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LOCUS XM_070219054 6422 bp mRNA linear INV 09-DEC-2024 factor (C3G), transcript variant X5, mRNA. ACCESSION XM_070219054 VERSION XM_070219054.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6422 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6422 /gene="C3G" /note="C3G guanyl-nucleotide exchange factor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108067537" CDS 453..4898 /gene="C3G" /codon_start=1 /product="guanine nucleotide-releasing factor 2 isoform X5" /protein_id="XP_070075155.1" /db_xref="GeneID:108067537" /translation="MRVLNTELRLRFKNRKPRPFNRAASADDAMMDMGMGIANGMGAT TPSTPLTPLDQRLNGAISMHGSISSPSTPGTCSSGIGVGGGGCSSSSNNSINSGGYSA ACTPPPPTSHQQHQGTPGGSSRGGGSVAGSGGASGVPPPAPPSAGSSGHKNSLKGTKL ARRARSFKDDLIEKISLMRTTNNTLGRSHSPHSPRTKHGSKAPPTTEEVQRSTQTLET HVKDISNALKHFRDVILKKKLEVLPGNGTVILETIASMYSVIQTYTLNENSAIMSGAT QQVYQSLGKLIKLCDEVMLSEESGECASLSNENVREVIDLLEDAVRNLVTLAQGKLKE QDQCAFRYSGTGLGGIGAAAEIMGKVTASPGVMMGSHLPGGGGAGGGGGIMRVSAVSA VSAESAAIAQRTSLPDIALTPKDRDILEQHSVNPMRGSHSTESILRDTSPPPKPPLPN RASNPPPLPPKRRSQPGSQPLGTGMGLGMGLGSSSSTTSTANQSTNISINSDLDCSSN ISLLNYGVDRLSVRSRSPDENSQCSFDSALNHSRDEEDQQQQQNQQLQQRQFPKMPGM MDNNEEMDKLVSYSAAMETPLPLPIGGNGGVGNAAAPGGGGAAAAAATGGGETNSNRH SNESGFVSMREFQSVQSSTKSSSSNSEIAIGSSISSSTIEYQSSSSSVVSHSQSRQIS SSSSSCTTTTTSSTTTGYGSSSSEQLEQSAPALPPKSIQRSSLTRHESTGGGTAAGDE LDEASSGWASQSEMPEMRQLSPHHQLGLMGHHPHAASQLQHHWPSKHRSLIEGSGSCG AFDQRHLVGDHLEQEPPPLPMKKKHMFQSVAFSVLAYMEICSASTRSIEQHRHTMHAY NISRNISHSQTMNIMPMSKELSPELEIPPALPPKNYKQRMATSMGSSPSLQPIIVTTT PPPSPKPPLAENGSTTGRPDSRMATVCEELNDGMVGEEAMPVLDSNENVSDGQTFYCH SHQLPGELVVGEDGSGQPISTPQVLEEEEEPLQQQEEPATMAEESAVSAVDDPSEILP AAKPEIAPAEDAEEEEEMLINMLEEVNITRYLILKKREEDGPEVKGGHIDALIVHASR VQKVADNAFCEAFITTFRTFIQPIDVIEKLTHRYTYFFCQVQDNKQKAAKETFALLVR VVNDLTSTDLTSQLLSLLVEFVYQLVCSGQLYLAKLLRNKFVEKVTLYKEPKVYGFIG AELGGAGGGGAGAGIAGSGGSSAAGGGGGGGGGGGANQPSLLDLKSLEIAEQMTLLDA ELFTKIEIPEVLLFAKDQCEEKSPNLNKFTEHFNKMSYWARSKILRLQDAKEREKHVN KFIKIMKHLRKMNNYNSYLALLSALDSGPIRRLEWQKGITEEVRSFCALIDSSSSFRA YRQALAETNPPCIPYIGLILQDLTFVHVGNQDYLSKGVINFSKRWQQYNIIDNMKRFK KCAYPFRRNERIIRFFDNFKDFMGEEEMWQISEKIKPRGRRPVNY" misc_feature 3660..4061 /gene="C3G" /note="Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif; Region: RasGEFN; smart00229" /db_xref="CDD:214571" misc_feature order(3717..3719,3852..3854,3864..3869,3876..3878, 3885..3890,3987..3989,3996..3998) /gene="C3G" /note="GTPase interaction site [polypeptide binding]; other site" /db_xref="CDD:100121" misc_feature 4185..4856 /gene="C3G" /note="Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking; Region: RasGEF; cd00155" /db_xref="CDD:238087" misc_feature order(4284..4292,4314..4319,4323..4331,4335..4340, 