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LOCUS XM_070219080 3830 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_070219080 VERSION XM_070219080.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3830 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3830 /gene="BoYb" /note="Brother of Yb; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066912" CDS 75..3308 /gene="BoYb" /codon_start=1 /product="putative ATP-dependent RNA helicase BoYb" /protein_id="XP_070075181.1" /db_xref="GeneID:108066912" /translation="MLNLSDEKLAEIMENFDQTWSTGSSSSTSSRSSRSSGTKDYEVG DAYSRQDAIRPLVATNCSEYVVAHARCELHPVRRFGEVSLLPHILEMMRKLGLNRLLR LQSYTWPHLAGGAGHGAMIVGAPGSGRTFAYVPVVCHAVCKALAEIRSLPGDWPPNQY GPRALILVPDLRRVRQVSAMCHALLRKAHKEDWLTLTLNVPSTRSSEFFQRLLNGVGC LVVTPTQLNWFYHEAPGLMRFPCLQFVVYDDVDLMSQEQLANAEQVLAEILPLSHSPQ RVMVSQSYNPELMVKLKAVNDHPALIFGDILEAALYGGTRIRISLLRAAAKVNGVLQM LLECPPEANRTVIFCSDDGDMQRLVAALEDRGYNCLPYYQTSDLQVREELHRWQAAKR GGGVILLCTDDCPELIIRNAHSLIHFSMSTSWSKFKMRHLMVADNLGNTLAERKAAPL HSLVLLDDNNHRELPRLVDFLQLHQEVDPTILSLAKRIRKELAQAKCCNRSSLCSQIL RLGQCYDPCCVERHHVGKFDGPDSHLPTSGDVKLQLVQVYSPTHLCVRLLEHLPLEQP GNWQELPYPAVQEMRMQLMRHKEPPRYWPPLVGAICMYHTSFTQERVRILKVPPIKNV NIVESDLQVELQALDVDTRIFTSTCGDLYECPEALQQEPPLACDLRLLGMIPYNGERS WTEEDGRNVKYTLGQLPKEHFLQAKVQFSAAGTLFVRDLVAMVYADQFRVHLRQLSLA QHLVKATLAKRCERAAEMVKDFFGELLTKREEDELQKEEKEEQPQEKPLLSLRCQRLA QVALESGRENQLKQELKQRNCSETKEVITASNQDAQPQSKEDHLSQLYECMMNCSRLQ LEDQKESSKDGQQIEAQPVEFLKQVISGESSNKRKPKKSSVKVAPPPDHFQEQIEIPS QQPPNVVRPSVSYYQTISTLELQVSLPEDDYEYRVQLIQAQIIFRATSKSSQLIQQFL LTLRFPYTSLRHHIRGRTVYISVTKALAVADPLAFSEYRFLKPNHDMFGKMEQHRRMT QSRLLRSLEDYGYVKPKIEVQERSEESEDDERNLEGIERVDNNEICD" misc_feature 354..917 /gene="BoYb" /note="N-terminal helicase domain of the DEAD-box helicase superfamily; Region: DEAD-like_helicase_N; cl28899" /db_xref="CDD:475120" misc_feature order(447..467,816..818) /gene="BoYb" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:350670" misc_feature 1719..2123 /gene="BoYb" /note="Tudor domain superfamily; Region: Tudor_SF; cl02573" /db_xref="CDD:470623" misc_feature order(1881..1883,1887..1889,1983..1985,1995..1997, 2001..2003) /gene="BoYb" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:410449" ORIGIN 1 gatatcgata gcaggcctcc agcttccagg ctgattttct agaacgaatc ttttacccat 61 tttccagttc aaaaatgctg aacctcagcg acgaaaagct ggcggagatt atggagaact 121 tcgatcagac ctggagcacc ggctccagct cctccacgtc gagcaggagc agcaggagca 181 gcggcacgaa ggactacgag gtgggcgacg cgtacagcag gcaggacgcc atccggccac 241 tggtggccac caactgctcc gaatatgtgg tggcccacgc caggtgcgaa ctgcatccgg 301 ttcgccggtt cggggaggtc tccctgctcc ctcacatcct ggagatgatg cggaagctgg 361 gcctcaaccg gctgctccgc ctgcagagct acacgtggcc ccatttggcc ggaggagctg 421 gccatggagc catgattgtg ggtgctcctg gcagtggacg cactttcgcc tacgtgccag 481 ttgtttgcca tgccgtttgc aaggcgctgg ccgagattag gagcctgccg ggggattggc 541 cacccaatca gtacggtcct agggctctca tcctggtgcc cgatcttcgg cgcgtccgcc 601 aggtgagcgc catgtgccac gccctgctgc gcaaggcgca caaggaggat tggctgacgc 661 tgaccctgaa tgttccctcc accaggagct cggagttctt tcagcggctg ctcaacggcg 721 tcggctgcct ggtggttact ccaacccagc tgaattggtt ctaccatgaa gctcctggcc 781 tcatgcgctt cccctgcctg cagtttgtgg tctacgacga cgtggatttg atgtcccagg 841 agcagttggc caatgccgag caggttctcg ccgagattct gccgctcagc cactcgccgc 901 agcgggtgat ggtctcccag tcgtataatc ccgagcttat ggttaagcta aaggcggtca 961 atgatcaccc ggctctaatt tttggtgata tactggaggc