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LOCUS XM_070219056 6298 bp mRNA linear INV 09-DEC-2024 factor (C3G), transcript variant X8, mRNA. ACCESSION XM_070219056 VERSION XM_070219056.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6298 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6298 /gene="C3G" /note="C3G guanyl-nucleotide exchange factor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108067537" CDS 497..4774 /gene="C3G" /codon_start=1 /product="guanine nucleotide-releasing factor 2 isoform X8" /protein_id="XP_070075157.1" /db_xref="GeneID:108067537" /translation="MNILQKIDGSISSPSTPGTCSSGIGVGGGGCSSSSNNSINSGGY SAACTPPPPTSHQQHQGTPGGSSRGGGSVAGSGGASGVPPPAPPSAGSSGHKNSLKGT KLARRARSFKDDLIEKISLMRTTNNTLGRSHSPHSPRTKHGSKAPPTTEEVQRSTQTL ETHVKDISNALKHFRDVILKKKLEVLPGNGTVILETIASMYSVIQTYTLNENSAIMSG ATQQVYQSLGKLIKLCDEVMLSEESGECASLSNENVREVIDLLEDAVRNLVTLAQGKL KEQDQCAFRYSGTGLGGIGAAAEIMGKVTASPGVMMGSHLPGGGGAGGGGGIMRVSAV SAVSAESAAIAQRTSLPDIALTPKDRDILEQHSVNPMRGSHSTESILRDTSPPPKPPL PNRASNPPPLPPKRRSQPGSQPLGTGMGLGMGLGSSSSTTSTANQSTNISINSDLDCS SNISLLNYGVDRLSVRSRSPDENSQCSFDSALNHSRDEEDQQQQQNQQLQQRQFPKMP GMMDNNEEMDKLVSYSAAMETPLPLPIGGNGGVGNAAAPGGGGAAAAAATGGGETNSN RHSNESGFVSMREFQSVQSSTKSSSSNSEIAIGSSISSSTIEYQSSSSSVVSHSQSRQ ISSSSSSCTTTTTSSTTTGYGSSSSEQLEQSAPALPPKSIQRSSLTRHESTGGGTAAG DELDEASSGWASQSEMPEMRQLSPHHQLGLMGHHPHAASQLQHHWPSKHRSLIEGSGS CGAFDQRHLVGDHLEQEPPPLPMKKKHMFQSVAFSVLAYMEICSASTRSIEQHRHTMH AYNISRNISHSQTMNIMPMSKELSPELEIPPALPPKNYKQRMATSMGSSPSLQPIIVT TTPPPSPKPPLAENGSTTGRPDSRMATVCEELNDGMVGEEAMPVLDSNENVSDGQTFY CHSHQLPGELVVGEDGSGQPISTPQVLEEEEEPLQQQEEPATMAEESAVSAVDDPSEI LPAAKPEIAPAEDAEEEEEMLINMLEEVNITRYLILKKREEDGPEVKGGHIDALIVHA SRVQKVADNAFCEAFITTFRTFIQPIDVIEKLTHRYTYFFCQVQDNKQKAAKETFALL VRVVNDLTSTDLTSQLLSLLVEFVYQLVCSGQLYLAKLLRNKFVEKVTLYKEPKVYGF IGAELGGAGGGGAGAGIAGSGGSSAAGGGGGGGGGGGANQPSLLDLKSLEIAEQMTLL DAELFTKIEIPEVLLFAKDQCEEKSPNLNKFTEHFNKMSYWARSKILRLQDAKEREKH VNKFIKIMKHLRKMNNYNSYLALLSALDSGPIRRLEWQKGITEEVRSFCALIDSSSSF RAYRQALAETNPPCIPYIGLILQDLTFVHVGNQDYLSKGVINFSKRWQQYNIIDNMKR FKKCAYPFRRNERIIRFFDNFKDFMGEEEMWQISEKIKPRGRRPVNY" misc_feature 3536..3937 /gene="C3G" /note="Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif; Region: RasGEFN; smart00229" /db_xref="CDD:214571" misc_feature order(3593..3595,3728..3730,3740..3745,3752..3754, 3761..3766,3863..3865,3872..3874) /gene="C3G" /note="GTPase interaction site [polypeptide binding]; other site" /db_xref="CDD:100121" misc_feature 4061..4732 /gene="C3G" /note="Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking; Region: RasGEF; cd00155" /db_xref="CDD:238087" misc_feature order(4160..4168,4190..4195,4199..4207,4211..4216, 