4347..4352,4359..4361,4458..4460,4467..4472,4476..4484, 4488..4499,4503..4508,4560..4562,4575..4583,4590..4592, 4629..4637,4644..4652,4656..4664,4668..4679,4722..4724, 4734..4736,4836..4838,4845..4850) /gene="C3G" /note="Ras interaction site [polypeptide binding]; other site" /db_xref="CDD:238087" polyA_site 6422 /gene="C3G" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agttgggtgg ctcagctcgg tcagtcagtc gcacgcgaaa ttttcacaac atcggtgtgt 61 ggctgcggaa acagaaatat caaatatcga gtcaagttgt acaaatgaaa agctcgtgat 121 tcgtgattcg ttattcgcat ttgccccaca cttgtgtgtg atatcatata ggggcgattc 181 ccgatccccg aaatcattga ttcattcagt ttttttttcg agtgcttgat tgtgcgatca 241 gatcagtgat cagtgatcga aaagcgatcg atgcgggcca caaattgagt tggagtcgtt 301 gatgcgtttg ctccaattcc cagttaaaca ataacaaaag gcccgcccag aaagatcccc 361 gatcccctct ttatagagga ggaggtgtgt gatagtgtgt gtttgtgtag catctatttc 421 catctatttc cgccgttttc ccggtcaaca aaatgcgagt tctcaacacg gagctgcgcc 481 tgcgcttcaa aaatcgcaaa ccgcgaccct ttaatcgtgc tgccagtgcc gatgatgcga 541 tgatggacat gggaatgggg attgcaaatg ggatgggggc tacaaccccc tcgaccccct 601 tgacgccact cgatcagcgc ctgaatggag ccatcagtat gcacggcagc atcagttctc 661 catccacgcc cggcacctgt tccagtggca tcggagtggg cggtggcggc tgcagcagca 721 gcagcaacaa cagcatcaac agcggcggct actccgccgc ctgcaccccg ccaccaccca 781 cgtcgcatca gcagcatcag ggaacgcccg gaggatctag tcggggagga ggatcggtag 841 cgggatcggg aggagcaagt ggagtgccac caccggcacc gcccagtgcg ggatcgtcgg 901 gccacaagaa cagcctaaag ggcaccaagc tagcgcgccg ggcgcgctcc ttcaaggacg 961 atctgatcga gaagatctcc ctgatgcgga ccaccaacaa caccctgggt cgctcccact 1021 cgccgcacag tccgcgcacc aagcacggat cgaaggcgcc gccgaccacc gaggaggtgc 1081 agcgctccac ccagacgctg gagacgcatg tcaaggacat ctcgaatgcg ctcaagcatt 1141 tccgggatgt aatactcaag aagaagctgg aggtgttgcc gggcaacggt acggtcatcc 1201 tggagaccat agccagcatg tactccgtta tccaaaccta tacactgaac gaaaacagtg 1261 ccatcatgag cggcgccacg cagcaggtct accagagcct gggcaagctc atcaagctct 1321 gcgacgaggt gatgctctcc gaggagagcg gcgagtgcgc ctccctgagc aacgagaatg 1381 tgcgggaggt gatcgatctg ctggaggatg cagtgaggaa tctcgttacg ctggcgcagg 1441 gaaagctgaa ggagcaggat cagtgcgcgt ttcgctacag cggcactggc ctgggcggca 1501 tcggagctgc ggccgagatc atgggcaagg tgacggcctc gccgggcgtc atgatgggta 1561 gtcatttgcc cggtggcggt ggtgccggtg gcggtggcgg gattatgcgc gtctcagccg 1621 tctcagccgt ctccgccgaa tcggcggcca tcgcacagcg cacctcgctg ccggacatcg 1681 cactcacgcc caaggaccgc gacatcctgg agcagcacag tgtgaatccc atgcgcggct 1741 cccacagcac cgaaagcatc ctgcgcgaca cgagtccacc gccgaagcca ccgctgccca 1801 accgggccag caatccgcca cctttgccgc ccaagcgacg cagtcagccg ggcagtcagc 1861 ccttgggcac gggcatgggt ttgggcatgg gactgggctc ctcctcgtcg accacctcca 1921 ccgccaatca