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PREDICTED: Drosophila takahashii protein nipsnap (Nipsnap),


LOCUS       XM_070219076            1327 bp    mRNA    linear   INV 09-DEC-2024
            transcript variant X2, mRNA.
ACCESSION   XM_070219076
VERSION     XM_070219076.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1327
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1327
                     /gene="Nipsnap"
                     /note="protein nipsnap; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 Proteins"
                     /db_xref="GeneID:108058461"
     CDS             175..1005
                     /gene="Nipsnap"
                     /codon_start=1
                     /product="protein NipSnap"
                     /protein_id="XP_070075177.1"
                     /db_xref="GeneID:108058461"
                     /translation="MLKLRNLLAVVGKSNNNNNAVRALSTTASVNDSESWFSKLLVRK
                     IEPTKESHSRMLSDKEIIYALHTHNVRPDSMGNYLNNYKNTVALINEKKANLSTELVA
                     SWTVQVGDMDQCLHLWKYTGGFEKIDQAKEDLWNDPEYLSLMQERSKFLRSRHLQYLL
                     AFSYWPQIASRTGKNIYEMRSYRLTPGTMIEWGNNWARAINYRKHNNEAFAGFFSQIG
                     RLYNVHHIWCYKSLQDRKETREASWRTPGWDECVAYTVPLIREMHCRVLAPTEFSPSQ
                     "
     misc_feature    703..996
                     /gene="Nipsnap"
                     /note="Region: NIPSNAP; pfam07978"
                     /db_xref="CDD:429767"
     polyA_site      1327
                     /gene="Nipsnap"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caccccccac taccggtttt caagtctgtt tttccatctg tttcgggtcg ttttggctaa
       61 ataactaatt tttctatatt ttgttttctt ttaacgttta acatttgatt taaatattat
      121 tttagttttt aacaaaccga accggcagat taaataatcc tacataaatc gaaaatgttg
      181 aagctacgta acctattggc cgtcgtcggc aaaagcaaca acaacaacaa cgctgtccgc
      241 gccctatcca ccactgcaag cgtcaacgat tcggaatcat ggttctcaaa gttgctcgtt
      301 cggaaaatag agccaaccaa ggagtcgcac agtcgtatgc tcagcgataa ggagatcata
      361 tatgccctac atacgcacaa tgtcaggccc gattccatgg gcaactattt aaacaactac
      421 aaaaatactg tggcattgat aaacgaaaag aaggcgaatc tttcgaccga gttggtggca
      481 tcatggaccg ttcaggtggg cgacatggat cagtgcctgc acctctggaa gtacacggga
      541 ggatttgaga aaatcgacca ggccaaggag gacctttgga acgacccgga gtatctaagc
      601 ttgatgcaag aacgctccaa gttcctgcga tcccgtcatc tgcaatatct cttggccttc
      661 agctactggc cgcagattgc cagtcgtacc ggcaagaaca tttacgaaat gcgctcatac
      721 cgactgaccc ctggcaccat gatcgagtgg ggcaacaact gggcccgtgc catcaactat
      781 cgcaagcaca acaacgaggc attcgccgga ttcttctctc agatcggaag actgtacaat
      841 gttcatcaca tttggtgtta caaatcccta caagaccgta aggagaccag ggaagcatcc
      901 tggcgaacac ccggatggga cgagtgtgtg gcctacacgg tgccattaat ccgagagatg
      961 cactgccgtg tccttgcgcc aactgagttc tcgccctcac aataattaag caccgggcgt
     1021 taccgtttta cctatttttt tttcgcgatc taagaagttg aagcctagca acgcccgatc
     1081 gaatttgctg tgaaatcaac gagaacgtaa ctttgccccc tttcctgttg aatagttatt
     1141 gtaaataatg ccagctaaat atgcaatcat ttttattttt ttttttaagt ataattaagg
     1201 tcaaagtgaa aattgctata ccagaaacat ttttacaagc cctacgtctg tatcaaccta
     1261 cgacctttga atttaacaaa accaattttg tttttataaa ataaagcaat tatgaaactg
     1321 tttataa