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LOCUS XM_070219095 6158 bp mRNA linear INV 09-DEC-2024 protein Shaker (LOC108066900), transcript variant X4, mRNA. ACCESSION XM_070219095 VERSION XM_070219095.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6158 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6158 /gene="LOC108066900" /note="potassium voltage-gated channel protein Shaker; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108066900" CDS 2329..4275 /gene="LOC108066900" /codon_start=1 /product="potassium voltage-gated channel protein Shaker isoform X3" /protein_id="XP_070075196.1" /db_xref="GeneID:108066900" /translation="MTMWQSGGMGGHGSQNNPWMKLMGIVHKERRHTENVQSQSGSNE RNLNQSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRT LNQFPDTLLGDPARRLRYFDPLRNEYFFDRSRPSFDAILYYYQSGGRLRRPVNVPLDV FSEEIKFYELGDQAINKFREDEGFIKEEERPLPDNEKQRKVWLLFEYPESSQAARVVA IISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCII WFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLATVVAEEEDTLNLPKAPVS PQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELGLLIFFLF IGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDMTPVGVWGKIVGSLC AIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQNFNHVTSCPYLPGTLVGQHMKKS SLSESSSDMMDLDDGVESTPGLTDTHPGRSAVAPFLGAHQQQQQQQQQPVASSMSMSI DKQLQHPLQQLTQTQLYQQQQQQQQQQNGFKQQQQQHTQQQQQQSHTINAAASAAAAT SGSGSSGLTMRHNNALAVSIETDV" misc_feature 2581..2961 /gene="LOC108066900" /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily; Region: BTB_POZ; cl38908" /db_xref="CDD:453885" misc_feature 2968..3756 /gene="LOC108066900" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" ORIGIN 1 cacattatag tctccagcgc ctagtcgttg ggtatacggc gcgatgtaca gagccgcgac 61 acgcgacacg caactagcag cagcagcagc agcagcacta gcagcagcaa cacttgcaac 121 agcaacagca acacttgcaa cacagcaaca gcagccggaa gaccaaacga ccactgagcc 181 gcccttttaa gtcgtgttag tagaaatcgt cgttgtcgaa atcgtcgcca aaaaaataaa 241 ataaataaaa taaatacaaa attccgctaa aaccgtcgca gcctcctacg aattcttcta 301 ttttttttac atttttttcc agtgctcgcg acgcgaaaca aaaaatcatt tgaaatctaa 361 caaaaaatct aaaaaaaaag aaaagtaata tctctttcca acttccaaac aaccagaagt 421 cctctgacca cccagcatac ctttttgagg cggaaaagga cacgaatcac acccctaata 481 cagggccaaa tgagctggaa atgtccaagt ggccgatggc gatggtgatg atggtgctat 541 cgcctttgga tgggccatcc aggaagcaaa agcaacaaga acggtggcaa ataagccaaa 601 ttaacgagat cccgaggagg catatataca acatcaacat ctcatcgttc tcatcatcag 661 ttgaggaatc cgaacaatgc cctagaaaga aagccattca aatcgcccaa gtaatcggca 721 aataatcgag aatagtcgtc gtttcgttaa gattcgtttg tttttttttt cggttacggt 781 ttcggtttcg gttcgcgagt gctaccactt ccgtttccgc tttcgtttcc gccttcgtcc 841 ttcgcgtctt gtgtgtatgt gtgtgtgcct ctgcttctct gttcctgttc ctggttctgt 901 gtctgcgtgt gaattaccag atatatctat ctatctatca atattttttt tgttgttttt 961 tctctccatc caatcccgcc ctcaaaaata aagttctaaa aacataaaaa cttaagaatc 1021 gagagatgaa atatgcgaat catgtgggat aaatgagaca actgagtgtt gcggtcgagg 1081 gcagttccag ttgcagtttc agttccccag cccgaaccat tctacactgt gcatcgtgag 