gtcgacgaat atcagcatca actcggacct ggactgcagc tcaaacatct 1981 cgctgctgaa ctacggcgtg gatcgcctat cggtgcgttc gcggtcaccg gatgagaata 2041 gtcagtgctc ctttgactcg gcgttgaatc actcgcgcga tgaggaggac cagcagcagc 2101 agcagaatca gcagctgcag cagcggcagt ttccaaagat gcccggaatg atggacaaca 2161 acgaggagat ggacaagctg gtcagctaca gcgccgccat ggagacaccg cttccgcttc 2221 cgatcggtgg taatggtggt gttgggaatg ctgctgcccc cggaggagga ggagcagctg 2281 ctgcagcggc gactggtggc ggggaaacta acagcaatcg ccactcaaac gaatcgggct 2341 tcgtttcgat gcgcgagttc cagagtgtgc agtcctccac aaagtcctcc agcagcaact 2401 cggagattgc gatagggagc agcattagca gcagcaccat cgagtaccag tcgtcgtcgt 2461 cgtcggtggt ctcgcacagc cagtcgcggc agatctcgtc gagcagcagt agctgcacca 2521 ccaccaccac gagcagcacc accacgggct atgggagcag cagcagcgag cagctggagc 2581 aatcggcgcc cgctttgccg ccgaagagca tacagaggag cagcctgacc cgccacgagt 2641 cgacgggcgg tggaactgca gccggtgacg agctggacga ggcctcctcc ggatgggcca 2701 gccagtcgga gatgcccgag atgcggcagc tgtcgccgca ccatcagctc ggcctcatgg 2761 gccatcatcc gcatgccgca tcccagctgc agcaccactg gccctcgaag catcgcagcc 2821 tgatcgaggg cagcggcagc tgcggcgcct tcgaccagcg tcacctggtc ggtgaccacc 2881 tggagcagga gccgccgccg ctgccgatga agaagaagca catgtttcaa agtgtggcct 2941 tttcggttct ggcctacatg gagatctgct cggcgtccac gcgatccatt gagcagcacc 3001 gccacacgat gcacgcctac aacattagtc gcaacatctc gcacagccag accatgaaca 3061 tcatgcccat gagcaaggaa ctctcgccgg agctcgagat accgcctgcg ctgccgccaa 3121 agaactacaa gcagcgcatg gcgacaagca tgggttcgtc gccctcgctg cagccgatca 3181 tagtgaccac cacgccgccg ccgagtccga agccgccgct ggccgagaac ggatcgacga 3241 cgggcaggcc ggacagccgg atggccaccg tctgcgagga gctcaacgat ggaatggtcg 3301 gtgaggaggc gatgcccgtg ctggacagca atgagaacgt gagcgatggc cagaccttct 3361 attgccactc gcatcagctg cccggcgagt tggtcgtggg cgaggacggc tctggacagc 3421 cgatcagcac gccacaggtg ctcgaggagg aggaggagcc gctgcagcag caggaggagc 3481 cagccacgat ggcagaggag tcagctgtct cggccgtcga tgaccctagc gagattctgc 3541 ccgctgccaa gccagagatt gcccccgccg aggatgccga ggaggaggag gagatgctga 3601 tcaacatgct ggaggaggtc aacatcacac ggtacctgat actcaagaag cgggaggagg 3661 acgggcccga ggtgaagggc ggccacatcg acgcactcat cgtccacgcc agccgcgtcc 3721 agaaggtcgc cgacaatgca ttctgcgagg ccttcatcac caccttccgc accttcatcc 3781 agccgatcga cgtgatcgag aagctgaccc atcgctacac atacttcttc tgtcaagtgc 3841 aggacaacaa gcagaaggcc gccaaggaga cctttgcgct gctggtccga gtcgtcaacg 3901 atctaacgtc gacggatctc accagccagc tgctgagcct gctggtggag tttgtctacc 3961 agttggtctg ctctggccag ctctacttgg ccaagttgct gcgcaacaag ttcgtggaga 4021 aggtgacgct gtacaaggag cccaaggtgt acggcttcat tggggccgag ttgggtggag 4081 ccggcggtgg tggcgccgga gcgggaatcg ccgggagcgg tggaagcagt gcggcaggag 4141 ggggaggagg aggaggaggt ggtggtgggg ccaaccagcc