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PREDICTED: Drosophila takahashii swallow (swa), mRNA.


LOCUS       XM_070219086            1961 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_070219086
VERSION     XM_070219086.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1961
                     /gene="swa"
                     /note="swallow; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:108054782"
     CDS             138..1709
                     /gene="swa"
                     /codon_start=1
                     /product="protein swallow"
                     /protein_id="XP_070075187.1"
                     /db_xref="GeneID:108054782"
                     /translation="MSIQDESFPADELFDQLNNLSSLGARNTWFAEHHQPAAFERNTA
                     QFLDTCYADADEDGDADGDADVANKSAKTCVSDPAGRDQEDEDDVDGASGSQLGGGEG
                     PLGSGRGSKAVSYQDIHSAYTKRRFKHVKSKVAQYIADIQAEDEKRRSASGLGIQRHS
                     SMPEYLTPTSRREFKAEMDDSQSQNQAHSQTNNSSCSEEHLLAVIENLQEDKMRLQAR
                     NDYIQLALDKKRSEYLQMRSNFETCRSELSDCQQKLRRHQSHSLRSLNSWPPAGIAKA
                     TQTEAAESSALVTPLPRGDLTYNSSEGSIEMALLSVAAPVPRIPQNLGQTIHPQSLDF
                     SSVSTEADGSGTLAGEARGNSSSRAPARRPPAPNNSETSQPSSNDSAIEVEGNEEERP
                     SARQWIQRNQRGGIFYFDKRSNRVIEVIGISQNHRDHNQGQDTSQSQSINDSQAQLLV
                     HSMSQSQSQVQTNVHFRSKRSSASLGSRVLRLLGPCVRCRNGGDPTLNGSNATYTLDL
                     SLLPGGEFRDPRNQR"
     polyA_site      1961
                     /gene="swa"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttggccgaaa agtaacggtg cctttcccgc tccaattcga ttgtccaatt ggcatggaaa
       61 ctttgtgatt ttgtctcgtt taaaagtaat tttcttcgtt tattttcgcg tttcgtgtgt
      121 ttgaaaacgt gatagaaatg agtatccagg acgagagttt tccggcggac gagctgttcg
      181 accagctgaa caacctgagc agtctgggcg ccaggaacac gtggtttgcg gagcaccatc
      241 aacccgccgc ctttgagagg aacacggcgc agtttttgga cacctgctac gcggatgcgg
      301 atgaggatgg ggatgcggat ggggacgcgg atgtggccaa taagagcgcc aaaacgtgcg
      361 tcagcgatcc cgccggtcgc gaccaggagg acgaggatga tgtcgatggc gccagtggca
      421 gtcaattggg cggcggggag ggcccattgg gcagtgggcg tggcagcaag gcggtgtcct
      481 accaggacat ccactcggcc tacacgaagc gccgcttcaa gcacgtgaag agcaaggtgg
      541 cccagtacat agcggacatc caggcggagg acgaaaagcg acgcagtgcg tccggtctgg
      601 ggatccagcg gcacagctcc atgccggaat acctgacgcc cacatcgcgg cgggagttca
      661 aggcggagat ggatgactcc cagtcgcaga atcaggccca ttcgcagacc aacaactcca
      721 gctgcagcga ggagcacttg ctggcggtga tcgagaacct gcaggaggac aagatgcgcc
      781 tccaggcgcg caacgactac atccaactcg ccctggacaa gaagcggtcc gagtacctgc
      841 agatgcggag caacttcgag acctgtcgct cggagctaag cgactgccag cagaagctga
      901 ggcgccacca gagccactcg ctgaggtccc tgaactcctg gccgccggcg ggcatcgcca
      961 aggccaccca aacggaggcc gccgagtcca gtgccctggt cacacccctt ccgaggggcg
     1021 acctcaccta caacagcagc gagggctcca tcgagatggc cctgctcagc gtggcggccc
     1081 ccgtgcccag aatcccccag aatctcggcc agaccatcca tccgcaatcg ctggacttta
     1141 gcagtgtcag cacggaagcc gatggcagtg gaaccctagc cggcgaggct cgtggcaact
     1201 cctcgtccag ggccccggcg aggaggccac cggcgcccaa caactcggag accagccagc
     1261 cgagcagcaa cgactcggcc atcgaggtgg agggcaacga ggaggagcga ccctcggcca
     1321 ggcagtggat ccagcggaat caacgcgggg gcatcttcta cttcgacaag cgcagcaatc
     1381 gagtcatcga ggtcatcggc atcagccaga accatcggga tcacaatcag ggccaggata
     1441 cgagtcaaag tcagagcatc aacgacagcc aggcccaact gctggtccac tcgatgtcgc
     1501 agtcgcagtc gcaggtccag accaatgtcc acttcaggag caagaggagc tccgcctcgc
     1561 tgggcagccg ggtgctccgc ctcttggggc cctgtgttcg gtgcaggaat ggtggtgacc
     1621 cgaccttgaa tggcagcaat gccacgtata cgttggactt gtccctattg ccgggaggag
     1681 agttcaggga cccaaggaac cagcgatagg atcgatcccc catccattcc attttatttg
     1741 ttctttgtag gctcatatct tgttatattt tttatgtcgc gttaagttta tccatttgta
     1801 gtctcaattt ttattgccgc cgtatttatt caacccagtg tgtgcatgtt tagccaaatg
     1861 aaagagagaa agaattcgag gtattgtagg agaaatgtta aatttatttc attccgatta
     1921 tatttgcttg ttttaataat aaatttgcac atttgcagtt a