1141 tgggactcga atcgcagcca ttctcgctcc gccccgccct ctgtcctccg cccccagcat 1201 tatcaaatta tcaaagccaa ctacggatat taatagttct aattctaatc gcaaataatt 1261 atcaatagca atctacgagt caataataat acaatacata ttcgaaacat aactaccagc 1321 tcagacggca cgcgggaaag caataagctc cctgtgcacg taaattctca tatcgtcgtt 1381 taatcgcctt cctgccctat gcactatatc agcaacaaca acaataacaa caacaactac 1441 acctatcact tcaacaacaa aagagtcaac caaaaagcaa tcgtaaaagc aaataactag 1501 taaaagttgt aattggaaca aatgttgtac atacctacgg atacggataa attgtaaata 1561 aattaacctt ttggccagca aaatttagct agaagacaaa atatacaagg agagaaattt 1621 ttgcatacta aatttaatga acctatacgg aaattacaaa aggcaaggta aaggaaagca 1681 gagacccaac aataattagc attaaaaatt ggttaacaag cggaagatcc cgaaatatcg 1741 aagagaaggg ataagttgta cgcccattgt gattattaat tttagacata ggccaagaaa 1801 ccaaacagca attcgaggag aaagcaacag cactacacga ccaaaaagca aagcaaaagc 1861 aagagagaag caaaagcaaa agcaacatta gccgcccaaa gaaacttgaa agcattagcc 1921 aaaaaactaa aactaaaaaa aaaccaaaaa actcttagtt caattccatc caaaaacaaa 1981 aacccaatct ctttcggctt tgacaaaact aaaactaaag caaactaaaa agatattaat 2041 gcggctgcca aacacaactc agtctcaact tttgcccaga agcatctgtt ccctctgcct 2101 acaaataaaa atctcaatct caatctgaat ctgaatctga agttatacca aaacgcaagg 2161 tttcttcaac tcctgcaagt cgcgagtgcg tttccgtttc cgcttccgtt tccccttccg 2221 ttttcgtttc ggttttcggt ttcggtggaa agaaagctag gaagctagaa agctaaagcg 2281 gctgctgcca cctccactgc cacagggaac tgggaaacag ccgccaagat gacgatgtgg 2341 cagagtggcg gcatgggagg ccatggctcc cagaacaatc catggatgaa gctgatgggc 2401 attgtccaca aggagcggcg ccacacggag aacgtccaga gtcagtccgg ttccaacgag 2461 cgcaacctga accagtcttt gcccaaattg agcagtcaag acgaagaagg gggggctggt 2521 catggctttg gtggcggacc gcaacacttt gaacccattc ctcacgatca tgatttctgc 2581 gaaagagtcg ttataaatgt aagcggatta aggtttgaga cacaactacg tacgttaaat 2641 caattcccgg acacgctgct tggggatcca gctcggagat tacggtactt tgacccgctt 2701 agaaatgaat atttttttga ccgtagtcga ccgagcttcg acgcgatttt atactattat 2761 cagagtggtg gccgactacg gagaccggtc aatgtccctt tagacgtatt tagtgaagaa 2821 ataaaatttt atgaattagg tgatcaagca attaataaat tcagagagga tgaaggcttt 2881 attaaagagg aagaaagacc attaccggat aatgagaaac agagaaaagt ctggctgctc 2941 ttcgagtatc cagaaagttc gcaagccgcc agagttgtag ccataattag tgtatttgtt 3001 atattgctat caattgttat attttgtcta gaaacattac ccgaatttaa gcattacaag 3061 gtgttcaata caacaacaaa tggcacaaaa atcgaggaag acgaggtgcc tgacatcaca 3121 gatcctttct tccttataga aacgttatgt attatttggt ttacatttga actaactgtc 3181 aggttcctcg catgtccgaa caaattaaat ttctgcaggg atgtcatgaa tgttatcgac 3241 ataatcgcca tcattccgta ctttataaca ctagcgactg tcgttgccga agaggaggat 3301 acgttaaatc ttccaaaagc gccagtcagt ccacaggaca agtcatcgaa tcaggctatg 3361 tccttggcaa tattacgagt gatacgatta gttcgagtat ttcgaatatt taagttatct 3421 aggcattcga agggtttaca aatattagga cgaactctga aagcctcaat gcgggaatta 3481 ggtttactta tatttttctt atttataggc gtcgtactct tctcatcggc ggtttatttt 3541 gcggaagctg gaagcgaaaa ttccttcttc aagtccatac ccgatgcatt ttggtgggcg 3601 gtcgttacca tgaccaccgt tggatatggt gacatgacac ccgtcggcgt