4223..4228,4235..4237,4334..4336,4343..4348,4352..4360, 4364..4375,4379..4384,4436..4438,4451..4459,4466..4468, 4505..4513,4520..4528,4532..4540,4544..4555,4598..4600, 4610..4612,4712..4714,4721..4726) /gene="C3G" /note="Ras interaction site [polypeptide binding]; other site" /db_xref="CDD:238087" polyA_site 6298 /gene="C3G" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gggttttcgg ccgcactgcg ccacgggcac actggctgga acagctactc aacgcatttt 61 gttgttgtgt tgcgcgtttc aaattgtatt gttatttttt tgtatttttt ttgttgcctc 121 gcctccgaac gggtgttgtt tcaaacgccg gccaaaagtg cggtgcgaat tgagtttcga 181 ttgagcttcg gttttcagtg aacatgccag gcggatcgta aacacacccg cttagattag 241 atgtgtgtgg tcagagcgag acgggacgaa atatcaaata aaaatacagt actgtgtgtg 301 tgagcgatac accaacaaca acgcagcagg cggagaactg aaaatgtgcg tgtgagagaa 361 agagaaggag aagagtgtgt gtgtgtgttt ttttttttgt gttgtatttt cggctatggc 421 gaaaaaggag aatgagcatt tcctccgttg cccagaggag aatctgtgaa tcctggcgaa 481 agcagacggc cccaccatga atatactgca gaaaatcgac ggcagcatca gttctccatc 541 cacgcccggc acctgttcca gtggcatcgg agtgggcggt ggcggctgca gcagcagcag 601 caacaacagc atcaacagcg gcggctactc cgccgcctgc accccgccac cacccacgtc 661 gcatcagcag catcagggaa cgcccggagg atctagtcgg ggaggaggat cggtagcggg 721 atcgggagga gcaagtggag tgccaccacc ggcaccgccc agtgcgggat cgtcgggcca 781 caagaacagc ctaaagggca ccaagctagc gcgccgggcg cgctccttca aggacgatct 841 gatcgagaag atctccctga tgcggaccac caacaacacc ctgggtcgct cccactcgcc 901 gcacagtccg cgcaccaagc acggatcgaa ggcgccgccg accaccgagg aggtgcagcg 961 ctccacccag acgctggaga cgcatgtcaa ggacatctcg aatgcgctca agcatttccg 1021 ggatgtaata ctcaagaaga agctggaggt gttgccgggc aacggtacgg tcatcctgga 1081 gaccatagcc agcatgtact ccgttatcca aacctataca ctgaacgaaa acagtgccat 1141 catgagcggc gccacgcagc aggtctacca gagcctgggc aagctcatca agctctgcga 1201 cgaggtgatg ctctccgagg agagcggcga gtgcgcctcc ctgagcaacg agaatgtgcg 1261 ggaggtgatc gatctgctgg aggatgcagt gaggaatctc gttacgctgg cgcagggaaa 1321 gctgaaggag caggatcagt gcgcgtttcg ctacagcggc actggcctgg gcggcatcgg 1381 agctgcggcc gagatcatgg gcaaggtgac ggcctcgccg ggcgtcatga tgggtagtca 1441 tttgcccggt ggcggtggtg ccggtggcgg tggcgggatt atgcgcgtct cagccgtctc 1501 agccgtctcc gccgaatcgg cggccatcgc acagcgcacc tcgctgccgg acatcgcact 1561 cacgcccaag gaccgcgaca tcctggagca gcacagtgtg aatcccatgc gcggctccca 1621 cagcaccgaa agcatcctgc gcgacacgag tccaccgccg aagccaccgc tgcccaaccg 1681 ggccagcaat ccgccacctt tgccgcccaa gcgacgcagt cagccgggca gtcagccctt 1741 gggcacgggc atgggtttgg gcatgggact gggctcctcc tcgtcgacca cctccaccgc 1801 caatcagtcg acgaatatca gcatcaactc ggacctggac tgcagctcaa acatctcgct 1861 gctgaactac ggcgtggatc gcctatcggt