Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070219094 6147 bp mRNA linear INV 09-DEC-2024 protein Shaker (LOC108066900), transcript variant X3, mRNA. ACCESSION XM_070219094 VERSION XM_070219094.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6147 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6147 /gene="LOC108066900" /note="potassium voltage-gated channel protein Shaker; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108066900" CDS 2318..4264 /gene="LOC108066900" /codon_start=1 /product="potassium voltage-gated channel protein Shaker isoform X3" /protein_id="XP_070075195.1" /db_xref="GeneID:108066900" /translation="MTMWQSGGMGGHGSQNNPWMKLMGIVHKERRHTENVQSQSGSNE RNLNQSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRT LNQFPDTLLGDPARRLRYFDPLRNEYFFDRSRPSFDAILYYYQSGGRLRRPVNVPLDV FSEEIKFYELGDQAINKFREDEGFIKEEERPLPDNEKQRKVWLLFEYPESSQAARVVA IISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCII WFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLATVVAEEEDTLNLPKAPVS PQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELGLLIFFLF IGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDMTPVGVWGKIVGSLC AIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQNFNHVTSCPYLPGTLVGQHMKKS SLSESSSDMMDLDDGVESTPGLTDTHPGRSAVAPFLGAHQQQQQQQQQPVASSMSMSI DKQLQHPLQQLTQTQLYQQQQQQQQQQNGFKQQQQQHTQQQQQQSHTINAAASAAAAT SGSGSSGLTMRHNNALAVSIETDV" misc_feature 2570..2950 /gene="LOC108066900" /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily; Region: BTB_POZ; cl38908" /db_xref="CDD:453885" misc_feature 2957..3745 /gene="LOC108066900" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" ORIGIN 1 cacattatag tctccagcgc ctagtcgttg ggtatacggc gcgatgtaca gagccgcgac 61 acgcgacacg caactagcag cagcagcagc agcagcacta gcagcagcaa cacttgcaac 121 agcaacagca acacttgcaa cacagcaaca gcagccggaa gaccaaacga ccactgagcc 181 gcccttttaa gtcgtgttag tagaaatcgt cgttgtcgaa atcgtcgcca aaaaaataaa 241 ataaataaaa taaatacaaa attccgctaa aaccgtcgca gcctcctacg aattcttcta 301 ttttttttac atttttttcc agtgctcgcg acgcgaaaca aaaaatcatt tgaaatctaa 361 caaaaaatct aaaaaaaaag aaaagtaata tctctttcca acttccaaac aaccagaagt 421 cctctgacca cccagcatac ctttttgagg cggaaaagga cacgaatcac acccctaata 481 cagggccaaa tgagctggaa atgtccaagt ggccgatggc gatggtgatg atggtgctat 541 cgcctttgga tgggccatcc aggaagcaaa agcaacaaga acggtggcaa ataagccaaa 601 ttaacgagat cccgaggagg catatataca acatcaacat ctcatcgttc tcatcatcag 661 ttgaggaatc cgaacaatgc cctagaaaga aagccattca aatcgcccaa gtaatcggca 721 aataatcgag aatagtcgtc gtttcgttaa gattcgtttg tttttttttt cggttacggt 781 ttcggtttcg gttcgcgagt gctaccactt ccgtttccgc tttcgtttcc gccttcgtcc 841 ttcgcgtctt gtgtgtatgt gtgtgtgcct ctgcttctct gttcctgttc ctggttctgt 901 gtctgcgtgt gaattaccag atatatctat ctatctatca atattttttt tgttgttttt 961 tctctccatc caatcccgcc ctcaaaaata aagttctaaa aacataaaaa cttaagaatc 1021 gagagatgaa atatgcgaat catgtgggat aaatgagaca actgagtgtt gcggtcgagg 1081 gcagttccag ttgcagtttc agttccccag cccgaaccat tctacactgt gcatcgtgag 1141 