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LOCUS XM_070219092 3866 bp mRNA linear INV 09-DEC-2024 protein Shaker (LOC108066900), transcript variant X1, mRNA. ACCESSION XM_070219092 VERSION XM_070219092.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3866 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3866 /gene="LOC108066900" /note="potassium voltage-gated channel protein Shaker; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108066900" CDS 1..1983 /gene="LOC108066900" /codon_start=1 /product="potassium voltage-gated channel protein Shaker isoform X1" /protein_id="XP_070075193.1" /db_xref="GeneID:108066900" /translation="MAAVAGLYGLGEDRQHRKKQQQQQQHQKEQLEQKEEQKKIAERK LQLREQQLQRNSLDGYGSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVIN VSGLRFETQLRTLNQFPDTLLGDPARRLRYFDPLRNEYFFDRSRPSFDAILYYYQSGG RLRRPVNVPLDVFSEEIKFYELGDQAINKFREDEGFIKEEERPLPDNEKQRKVWLLFE YPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDIT DPFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLATVVAEE EDTLNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKAS MRELGLLIFFLFIGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDMTP VGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQNFNHVTSCPYL PGTLVGQHMKKSSLSESSSDMMDLDDGVESTPGLTDTHPGRSAVAPFLGAHQQQQQQQ QQPVASSMSMSIDKQLQHPLQQLTQTQLYQQQQQQQQQQNGFKQQQQQHTQQQQQQSH TINAAASAAAATSGSGSSGLTMRHNNALAVSIETDV" misc_feature 289..669 /gene="LOC108066900" /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily; Region: BTB_POZ; cl38908" /db_xref="CDD:453885" misc_feature 676..1464 /gene="LOC108066900" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" ORIGIN 1 atggccgccg tcgccggcct ctacggcctt ggggaggatc gtcagcaccg caagaagcag 61 cagcagcagc agcagcacca gaaggagcag ctcgagcaga aggaggagca gaagaagatc 121 gccgagcgga agctgcagct gcgcgaacag cagctgcagc gcaactccct cgacggctac 181 gggtctttgc ccaaattgag cagtcaagac gaagaagggg gggctggtca tggctttggt 241 ggcggaccgc aacactttga acccattcct cacgatcatg atttctgcga aagagtcgtt 301 ataaatgtaa gcggattaag gtttgagaca caactacgta cgttaaatca attcccggac 361 acgctgcttg gggatccagc tcggagatta cggtactttg acccgcttag aaatgaatat 421 ttttttgacc gtagtcgacc gagcttcgac gcgattttat actattatca gagtggtggc 481 cgactacgga gaccggtcaa tgtcccttta gacgtattta gtgaagaaat aaaattttat 541 gaattaggtg atcaagcaat taataaattc agagaggatg aaggctttat taaagaggaa 601 gaaagaccat taccggataa tgagaaacag agaaaagtct ggctgctctt cgagtatcca 661 gaaagttcgc aagccgccag agttgtagcc ataattagtg tatttgttat attgctatca 721 attgttatat tttgtctaga aacattaccc gaatttaagc attacaaggt gttcaataca 781 acaacaaatg gcacaaaaat cgaggaagac gaggtgcctg acatcacaga tcctttcttc 841 cttatagaaa cgttatgtat tatttggttt acatttgaac taactgtcag gttcctcgca 901 tgtccgaaca aattaaattt ctgcagggat gtcatgaatg ttatcgacat aatcgccatc 961 attccgtact ttataacact agcgactgtc gttgccgaag aggaggatac gttaaatctt 1021 ccaaaagcgc cagtcagtcc acaggacaag tcatcgaatc aggctatgtc cttggcaata 1081 ttacgagtga tacgattagt tcgagtattt cgaatattta agttatctag gcattcgaag 1141 ggtttacaaa tattaggacg aactctgaaa gcctcaatgc gggaattagg tttacttata 1201 tttttcttat ttataggcgt cgtactcttc tcatcggcgg tttattttgc