gcgttcgcgg tcaccggatg agaatagtca 1921 gtgctccttt gactcggcgt tgaatcactc gcgcgatgag gaggaccagc agcagcagca 1981 gaatcagcag ctgcagcagc ggcagtttcc aaagatgccc ggaatgatgg acaacaacga 2041 ggagatggac aagctggtca gctacagcgc cgccatggag acaccgcttc cgcttccgat 2101 cggtggtaat ggtggtgttg ggaatgctgc tgcccccgga ggaggaggag cagctgctgc 2161 agcggcgact ggtggcgggg aaactaacag caatcgccac tcaaacgaat cgggcttcgt 2221 ttcgatgcgc gagttccaga gtgtgcagtc ctccacaaag tcctccagca gcaactcgga 2281 gattgcgata gggagcagca ttagcagcag caccatcgag taccagtcgt cgtcgtcgtc 2341 ggtggtctcg cacagccagt cgcggcagat ctcgtcgagc agcagtagct gcaccaccac 2401 caccacgagc agcaccacca cgggctatgg gagcagcagc agcgagcagc tggagcaatc 2461 ggcgcccgct ttgccgccga agagcataca gaggagcagc ctgacccgcc acgagtcgac 2521 gggcggtgga actgcagccg gtgacgagct ggacgaggcc tcctccggat gggccagcca 2581 gtcggagatg cccgagatgc ggcagctgtc gccgcaccat cagctcggcc tcatgggcca 2641 tcatccgcat gccgcatccc agctgcagca ccactggccc tcgaagcatc gcagcctgat 2701 cgagggcagc ggcagctgcg gcgccttcga ccagcgtcac ctggtcggtg accacctgga 2761 gcaggagccg ccgccgctgc cgatgaagaa gaagcacatg tttcaaagtg tggccttttc 2821 ggttctggcc tacatggaga tctgctcggc gtccacgcga tccattgagc agcaccgcca 2881 cacgatgcac gcctacaaca ttagtcgcaa catctcgcac agccagacca tgaacatcat 2941 gcccatgagc aaggaactct cgccggagct cgagataccg cctgcgctgc cgccaaagaa 3001 ctacaagcag cgcatggcga caagcatggg ttcgtcgccc tcgctgcagc cgatcatagt 3061 gaccaccacg ccgccgccga gtccgaagcc gccgctggcc gagaacggat cgacgacggg 3121 caggccggac agccggatgg ccaccgtctg cgaggagctc aacgatggaa tggtcggtga 3181 ggaggcgatg cccgtgctgg acagcaatga gaacgtgagc gatggccaga ccttctattg 3241 ccactcgcat cagctgcccg gcgagttggt cgtgggcgag gacggctctg gacagccgat 3301 cagcacgcca caggtgctcg aggaggagga ggagccgctg cagcagcagg aggagccagc 3361 cacgatggca gaggagtcag ctgtctcggc cgtcgatgac cctagcgaga ttctgcccgc 3421 tgccaagcca gagattgccc ccgccgagga tgccgaggag gaggaggaga tgctgatcaa 3481 catgctggag gaggtcaaca tcacacggta cctgatactc aagaagcggg aggaggacgg 3541 gcccgaggtg aagggcggcc acatcgacgc actcatcgtc cacgccagcc gcgtccagaa 3601 ggtcgccgac aatgcattct gcgaggcctt catcaccacc ttccgcacct tcatccagcc 3661 gatcgacgtg atcgagaagc tgacccatcg ctacacatac ttcttctgtc aagtgcagga 3721 caacaagcag aaggccgcca aggagacctt tgcgctgctg gtccgagtcg tcaacgatct 3781 aacgtcgacg gatctcacca gccagctgct gagcctgctg gtggagtttg tctaccagtt 3841 ggtctgctct ggccagctct acttggccaa gttgctgcgc aacaagttcg tggagaaggt 3901 gacgctgtac aaggagccca aggtgtacgg cttcattggg gccgagttgg gtggagccgg 3961 cggtggtggc gccggagcgg gaatcgccgg gagcggtgga agcagtgcgg caggaggggg 4021 aggaggagga ggaggtggtg gtggggccaa ccagcccagc ctgctcgacc tcaagtcact 4081 ggagatcgcc