ttggggcaag 3661 attgtgggat cactgtgtgc cattgctggc gtgctgacca tcgcactgcc ggtgccggtc 3721 atcgtcagca atttcaacta cttctatcac cgcgaaacgg atcaggagga gatgcagagc 3781 cagaacttta atcacgttac tagttgtcca tatttgccag gtacattagt aggtcaacac 3841 atgaagaaat catcgttgtc cgagtcctca tcggatatga tggatttgga cgatggtgtc 3901 gagtccacgc cgggattgac agacacgcat cctggacgga gtgcggtggc tccatttttg 3961 ggagcccatc agcagcagca gcagcagcag cagcaaccgg tggcatcctc aatgtcgatg 4021 tcgatcgaca agcagctgca gcatccactg cagcagctga cgcagacgca actgtaccag 4081 cagcagcagc agcagcaaca gcagcagaac ggcttcaagc agcagcaaca gcaacatacg 4141 caacagcagc agcaacagtc ccacacaata aacgcagcag caagcgcagc agcggcaacg 4201 agcggcagcg gcagcagcgg cctcaccatg aggcacaata atgccctggc cgttagtatc 4261 gagaccgacg tttgactact ggtgcaaaag acgttgcgtg gtataaaatt ggccttgaca 4321 ggagttacgt tggatgccag aaacgactac aaaagctgtt tatatttaat ttaagtagaa 4381 caaataacaa aacaaattta atctattgct aaattaaatt aaattaaatc taaactaaaa 4441 cttaaattaa tttaatttaa ttaaattaaa ttatacattt aatgataaac aacacaaaaa 4501 ccaaaatcca aaccagaaca aaccaaaagc aagataaatg aatgagtaag ggagtaacaa 4561 taaattcgag tagtatggca taatccaata aaaccaaaaa acaaaaaaaa aaaccattga 4621 caaataacaa agatcaacaa ggtgagagat aaaacagcat taacatcgaa gaagtgatgg 4681 cagaaattaa atcaaatttt taacaaacga agctgaatat gtcaacctac aaacggaacg 4741 gaaacagaaa ctgtaaataa tgcaaaaaga attcattcgg ctcacaagcc attattttag 4801 caggaatact acagattgct ttgagaactc cgatcgaagg gataagcaca gtgaagcaag 4861 tccatgtgga gggatgtccc ttttttaaga accgatcaac ataacctcac aaagcagatt 4921 tccgatatat ttacacacag tcagtcacac acacacagac acgcattaca agaaagtata 4981 gaaaaactgc cgtaatattt aataactgaa aaaaccaaaa aaccgaaacc tacttgtata 5041 gtcatcaagg aataccaata ccaacccgaa accgaatcca aggcaatatc tgcttttaaa 5101 tgtgagggga attactatcg tgtaacttag aacagctaac catctaactg aataactgaa 5161 ctaaccaact aggcatatgc atacatacat acatatatgt gatagatgta ctatgtgtat 5221 ggaacctaaa caatatcgtt cgtaactcgt aactactcga gaccctttgt tttttgatta 5281 aagcttaaga gaaatctatg cccacccaat ccacttcgaa cctctccact acgaaaccaa 5341 ctaactgaac ccatatcagc tatatatctt ctgcttcgat ccccccgaat taaaacgaaa 5401 taaaaagtac aaatattcaa ctaaaagcga aacaactaaa tcgtaaatac tacgatgaag 5461 atgcagattc agtgcttgaa ggatttataa aaaggaaaag gaaaaacgac tgcaattgaa 5521 ctacacctac aagaccgaag aaagtacgga tccaacggat tgctcgaatt ccccactcac 5581 agatccaaaa atcacagaat cacaaagaag agaaaaaggt ggcgacaaga gatgcaacaa 5641 aacagaaaac gctcttatga ttttttttaa taaaagcaaa ctatatacca caaacaaaaa 5701 aaattaacaa aaaaaccaac aaacactaaa ggtaaaagtt aaactaaaag cgatgatttc 5761 ttcttcgact gaattgcagg ggttagtcga taccctattc ccacttccca cccaaaaaac 5821 ccccccctcc cttctcctag caagaaatcg ttgactgaac tgaactgcga attcaacttt 5881 tgcattaagt gtatattaaa agagatacaa gatacaaaac tccactatac atatatatat 5941 aatgtgaaga tatatattta tgtgtgtata tgtaccgaac tgcatagatg aatatattaa 6001 tcgtatatgt atatgagtag gagacctgta cataaggagg gttgctcttg ccgatgtaaa 6061 ttgatggata gcccatagtt ccatggcaac cgagaaacgg agaaaccgat catattcaag 6121 tgtaaatttt aaaaagcttc gaaaaccgtc cacacaca