agcaacaaca acaataacaa caacaactac 1441 acctatcact tcaacaacaa aagagtcaac caaaaagcaa tcgtaaaagc aaataactag 1501 taaaagttgt aattggaaca aatgttgtac atacctacgg atacggataa attgtaaata 1561 aattacatag gccaagaaac caaacagcaa ttcgaggaga aagcaacagc actacacgac 1621 caaaaagcaa agcaaaagca agagagaagc aaaagcaaaa gcaacattag ccgcccaaag 1681 aaacttgaaa gcattagcca aaaaactaaa actaaaaaaa aaccaaaaaa ctcttagttc 1741 aattccatcc aaaaacaaaa acccaatctc tttcggcttt gacaaaacta aaactaaagc 1801 aaactaaaaa gatattaatg cggctgccaa acacaactca gtctcaactt ttgcccagaa 1861 gcatctgttc cctctgccta caaataaaaa tctcaatctc aatctgaatc tgaatctgaa 1921 gttataccaa aacgcaaggt ttcttcaact cctgcaagtc gcgagtgcgt ttccgtttcc 1981 gcttccgttt ccccttccgt tttcgtttcg gttttcggtt tcggtggaaa gaaagctagg 2041 aagctagaaa gctaaagcgg ctgctgccac ctccactgcc acagggaact gggaaacagc 2101 cgccaagatg acgatgtggc agagtggcgg catgggaggc catggctccc agaacaatcc 2161 atggatgaag ctgatgggca ttgtccacaa ggagcggcgc cacacggaga acgtccagag 2221 tcagtccggt tccaacgagc gcaacctgaa ccagtctttg cccaaattga gcagtcaaga 2281 cgaagaaggg ggggctggtc atggctttgg tggcggaccg caacactttg aacccattcc 2341 tcacgatcat gatttctgcg aaagagtcgt tataaatgta agcggattaa ggtttgagac 2401 acaactacgt acgttaaatc aattcccgga cacgctgctt ggggatccag ctcggagatt 2461 acggtacttt gacccgctta gaaatgaata tttttttgac cgtagtcgac cgagcttcga 2521 cgcgatttta tactattatc agagtggtgg ccgactacgg agaccggtca atgtcccttt 2581 agacgtattt agtgaagaaa taaaatttta tgaattaggt gatcaagcaa ttaataaatt 2641 cagagaggat gaaggcttta ttaaagagga agaaagacca ttaccggata atgagaaaca 2701 gagaaaagtc tggctgctct tcgagtatcc agaaagttcg caagccgcca gagttgtagc 2761 cataattagt gtatttgtta tattgctatc aattgttata ttttgtctag aaacattacc 2821 cgaatttaag cattacaagg tgttcaatac aacaacaaat ggcacaaaaa tcgaggaaga 2881 cgaggtgcct gacatcacag atcctttctt ccttatagaa acgttatgta ttatttggtt 2941 tacatttgaa ctaactgtca ggttcctcgc atgtccgaac aaattaaatt tctgcaggga 3001 tgtcatgaat gttatcgaca taatcgccat cattccgtac tttataacac tagcgactgt 3061 cgttgccgaa gaggaggata cgttaaatct tccaaaagcg ccagtcagtc cacaggacaa 3121 gtcatcgaat caggctatgt ccttggcaat attacgagtg atacgattag ttcgagtatt 3181 tcgaatattt aagttatcta ggcattcgaa gggtttacaa atattaggac gaactctgaa 3241 agcctcaatg cgggaattag gtttacttat atttttctta tttataggcg tcgtactctt 3301 ctcatcggcg gtttattttg cggaagctgg aagcgaaaat tccttcttca agtccatacc 3361 cgatgcattt tggtgggcgg tcgttaccat gaccaccgtt ggatatggtg acatgacacc 3421 cgtcggcgtt tggggcaaga ttgtgggatc actgtgtgcc attgctggcg tgctgaccat 3481 cgcactgccg gtgccggtca tcgtcagcaa tttcaactac ttctatcacc gcgaaacgga 3541 tcaggaggag atgcagagcc agaactttaa tcacgttact agttgtccat atttgccagg 3601 tacattagta ggtcaacaca tgaagaaatc atcgttgtcc gagtcctcat cggatatgat 3661 ggatttggac