cagcctgctc gacctcaagt 4201 cactggagat cgccgaacag atgacgctgc tggacgccga gctgttcacg aagatcgaga 4261 taccagaagt attactattt gccaaagatc agtgcgagga gaagtcgccc aacctcaaca 4321 agttcaccga gcacttcaac aagatgtcct actgggcgcg ctccaagatt ctgcgcctgc 4381 aggatgccaa ggagcgggag aagcatgtga acaagttcat caagatcatg aagcatctgc 4441 gcaagatgaa caactacaac tcgtatctgg cgctgctgtc tgccctcgat tcgggtccca 4501 taaggagatt ggagtggcaa aagggcatca ccgaggaggt gcgctccttc tgcgccctca 4561 tcgattccag ctccagtttt cgggcctatc gccaggccct ggccgaaact aatccgccct 4621 gcatacccta tatcggccta attcttcagg atctgacgtt tgtgcatgtg ggcaaccagg 4681 attacttgtc caagggcgtc attaacttct ccaagcgctg gcagcagtac aacataattg 4741 acaacatgaa acgttttaag aaatgtgcct atccatttcg acgcaacgag cgcatcatac 4801 gcttctttga taacttcaag gactttatgg gcgaggagga gatgtggcag atatccgaga 4861 agataaagcc gcgcggccgc cgccccgtta actattagtc ttcaagcagc aagagcaaaa 4921 caccaatatt atatattaca agaagaaata tatacatata tatacaatat taattaaaca 4981 gtgcaaaacg gttgccgcgt cttggaggat ggagaagcat cgtcatcatc aggagcagga 5041 gcagccgaca actattctaa tgggtctgag caataacgtt cgctattctc tgtctacata 5101 tatacaatta tacaagatat ctagctatag atcagaaata catatactta cataagatat 5161 agcgaagcag atacggatac agatgcacgt gtagccgcgt acaaataaca actaacaaat 5221 aacgagccga tctgtagttt aactattaag ctctgtgaca agctaacaac tccccaccaa 5281 taatcgagtc cctatctata cggctcccgg aattttcatc gggaaattcg ccagcactag 5341 aacaccaaac ttaagaacca ccagagatga acaaccaatc aagaaatcag caattttcgc 5401 ttttgttttg agatctcttt ttacacaaga acacaacgaa tttttggaaa caagctacgt 5461 gtgaacgtag aggccaaccg acaaactgac aaactatatt cgacgatata tatagagcga 5521 tatctcggac tatgaatcga tgcaatccac gagcagaaca ccaagcaacc aagcacacag 5581 cgcgtattat gcaattctct taaaacaccc aaaatataga ataccctatc cttgtgtgtt 5641 agaagttatt gaaaatcaga aatcagaaaa atggataaca gaagcggtgc cgatcaaatc 5701 aatcaaaaaa ttatttcgcg actcaattaa tcgaagaaac ttttaaagtt acaaaaaaaa 5761 aaaccaaaca aaaaaaaaac aaaacccatg ggagattacc taaattcaat ttgcttttaa 5821 atgtacgact aacataaaaa atatttatgg gcatgtaata atagttctaa atatagcttt 5881 tgactcctcc tttcgatcct gcaaggaata aatctattga tattgcgtgt aaaaataatg 5941 aacaagagaa caaatctgga gcagagtcaa aactgaatga aatcgaaatt aaatcgacct 6001 caagttagtt gtttttacta agcaaaatgc aaaaagcaaa actctgtctc gtctgaaaac 6061 tgaaaatatt gtcttcttaa ttagaaatgg gaaaaagaaa aaaggctgct tatttgaaga 6121 atttaattcc cgatcaccat agccatctta cttgaaagta aataaattca tttgtgttga 6181 gtggattcgg tcttcttttt gctgctgctt ccgctgccgc tggcgcataa attattttta 6241 ctaagctaac gaacctaagg ataacaattt attcgttttt ttttctccta tttttaaatt 6301 aaatattttg tatatgtaga gaaaattttc aattgtaaat gtatgtattt gtaactaaat 6361 gttatgcgtg tattcgtaag aagaatgaaa atagctacca caatcaatgt atttttcctt 6421 ta