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LOCUS XM_070219093 3863 bp mRNA linear INV 09-DEC-2024 protein Shaker (LOC108066900), transcript variant X2, mRNA. ACCESSION XM_070219093 VERSION XM_070219093.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3863 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3863 /gene="LOC108066900" /note="potassium voltage-gated channel protein Shaker; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108066900" CDS 1..1980 /gene="LOC108066900" /codon_start=1 /product="potassium voltage-gated channel protein Shaker isoform X2" /protein_id="XP_070075194.1" /db_xref="GeneID:108066900" /translation="MAAVAGLYGLGEDRQHRKKQQQQQQHQKEQLEQKEEQKKIAERK LQLREQQLQRNSLDGYGSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVIN VSGLRFETQLRTLNQFPDTLLGDPARRLRYFDPLRNEYFFDRSRPSFDAILYYYQSGG RLRRPVNVPLDVFSEEIKFYELGDQAINKFREDEGFIKEEERPLPDNEKQRKVWLLFE YPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDIT DPFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLATVVAEE EDTLNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKAS MRELGLLIFFLFIGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDMTP VGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQNFNHVTSCPYL PGTLGQHMKKSSLSESSSDMMDLDDGVESTPGLTDTHPGRSAVAPFLGAHQQQQQQQQ QPVASSMSMSIDKQLQHPLQQLTQTQLYQQQQQQQQQQNGFKQQQQQHTQQQQQQSHT INAAASAAAATSGSGSSGLTMRHNNALAVSIETDV" misc_feature 289..669 /gene="LOC108066900" /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily; Region: BTB_POZ; cl38908" /db_xref="CDD:453885" misc_feature 676..1464 /gene="LOC108066900" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" ORIGIN 1 atggccgccg tcgccggcct ctacggcctt ggggaggatc gtcagcaccg caagaagcag 61 cagcagcagc agcagcacca gaaggagcag ctcgagcaga aggaggagca gaagaagatc 121 gccgagcgga agctgcagct gcgcgaacag cagctgcagc gcaactccct cgacggctac 181 gggtctttgc ccaaattgag cagtcaagac gaagaagggg gggctggtca tggctttggt 241 ggcggaccgc aacactttga acccattcct cacgatcatg atttctgcga aagagtcgtt 301 ataaatgtaa gcggattaag gtttgagaca caactacgta cgttaaatca attcccggac 361 acgctgcttg gggatccagc tcggagatta cggtactttg acccgcttag aaatgaatat 421 ttttttgacc gtagtcgacc gagcttcgac gcgattttat actattatca gagtggtggc 481 cgactacgga gaccggtcaa tgtcccttta gacgtattta gtgaagaaat aaaattttat 541 gaattaggtg atcaagcaat taataaattc agagaggatg aaggctttat taaagaggaa 601 gaaagaccat taccggataa tgagaaacag agaaaagtct ggctgctctt cgagtatcca 661 gaaagttcgc aagccgccag agttgtagcc ataattagtg tatttgttat attgctatca 721 attgttatat tttgtctaga aacattaccc gaatttaagc attacaaggt gttcaataca 781 acaacaaatg gcacaaaaat cgaggaagac gaggtgcctg acatcacaga tcctttcttc 841 cttatagaaa cgttatgtat tatttggttt acatttgaac taactgtcag gttcctcgca 901 tgtccgaaca aattaaattt ctgcagggat gtcatgaatg ttatcgacat aatcgccatc 961 attccgtact ttataacact agcgactgtc gttgccgaag aggaggatac gttaaatctt 1021 ccaaaagcgc cagtcagtcc acaggacaag tcatcgaatc aggctatgtc cttggcaata 1081 ttacgagtga tacgattagt tcgagtattt cgaatattta agttatctag gcattcgaag 1141 ggtttacaaa tattaggacg aactctgaaa gcctcaatgc gggaattagg tttacttata 1201 tttttcttat ttataggcgt cgtactcttc tcatcggcgg tttattttgc