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LOCUS XM_070219062 3474 bp mRNA linear INV 09-DEC-2024 variant X1, mRNA. ACCESSION XM_070219062 VERSION XM_070219062.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3474 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3474 /gene="bbx" /note="bobby sox; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108065633" CDS 167..2647 /gene="bbx" /codon_start=1 /product="myb-like protein AA" /protein_id="XP_070075163.1" /db_xref="GeneID:108065633" /translation="MINGLSVGGGQQVAQVTPTGAAIKLHFAYNNSSNTSNINSSSNS NKNNNIYSGLKTVEQKMSNSNKKSGEVLKIIEKIRETSGGATGGRQGSGINYTGYATA RGLSPGEPRIISSAPQGSGSGSGSGSFLDYQVVATGSATSITPFFGVSLAAGSLRAVY KVAEAGKISGNAGNGGISSLGATGLRWLPMPMPGIKESKPSNAGGAAPGSPPGEAAKS ALVNPQPQRTEDQENAFRRIEDVHNYAKLQDYSSDTEAEDEEEEEEEEEELDEEEEDE EEQEIRVQLPVQQEITRIRREAAEEHVDVDVVTVPQDQEQDRRHVQEHQHQQQQEQLH QDPQQPADSIRPEHHARRPMNAFLIFCKRHRGIVKERYKTLENRAITKILGDWWAALD EQEKHCFTDLAQQNKDAFFNANPNFKWYKLPAPPLRTLATRPSNAATGLPLPNEDQPA SQPPTALQMQWAERGELMPRALLRRDYFKLADETQMGELSSLLQVQVQEKDYALQQVL SETSQFLSAHMPGGGGNPPNGNLNVNKRSLPSSNSSNSSEEEAVTGGSPSKKAKSSRS CKGKIYQELVNSGQLAAVAKKSKARSPPAGNLMISGGNFVDIPLDAGPNTPPVSPPER QNRSPDSRQKHLRSVSESSNGGFFDLEEKIKELPALSLDAYLQRKRSTKKKKKFSGSK KQRNSNSTGSVASNASAAAAVVAASTTSEQLVRIKQQQQAVGSQRRKARKESITRRDV SAIEQEVASILPLTINGSYYFNQSNAPAKAVTSVTSSSASPPLSSNSSSSSSSLSSPA AFDVTSSTSDLLILAEVAANRTEFTKSN" misc_feature 1217..1423 /gene="bbx" /note="high mobility group (HMG)-box found in HMG box-containing protein 2 (HBP2) and similar proteins; Region: HMG-box_HBP2; cd21989" /db_xref="CDD:438805" misc_feature order(1217..1222,1226..1240,1247..1252,1271..1273, 1307..1312,1319..1321,1328..1333,1352..1354,1364..1366, 1373..1375,1385..1387,1394..1396) /gene="bbx" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:438805" polyA_site 3474 /gene="bbx" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaacacagtc agttttcatt ctcatttgac atcatcaaca ttgaaattta attaaacgag 61 agcagaccct tcgattcgag gcaatacttt cattcaacgt aatatgctcg aggatcggga 121 ctagaaagat aggtggaaag ggaaaaggaa aacgaaagct gggaacatga tcaacggcct 181 gagcgttggc ggtggtcagc aggtggcgca ggtgacgcca acaggtgctg caattaaatt 241 gcactttgcc tacaacaaca gcagcaacac aagcaacatt aacagtagca gcaacagcaa 301 caaaaacaac aacatctaca gtggccttaa aacagtggag caaaaaatga gcaacagcaa 361 caaaaagtcg ggcgaagtgc tgaaaataat cgagaagatc cgggaaacaa gtggaggagc 421 aacaggtggc cgccaaggat cagggatcaa ctatacggga tatgcaacag ccaggggact 481 ttcacctggc gaacccagga taatttcaag cgccccccaa ggatcaggat ccggatcagg 541 atcaggaagt tttctggact accaagtggt ggccactgga tcagctacta gtattactcc 601 cttttttgga gtttccctgg ctgccggatc cttgagagca gtttacaagg tagccgaagc 661 aggaaaaata tcaggaaacg caggaaatgg aggtatttcc tccttgggag caactggact 721 ccgctggctg cccatgccca tgcccggaat caaggaatcc aagccttcga atgcaggagg 781 agcagcacct ggatcgccac ctggtgaagc ggccaaaagt gccttagtca atccacagcc 841 gcagcgcaca gaggaccaag aaaatgcctt tcgacgcatc gaggatgtgc acaactatgc 901 caagctgcag gactacagca gcgacaccga ggcggaggac gaggaggagg aagaggagga 