tgggactcga atcgcagcca ttctcgctcc gccccgccct ctgtcctccg cccccagcat 1201 tatcaaatta tcaaagccaa ctacggatat taatagttct aattctaatc gcaaataatt 1261 atcaatagca atctacgagt caataataat acaatacata ttcgaaacat aactaccagc 1321 tcagacggca cgcgggaaag caataagctc cctgtgcacg taaattctca tatcgtcgtt 1381 taatcgcctt cctgccctat gcactatatc agcaacaaca acaataacaa caacaactac 1441 acctatcact tcaacaacaa aagagtcaac caaaaagcaa tcgtaaaagc aaataactag 1501 taaaagttgt aattggaaca aatgttgtac atacctacgg atacggataa attaaccttt 1561 tggccagcaa aatttagcta gaagacaaaa tatacaagga gagaaatttt tgcatactaa 1621 atttaatgaa cctatacgga aattacaaaa ggcaaggtaa aggaaagcag agacccaaca 1681 ataattagca ttaaaaattg gttaacaagc ggaagatccc gaaatatcga agagaaggga 1741 taagttgtac gcccattgtg attattaatt ttagacatag gccaagaaac caaacagcaa 1801 ttcgaggaga aagcaacagc actacacgac caaaaagcaa agcaaaagca agagagaagc 1861 aaaagcaaaa gcaacattag ccgcccaaag aaacttgaaa gcattagcca aaaaactaaa 1921 actaaaaaaa aaccaaaaaa ctcttagttc aattccatcc aaaaacaaaa acccaatctc 1981 tttcggcttt gacaaaacta aaactaaagc aaactaaaaa gatattaatg cggctgccaa 2041 acacaactca gtctcaactt ttgcccagaa gcatctgttc cctctgccta caaataaaaa 2101 tctcaatctc aatctgaatc tgaatctgaa gttataccaa aacgcaaggt ttcttcaact 2161 cctgcaagtc gcgagtgcgt ttccgtttcc gcttccgttt ccccttccgt tttcgtttcg 2221 gttttcggtt tcggtggaaa gaaagctagg aagctagaaa gctaaagcgg ctgctgccac 2281 ctccactgcc acagggaact gggaaacagc cgccaagatg acgatgtggc agagtggcgg 2341 catgggaggc catggctccc agaacaatcc atggatgaag ctgatgggca ttgtccacaa 2401 ggagcggcgc cacacggaga acgtccagag tcagtccggt tccaacgagc gcaacctgaa 2461 ccagtctttg cccaaattga gcagtcaaga cgaagaaggg ggggctggtc atggctttgg 2521 tggcggaccg caacactttg aacccattcc tcacgatcat gatttctgcg aaagagtcgt 2581 tataaatgta agcggattaa ggtttgagac acaactacgt acgttaaatc aattcccgga 2641 cacgctgctt ggggatccag ctcggagatt acggtacttt gacccgctta gaaatgaata 2701 tttttttgac cgtagtcgac cgagcttcga cgcgatttta tactattatc agagtggtgg 2761 ccgactacgg agaccggtca atgtcccttt agacgtattt agtgaagaaa taaaatttta 2821 tgaattaggt gatcaagcaa ttaataaatt cagagaggat gaaggcttta ttaaagagga 2881 agaaagacca ttaccggata atgagaaaca gagaaaagtc tggctgctct tcgagtatcc 2941 agaaagttcg caagccgcca gagttgtagc cataattagt gtatttgtta tattgctatc 3001 aattgttata ttttgtctag aaacattacc cgaatttaag cattacaagg tgttcaatac 3061 aacaacaaat ggcacaaaaa tcgaggaaga cgaggtgcct gacatcacag atcctttctt 3121 ccttatagaa acgttatgta ttatttggtt tacatttgaa ctaactgtca ggttcctcgc 3181 atgtccgaac aaattaaatt tctgcaggga tgtcatgaat gttatcgaca taatcgccat 3241 cattccgtac tttataacac tagcgactgt cgttgccgaa gaggaggata cgttaaatct 3301 tccaaaagcg ccagtcagtc cacaggacaa gtcatcgaat caggctatgt ccttggcaat 3361 attacgagtg atacgattag ttcgagtatt tcgaatattt aagttatcta ggcattcgaa 3421 gggtttacaa atattaggac gaactctgaa agcctcaatg cgggaattag gtttacttat 3481 atttttctta tttataggcg tcgtactctt ctcatcggcg gtttattttg cggaagctgg 3541 aagcgaaaat tccttcttca agtccatacc cgatgcattt tggtgggcgg tcgttaccat 3601 gaccaccgtt ggatatggtg acatgacacc cgtcggcgtt