ggaagctgga 1261 agcgaaaatt ccttcttcaa gtccataccc gatgcatttt ggtgggcggt cgttaccatg 1321 accaccgttg gatatggtga catgacaccc gtcggcgttt ggggcaagat tgtgggatca 1381 ctgtgtgcca ttgctggcgt gctgaccatc gcactgccgg tgccggtcat cgtcagcaat 1441 ttcaactact tctatcaccg cgaaacggat caggaggaga tgcagagcca gaactttaat 1501 cacgttacta gttgtccata tttgccaggt acattaggtc aacacatgaa gaaatcatcg 1561 ttgtccgagt cctcatcgga tatgatggat ttggacgatg gtgtcgagtc cacgccggga 1621 ttgacagaca cgcatcctgg acggagtgcg gtggctccat ttttgggagc ccatcagcag 1681 cagcagcagc agcagcagca accggtggca tcctcaatgt cgatgtcgat cgacaagcag 1741 ctgcagcatc cactgcagca gctgacgcag acgcaactgt accagcagca gcagcagcag 1801 caacagcagc agaacggctt caagcagcag caacagcaac atacgcaaca gcagcagcaa 1861 cagtcccaca caataaacgc agcagcaagc gcagcagcgg caacgagcgg cagcggcagc 1921 agcggcctca ccatgaggca caataatgcc ctggccgtta gtatcgagac cgacgtttga 1981 ctactggtgc aaaagacgtt gcgtggtata aaattggcct tgacaggagt tacgttggat 2041 gccagaaacg actacaaaag ctgtttatat ttaatttaag tagaacaaat aacaaaacaa 2101 atttaatcta ttgctaaatt aaattaaatt aaatctaaac taaaacttaa attaatttaa 2161 tttaattaaa ttaaattata catttaatga taaacaacac aaaaaccaaa atccaaacca 2221 gaacaaacca aaagcaagat aaatgaatga gtaagggagt aacaataaat tcgagtagta 2281 tggcataatc caataaaacc aaaaaacaaa aaaaaaaacc attgacaaat aacaaagatc 2341 aacaaggtga gagataaaac agcattaaca tcgaagaagt gatggcagaa attaaatcaa 2401 atttttaaca aacgaagctg aatatgtcaa cctacaaacg gaacggaaac agaaactgta 2461 aataatgcaa aaagaattca ttcggctcac aagccattat tttagcagga atactacaga 2521 ttgctttgag aactccgatc gaagggataa gcacagtgaa gcaagtccat gtggagggat 2581 gtcccttttt taagaaccga tcaacataac ctcacaaagc agatttccga tatatttaca 2641 cacagtcagt cacacacaca cagacacgca ttacaagaaa gtatagaaaa actgccgtaa 2701 tatttaataa ctgaaaaaac caaaaaaccg aaacctactt gtatagtcat caaggaatac 2761 caataccaac ccgaaaccga atccaaggca atatctgctt ttaaatgtga ggggaattac 2821 tatcgtgtaa cttagaacag ctaaccatct aactgaataa ctgaactaac caactaggca 2881 tatgcataca tacatacata tatgtgatag atgtactatg tgtatggaac ctaaacaata 2941 tcgttcgtaa ctcgtaacta ctcgagaccc tttgtttttt gattaaagct taagagaaat 3001 ctatgcccac ccaatccact tcgaacctct ccactacgaa accaactaac tgaacccata 3061 tcagctatat atcttctgct tcgatccccc cgaattaaaa cgaaataaaa agtacaaata 3121 ttcaactaaa agcgaaacaa ctaaatcgta aatactacga tgaagatgca gattcagtgc 3181 ttgaaggatt tataaaaagg aaaaggaaaa acgactgcaa ttgaactaca cctacaagac 3241 cgaagaaagt acggatccaa cggattgctc gaattcccca ctcacagatc caaaaatcac 3301 agaatcacaa agaagagaaa aaggtggcga caagagatgc aacaaaacag aaaacgctct 3361 tatgattttt tttaataaaa gcaaactata taccacaaac aaaaaaaatt aacaaaaaaa 3421 ccaacaaaca ctaaaggtaa aagttaaact aaaagcgatg atttcttctt cgactgaatt 3481 gcaggggtta gtcgataccc tattcccact tcccacccaa aaaacccccc cctcccttct 3541 cctagcaaga aatcgttgac tgaactgaac tgcgaattca acttttgcat taagtgtata 3601 ttaaaagaga tacaagatac aaaactccac tatacatata tatataatgt gaagatatat 3661 atttatgtgt gtatatgtac cgaactgcat agatgaatat attaatcgta tatgtatatg 3721 agtaggagac ctgtacataa ggagggttgc tcttgccgat gtaaattgat ggatagccca 3781 tagttccatg gcaaccgaga aacggagaaa ccgatcatat tcaagtgtaa attttaaaaa 3841 gcttcgaaaa ccgtccacac aca