961 ggaggaggag ctcgacgaag aggaggagga cgaggaggag caggagatcc gggtgcaact 1021 gccggtgcag caggagataa ctcgcattcg tcgcgaggcc gccgaagagc atgtggacgt 1081 ggatgtggtc acagtgccgc aggatcagga acaggatcgt cgtcatgtac aggagcatca 1141 gcatcagcaa cagcaggagc agcttcatca ggatccacag cagccggcgg acagcatccg 1201 accggagcac catgcccgcc gccccatgaa cgcgttcctc atcttctgca agcgacaccg 1261 cggcattgtc aaggagcgct acaagacttt ggagaaccgt gccatcacca agatactggg 1321 cgactggtgg gccgcccttg acgaacagga aaagcattgc ttcacggatt tggcgcagca 1381 gaacaaggac gccttcttca atgccaatcc caacttcaag tggtacaagc tgcccgctcc 1441 gccgctgcga acgctggcca cgcgtcccag caatgcggct accggtctac ctttacccaa 1501 cgaggatcag ccagccagtc agccgccgac tgccctccaa atgcagtggg ccgagcgagg 1561 cgagttgatg ccgcgtgccc tgctgcgccg cgactacttt aagctggcgg acgaaacgca 1621 aatgggcgaa ctgagctcgc tgttgcaagt ccaagtgcag gagaaggact acgccctgca 1681 gcaggtgctc agcgagacca gtcagtttct atccgcccac atgccaggcg gcggcggcaa 1741 tcctccgaat ggcaacttga acgtcaataa acgctcgttg ccctcgagca actcgagcaa 1801 ttccagcgag gaggaggccg tcactggtgg ctcgcccagc aagaaggcca agtcatcgcg 1861 ctcctgcaag ggcaagatct accaggagct agtcaactcg ggccaactgg cggccgtagc 1921 caagaagagc aaggctcgct caccgccggc aggaaatcta atgatcagcg gtggcaactt 1981 tgtggacata cccctagatg cgggtcccaa tacgccgccc gtttcgccac cggaacgcca 2041 gaacagaagt ccggactcca ggcagaagca tctgcgcagc gtctccgagt ccagcaacgg 2101 tggtttcttc gatctcgagg agaagatcaa ggagctgccg gccctcagct tggatgccta 2161 cttgcagcgc aagcgtagca ccaaaaagaa gaagaagttc agcggcagca agaagcaaag 2221 gaattcaaat agcaccggat cagtggcctc taatgcatca gcagcagcag ctgttgtggc 2281 agcctcgaca accagcgagc agctggtgag gatcaagcag cagcaacagg cggtgggcag 2341 ccagcggcgc aaggcgcgca aggagagcat cacgcggcgc gatgtcagcg ccatcgagca 2401 ggaggtggcc tccattctgc cgctgaccat caacggcagc tactacttca atcagagcaa 2461 tgcgcccgcg aaggcggtga cctctgtgac ctcgtcgtcg gcctcgccgc cgctgtcctc 2521 gaactcctcg tcgtcatcct cgtcgctctc ctcgccggcg gccttcgatg tgacctcctc 2581 tacctcagat ctactcattc tggccgaagt ggccgccaac cgcactgaat tcaccaagtc 2641 caactagcgc cagcagcagc agcagcagca ccaccgacac caccagcacc actggccgac 2701 cagcattacc aaaaacgatt tacgtaactt ctccttttcg attctgttga attatccaaa 2761 atattctctt ttttttttga aaccttggaa gtaggaaagt gcatgctaag catatcaact 2821 tttatagcag ggaagacgaa aacttcttta tattccgttt gagaactgta aactatttaa 2881 ttaggtttta aaatgttaca cacatattca gaatatttcg tttccttaac ccccccgtaa 2941 agtgcattat tatataatta aaaaaagaaa aagaaggaat attctccttg gaaagtagaa 3001 tgtcaattgc aaaccttgat agtctgagag tggggttagg cgcccttctt cgatacttac 3061 aatgctttaa gctatttgct ggtggtgccg catggagata gaaaacagac attcgttgat 3121 ctacaattta gtcaataata ttatgtaaaa acaaaaaagg aggtaattcg agaagagagt 3181 cgcggcggta gcgaattatg tattgtttgt tatgatggcg gccggagaaa atccgcgtca 3241 gtttcacacg catatatcca tatatttggt atttagataa cttgttctgt tttttttctt 3301 gttaagtttc tccttttatc gggccgcgtt cgcataagca gcaaaaacaa caacatccga 3361 acgctcatta atgttaatta ttattatttc taatatgtag tcgtaattta ttgctatatt 3421 tgtcaaaacg caaacaattt gcaaacaaaa atatattcat ttaaaagtgg aaaa