gaacagatga cgctgctgga cgccgagctg ttcacgaaga tcgagatacc 4141 agaagtatta ctatttgcca aagatcagtg cgaggagaag tcgcccaacc tcaacaagtt 4201 caccgagcac ttcaacaaga tgtcctactg ggcgcgctcc aagattctgc gcctgcagga 4261 tgccaaggag cgggagaagc atgtgaacaa gttcatcaag atcatgaagc atctgcgcaa 4321 gatgaacaac tacaactcgt atctggcgct gctgtctgcc ctcgattcgg gtcccataag 4381 gagattggag tggcaaaagg gcatcaccga ggaggtgcgc tccttctgcg ccctcatcga 4441 ttccagctcc agttttcggg cctatcgcca ggccctggcc gaaactaatc cgccctgcat 4501 accctatatc ggcctaattc ttcaggatct gacgtttgtg catgtgggca accaggatta 4561 cttgtccaag ggcgtcatta acttctccaa gcgctggcag cagtacaaca taattgacaa 4621 catgaaacgt tttaagaaat gtgcctatcc atttcgacgc aacgagcgca tcatacgctt 4681 ctttgataac ttcaaggact ttatgggcga ggaggagatg tggcagatat ccgagaagat 4741 aaagccgcgc ggccgccgcc ccgttaacta ttagtcttca agcagcaaga gcaaaacacc 4801 aatattatat attacaagaa gaaatatata catatatata caatattaat taaacagtgc 4861 aaaacggttg ccgcgtcttg gaggatggag aagcatcgtc atcatcagga gcaggagcag 4921 ccgacaacta ttctaatggg tctgagcaat aacgttcgct attctctgtc tacatatata 4981 caattataca agatatctag ctatagatca gaaatacata tacttacata agatatagcg 5041 aagcagatac ggatacagat gcacgtgtag ccgcgtacaa ataacaacta acaaataacg 5101 agccgatctg tagtttaact attaagctct gtgacaagct aacaactccc caccaataat 5161 cgagtcccta tctatacggc tcccggaatt ttcatcggga aattcgccag cactagaaca 5221 ccaaacttaa gaaccaccag agatgaacaa ccaatcaaga aatcagcaat tttcgctttt 5281 gttttgagat ctctttttac acaagaacac aacgaatttt tggaaacaag ctacgtgtga 5341 acgtagaggc caaccgacaa actgacaaac tatattcgac gatatatata gagcgatatc 5401 tcggactatg aatcgatgca atccacgagc agaacaccaa gcaaccaagc acacagcgcg 5461 tattatgcaa ttctcttaaa acacccaaaa tatagaatac cctatccttg tgtgttagaa 5521 gttattgaaa atcagaaatc agaaaaatgg ataacagaag cggtgccgat caaatcaatc 5581 aaaaaattat ttcgcgactc aattaatcga agaaactttt aaagttacaa aaaaaaaaac 5641 caaacaaaaa aaaaacaaaa cccatgggag attacctaaa ttcaatttgc ttttaaatgt 5701 acgactaaca taaaaaatat ttatgggcat gtaataatag ttctaaatat agcttttgac 5761 tcctcctttc gatcctgcaa ggaataaatc tattgatatt gcgtgtaaaa ataatgaaca 5821 agagaacaaa tctggagcag agtcaaaact gaatgaaatc gaaattaaat cgacctcaag 5881 ttagttgttt ttactaagca aaatgcaaaa agcaaaactc tgtctcgtct gaaaactgaa 5941 aatattgtct tcttaattag aaatgggaaa aagaaaaaag gctgcttatt tgaagaattt 6001 aattcccgat caccatagcc atcttacttg aaagtaaata aattcatttg tgttgagtgg 6061 attcggtctt ctttttgctg ctgcttccgc tgccgctggc gcataaatta tttttactaa 6121 gctaacgaac ctaaggataa caatttattc gttttttttt ctcctatttt taaattaaat 6181 attttgtata tgtagagaaa attttcaatt gtaaatgtat gtatttgtaa ctaaatgtta 6241 tgcgtgtatt cgtaagaaga atgaaaatag ctaccacaat caatgtattt ttccttta