ggaagctgga 1261 agcgaaaatt ccttcttcaa gtccataccc gatgcatttt ggtgggcggt cgttaccatg 1321 accaccgttg gatatggtga catgacaccc gtcggcgttt ggggcaagat tgtgggatca 1381 ctgtgtgcca ttgctggcgt gctgaccatc gcactgccgg tgccggtcat cgtcagcaat 1441 ttcaactact tctatcaccg cgaaacggat caggaggaga tgcagagcca gaactttaat 1501 cacgttacta gttgtccata tttgccaggt acattagtag gtcaacacat gaagaaatca 1561 tcgttgtccg agtcctcatc ggatatgatg gatttggacg atggtgtcga gtccacgccg 1621 ggattgacag acacgcatcc tggacggagt gcggtggctc catttttggg agcccatcag 1681 cagcagcagc agcagcagca gcaaccggtg gcatcctcaa tgtcgatgtc gatcgacaag 1741 cagctgcagc atccactgca gcagctgacg cagacgcaac tgtaccagca gcagcagcag 1801 cagcaacagc agcagaacgg cttcaagcag cagcaacagc aacatacgca acagcagcag 1861 caacagtccc acacaataaa cgcagcagca agcgcagcag cggcaacgag cggcagcggc 1921 agcagcggcc tcaccatgag gcacaataat gccctggccg ttagtatcga gaccgacgtt 1981 tgactactgg tgcaaaagac gttgcgtggt ataaaattgg ccttgacagg agttacgttg 2041 gatgccagaa acgactacaa aagctgttta tatttaattt aagtagaaca aataacaaaa 2101 caaatttaat ctattgctaa attaaattaa attaaatcta aactaaaact taaattaatt 2161 taatttaatt aaattaaatt atacatttaa tgataaacaa cacaaaaacc aaaatccaaa 2221 ccagaacaaa ccaaaagcaa gataaatgaa tgagtaaggg agtaacaata aattcgagta 2281 gtatggcata atccaataaa accaaaaaac aaaaaaaaaa accattgaca aataacaaag 2341 atcaacaagg tgagagataa aacagcatta acatcgaaga agtgatggca gaaattaaat 2401 caaattttta acaaacgaag ctgaatatgt caacctacaa acggaacgga aacagaaact 2461 gtaaataatg caaaaagaat tcattcggct cacaagccat tattttagca ggaatactac 2521 agattgcttt gagaactccg atcgaaggga taagcacagt gaagcaagtc catgtggagg 2581 gatgtccctt ttttaagaac cgatcaacat aacctcacaa agcagatttc cgatatattt 2641 acacacagtc agtcacacac acacagacac gcattacaag aaagtataga aaaactgccg 2701 taatatttaa taactgaaaa aaccaaaaaa ccgaaaccta cttgtatagt catcaaggaa 2761 taccaatacc aacccgaaac cgaatccaag gcaatatctg cttttaaatg tgaggggaat 2821 tactatcgtg taacttagaa cagctaacca tctaactgaa taactgaact aaccaactag 2881 gcatatgcat acatacatac atatatgtga tagatgtact atgtgtatgg aacctaaaca 2941 atatcgttcg taactcgtaa ctactcgaga ccctttgttt tttgattaaa gcttaagaga 3001 aatctatgcc cacccaatcc acttcgaacc tctccactac gaaaccaact aactgaaccc 3061 atatcagcta tatatcttct gcttcgatcc ccccgaatta aaacgaaata aaaagtacaa 3121 atattcaact aaaagcgaaa caactaaatc gtaaatacta cgatgaagat gcagattcag 3181 tgcttgaagg atttataaaa aggaaaagga aaaacgactg caattgaact acacctacaa 3241 gaccgaagaa agtacggatc caacggattg ctcgaattcc ccactcacag atccaaaaat 3301 cacagaatca caaagaagag aaaaaggtgg cgacaagaga tgcaacaaaa cagaaaacgc 3361 tcttatgatt ttttttaata aaagcaaact atataccaca aacaaaaaaa attaacaaaa 3421 aaaccaacaa acactaaagg taaaagttaa actaaaagcg atgatttctt cttcgactga 3481 attgcagggg ttagtcgata ccctattccc acttcccacc caaaaaaccc ccccctccct 3541 tctcctagca agaaatcgtt gactgaactg aactgcgaat tcaacttttg cattaagtgt 3601 atattaaaag agatacaaga tacaaaactc cactatacat atatatataa tgtgaagata 3661 tatatttatg tgtgtatatg taccgaactg catagatgaa tatattaatc gtatatgtat 3721 atgagtagga gacctgtaca taaggagggt tgctcttgcc gatgtaaatt gatggatagc 3781 ccatagttcc atggcaaccg agaaacggag aaaccgatca tattcaagtg taaattttaa 3841 aaagcttcga aaaccgtcca cacaca