cgctctgtac ggcggcactc 1021 gcataaggat ctcgctgctc cgcgcggccg ccaaggtgaa tggagtgctg caaatgctgc 1081 tggagtgtcc gccggaggcc aaccgcacgg tgatcttctg cagcgacgat ggggacatgc 1141 agcgcctggt ggcagctctc gaggatcggg gctacaactg cctgccctac tatcagacgt 1201 cagatctcca ggttcgcgag gagctgcatc gctggcaggc cgccaaaagg ggaggcggtg 1261 taatcctcct ctgcacggac gactgcccgg agctgatcat ccggaatgcg catagcttga 1321 tccactttag catgagcacg tcgtggagca agttcaagat gcgtcacctc atggtggctg 1381 ataatctggg aaatactttg gcggaaagga aggctgctcc tctgcattct ttagtactcc 1441 tcgacgacaa caaccaccgg gagctgccgc gtctggtgga cttcctgcag ctgcaccagg 1501 aggtggatcc caccatcctt tccctggcca agcggatacg caaggagctg gcccaggcca 1561 agtgctgcaa tcggagcagc ctgtgcagcc agattttaag gctgggccag tgctacgatc 1621 cctgctgcgt ggaacgccat catgtgggta agttcgatgg accagatagt catctgccca 1681 ccagcggaga tgtaaagctt caactggtgc aggtctactc gcccacgcac ctttgcgtcc 1741 gcctgctgga acatttgccg ctggagcagc cgggcaactg gcaggagctg ccctatccgg 1801 cggtgcagga gatgcgcatg cagctgatgc ggcacaagga gccgccacgc tactggccac 1861 ctctagtggg cgccatctgc atgtaccaca cgtcgtttac tcaggaaagg gttcggattc 1921 tcaaggtgcc gcccataaag aacgtgaata ttgtggaatc cgatttgcaa gtggaattac 1981 aagccctcga tgtcgacacg cgaatcttta cgagcacttg cggagatctg tacgaatgcc 2041 cggaggcact gcagcaggag ccaccgctgg cctgcgatct gcggttgctt gggatgattc 2101 cttacaacgg cgaacgcagc tggacggagg aggatggcag gaatgtcaaa tatacactcg 2161 gtcaactgcc caaggaacac ttcctgcagg ccaaagtgca gttctccgcc gccggcactc 2221 tgttcgtacg ggatttggtg gccatggtgt atgcggatca gttcagggtg catctaaggc 2281 agctcagcct ggcgcagcat ctggttaaag ccacgctggc caagagatgt gagcgggctg 2341 cggaaatggt taaggatttt ttcggggaac tcttaaccaa aagagaggag gatgagttgc 2401 aaaaggagga gaaggaggag cagccccagg agaagcccct cttgagcctc aggtgtcaac 2461 gcttggcaca ggtggctctg gagtcgggaa gggagaacca gctaaagcag gagctaaagc 2521 aaagaaactg cagcgagacc aaagaagtaa tcacagccag taatcaggat gcacagcctc 2581 agtccaaaga agaccacctt tcccagctgt acgagtgcat gatgaactgc agccgcttgc 2641 agctggagga tcagaaggag tcctcaaagg atggccaaca aatagaagcc cagccagtgg 2701 agtttctcaa gcaagtgata agcggtgaga gcagcaataa acgcaaacca aagaaaagca 2761 gcgtaaaggt tgccccacca cctgaccatt tccaggagca gattgagata ccctcccaac 2821 agccaccgaa cgtggtgcga ccctcggtga gctactacca gaccattagc accttggaac 2881 tgcaggtgtc cctgccggaa gatgactacg agtaccgggt tcaactgatc caagcacaga 2941 taatcttcag agccacctcg aaaagctcac aactgattca gcaattcctg ctcaccctga 3001 gattcccgta cacctcactg cgtcaccaca tccgcggacg caccgtttac atcagcgtga 3061 ccaaggcgct ggccgtcgca gatccactgg cattcagcga gtaccgattc ctcaaaccca 3121 atcacgatat gttcggcaag atggagcaac atagaaggat gacgcagagc cggctgctcc 3181 gttctctgga ggattacggc tatgtaaagc caaagatcga ggtgcaggaa agaagcgagg 3241 agagcgaaga cgatgagcgc aatctggagg ggattgagcg agtggataac aatgaaatat 3301 gtgactaaat gaaacaaact ccaaactact tagatagtta tttaaattcc agagaaattt 3361 cttttaacga agtgttattt ttcagcattt ttaattacat tttaaaatgt atacaaaagt 3421 atactcaatc tttgaaaaac tctgtttaaa atattcaata ttttcagaca ctaaatggaa 3481 caatctcagt aaaattttgt atgaaaagaa gaaaaaagcg gctaaaattt taattttaag 3541 ctattttcaa aaaatcataa aaaatacaag gaaaaatatt tagaaatttt tcttttgcag 3601 gaaaaaaagt ttaaattttg aacttcacaa taaattgtct aattttgtaa cttttcaaag 3661 ggttaagaac attgttgtgt cattaaaact gaattgaagt gctctttcta aggtgccaaa 3721 atgtttctat tataagttca aaatatgagt agatttaact ttaagttctg tcaaaataat 3781 tatgccgatc agtgtatata ccgattaaaa caggtaacgc cccaaaagag