gatggtgtcg agtccacgcc gggattgaca gacacgcatc ctggacggag 3721 tgcggtggct ccatttttgg gagcccatca gcagcagcag cagcagcagc agcaaccggt 3781 ggcatcctca atgtcgatgt cgatcgacaa gcagctgcag catccactgc agcagctgac 3841 gcagacgcaa ctgtaccagc agcagcagca gcagcaacag cagcagaacg gcttcaagca 3901 gcagcaacag caacatacgc aacagcagca gcaacagtcc cacacaataa acgcagcagc 3961 aagcgcagca gcggcaacga gcggcagcgg cagcagcggc ctcaccatga ggcacaataa 4021 tgccctggcc gttagtatcg agaccgacgt ttgactactg gtgcaaaaga cgttgcgtgg 4081 tataaaattg gccttgacag gagttacgtt ggatgccaga aacgactaca aaagctgttt 4141 atatttaatt taagtagaac aaataacaaa acaaatttaa tctattgcta aattaaatta 4201 aattaaatct aaactaaaac ttaaattaat ttaatttaat taaattaaat tatacattta 4261 atgataaaca acacaaaaac caaaatccaa accagaacaa accaaaagca agataaatga 4321 atgagtaagg gagtaacaat aaattcgagt agtatggcat aatccaataa aaccaaaaaa 4381 caaaaaaaaa aaccattgac aaataacaaa gatcaacaag gtgagagata aaacagcatt 4441 aacatcgaag aagtgatggc agaaattaaa tcaaattttt aacaaacgaa gctgaatatg 4501 tcaacctaca aacggaacgg aaacagaaac tgtaaataat gcaaaaagaa ttcattcggc 4561 tcacaagcca ttattttagc aggaatacta cagattgctt tgagaactcc gatcgaaggg 4621 ataagcacag tgaagcaagt ccatgtggag ggatgtccct tttttaagaa ccgatcaaca 4681 taacctcaca aagcagattt ccgatatatt tacacacagt cagtcacaca cacacagaca 4741 cgcattacaa gaaagtatag aaaaactgcc gtaatattta ataactgaaa aaaccaaaaa 4801 accgaaacct acttgtatag tcatcaagga ataccaatac caacccgaaa ccgaatccaa 4861 ggcaatatct gcttttaaat gtgaggggaa ttactatcgt gtaacttaga acagctaacc 4921 atctaactga ataactgaac taaccaacta ggcatatgca tacatacata catatatgtg 4981 atagatgtac tatgtgtatg gaacctaaac aatatcgttc gtaactcgta actactcgag 5041 accctttgtt ttttgattaa agcttaagag aaatctatgc ccacccaatc cacttcgaac 5101 ctctccacta cgaaaccaac taactgaacc catatcagct atatatcttc tgcttcgatc 5161 cccccgaatt aaaacgaaat aaaaagtaca aatattcaac taaaagcgaa acaactaaat 5221 cgtaaatact acgatgaaga tgcagattca gtgcttgaag gatttataaa aaggaaaagg 5281 aaaaacgact gcaattgaac tacacctaca agaccgaaga aagtacggat ccaacggatt 5341 gctcgaattc cccactcaca gatccaaaaa tcacagaatc acaaagaaga gaaaaaggtg 5401 gcgacaagag atgcaacaaa acagaaaacg ctcttatgat tttttttaat aaaagcaaac 5461 tatataccac aaacaaaaaa aattaacaaa aaaaccaaca aacactaaag gtaaaagtta 5521 aactaaaagc gatgatttct tcttcgactg aattgcaggg gttagtcgat accctattcc 5581 cacttcccac ccaaaaaacc cccccctccc ttctcctagc aagaaatcgt tgactgaact 5641 gaactgcgaa ttcaactttt gcattaagtg tatattaaaa gagatacaag atacaaaact 5701 ccactataca tatatatata atgtgaagat atatatttat gtgtgtatat gtaccgaact 5761 gcatagatga atatattaat cgtatatgta tatgagtagg agacctgtac ataaggaggg 5821 ttgctcttgc cgatgtaaat tgatggatag cccatagttc catggcaacc gagaaacgga 5881 gaaaccgatc atattcaagt gtaaatttta aaaagcttcg aaaaccgtcc acacaca