tggggcaaga ttgtgggatc 3661 actgtgtgcc attgctggcg tgctgaccat cgcactgccg gtgccggtca tcgtcagcaa 3721 tttcaactac ttctatcacc gcgaaacgga tcaggaggag atgcagagcc agaactttaa 3781 tcacgttact agttgtccat atttgccagg tacattagta ggtcaacaca tgaagaaatc 3841 atcgttgtcc gagtcctcat cggatatgat ggatttggac gatggtgtcg agtccacgcc 3901 gggattgaca gacacgcatc ctggacggag tgcggtggct ccatttttgg gagcccatca 3961 gcagcagcag cagcagcagc agcaaccggt ggcatcctca atgtcgatgt cgatcgacaa 4021 gcagctgcag catccactgc agcagctgac gcagacgcaa ctgtaccagc agcagcagca 4081 gcagcaacag cagcagaacg gcttcaagca gcagcaacag caacatacgc aacagcagca 4141 gcaacagtcc cacacaataa acgcagcagc aagcgcagca gcggcaacga gcggcagcgg 4201 cagcagcggc ctcaccatga ggcacaataa tgccctggcc gttagtatcg agaccgacgt 4261 ttgactactg gtgcaaaaga cgttgcgtgg tataaaattg gccttgacag gagttacgtt 4321 ggatgccaga aacgactaca aaagctgttt atatttaatt taagtagaac aaataacaaa 4381 acaaatttaa tctattgcta aattaaatta aattaaatct aaactaaaac ttaaattaat 4441 ttaatttaat taaattaaat tatacattta atgataaaca acacaaaaac caaaatccaa 4501 accagaacaa accaaaagca agataaatga atgagtaagg gagtaacaat aaattcgagt 4561 agtatggcat aatccaataa aaccaaaaaa caaaaaaaaa aaccattgac aaataacaaa 4621 gatcaacaag gtgagagata aaacagcatt aacatcgaag aagtgatggc agaaattaaa 4681 tcaaattttt aacaaacgaa gctgaatatg tcaacctaca aacggaacgg aaacagaaac 4741 tgtaaataat gcaaaaagaa ttcattcggc tcacaagcca ttattttagc aggaatacta 4801 cagattgctt tgagaactcc gatcgaaggg ataagcacag tgaagcaagt ccatgtggag 4861 ggatgtccct tttttaagaa ccgatcaaca taacctcaca aagcagattt ccgatatatt 4921 tacacacagt cagtcacaca cacacagaca cgcattacaa gaaagtatag aaaaactgcc 4981 gtaatattta ataactgaaa aaaccaaaaa accgaaacct acttgtatag tcatcaagga 5041 ataccaatac caacccgaaa ccgaatccaa ggcaatatct gcttttaaat gtgaggggaa 5101 ttactatcgt gtaacttaga acagctaacc atctaactga ataactgaac taaccaacta 5161 ggcatatgca tacatacata catatatgtg atagatgtac tatgtgtatg gaacctaaac 5221 aatatcgttc gtaactcgta actactcgag accctttgtt ttttgattaa agcttaagag 5281 aaatctatgc ccacccaatc cacttcgaac ctctccacta cgaaaccaac taactgaacc 5341 catatcagct atatatcttc tgcttcgatc cccccgaatt aaaacgaaat aaaaagtaca 5401 aatattcaac taaaagcgaa acaactaaat cgtaaatact acgatgaaga tgcagattca 5461 gtgcttgaag gatttataaa aaggaaaagg aaaaacgact gcaattgaac tacacctaca 5521 agaccgaaga aagtacggat ccaacggatt gctcgaattc cccactcaca gatccaaaaa 5581 tcacagaatc acaaagaaga gaaaaaggtg gcgacaagag atgcaacaaa acagaaaacg 5641 ctcttatgat tttttttaat aaaagcaaac tatataccac aaacaaaaaa aattaacaaa 5701 aaaaccaaca aacactaaag gtaaaagtta aactaaaagc gatgatttct tcttcgactg 5761 aattgcaggg gttagtcgat accctattcc cacttcccac ccaaaaaacc cccccctccc 5821 ttctcctagc aagaaatcgt tgactgaact gaactgcgaa ttcaactttt gcattaagtg 5881 tatattaaaa gagatacaag atacaaaact ccactataca tatatatata atgtgaagat 5941 atatatttat gtgtgtatat gtaccgaact gcatagatga atatattaat cgtatatgta 6001 tatgagtagg agacctgtac ataaggaggg ttgctcttgc cgatgtaaat tgatggatag 6061 cccatagttc catggcaacc gagaaacgga gaaaccgatc atattcaagt gtaaatttta 6121 aaaagcttcg aaaaccgtcc acacaca