Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070219053 6191 bp mRNA linear INV 09-DEC-2024 factor (C3G), transcript variant X3, mRNA. ACCESSION XM_070219053 VERSION XM_070219053.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6191 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6191 /gene="C3G" /note="C3G guanyl-nucleotide exchange factor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108067537" CDS 96..4667 /gene="C3G" /codon_start=1 /product="guanine nucleotide-releasing factor 2 isoform X3" /protein_id="XP_070075154.1" /db_xref="GeneID:108067537" /translation="MPQFDESFLSDCALADRWHFYSYTVKQLPPKLNLNLSSNPNLTA NTNPSQDEHHHHRCLWKTHRQSWSPPDGNNNHSPSGNSNGNSNTCNISTGNTLHSIKF HRRRKYKKLARLALSTPAIPRQMDMDVVVDREFDMEMDADKDTPVPLKNAVCHGSISS PSTPGTCSSGIGVGGGGCSSSSNNSINSGGYSAACTPPPPTSHQQHQGTPGGSSRGGG SVAGSGGASGVPPPAPPSAGSSGHKNSLKGTKLARRARSFKDDLIEKISLMRTTNNTL GRSHSPHSPRTKHGSKAPPTTEEVQRSTQTLETHVKDISNALKHFRDVILKKKLEVLP GNGTVILETIASMYSVIQTYTLNENSAIMSGATQQVYQSLGKLIKLCDEVMLSEESGE CASLSNENVREVIDLLEDAVRNLVTLAQGKLKEQDQCAFRYSGTGLGGIGAAAEIMGK VTASPGVMMGSHLPGGGGAGGGGGIMRVSAVSAVSAESAAIAQRTSLPDIALTPKDRD ILEQHSVNPMRGSHSTESILRDTSPPPKPPLPNRASNPPPLPPKRRSQPGSQPLGTGM GLGMGLGSSSSTTSTANQSTNISINSDLDCSSNISLLNYGVDRLSVRSRSPDENSQCS FDSALNHSRDEEDQQQQQNQQLQQRQFPKMPGMMDNNEEMDKLVSYSFVSMREFQSVQ SSTKSSSSNSEIAIGSSISSSTIEYQSSSSSVVSHSQSRQISSSSSSCTTTTTSSTTT GYGSSSSEQLEQSAPALPPKSIQRSSLTRHESTGGGTAAGDELDEASSGWASQSEMPE MRQLSPHHQLGLMGHHPHAASQLQHHWPSKHRSLIEGSGSCGAFDQRHLVGDHLEQEP PPLPMKKKHMFQSVAFSVLAYMEICSASTRSIEQHRHTMHAYNISRNISHSQTMNIMP MSKELSPELEIPPALPPKNYKQRMATSMGSSPSLQPIIVTTTPPPSPKPPLAENGSTT GRPDSRMATVCEELNDGMVGEEAMPVLDSNENVSDGQTFYCHSHQLPGELVVGEDGSG QPISTPQVLEEEEEPLQQQEEPATMAEESAVSAVDDPSEILPAAKPEIAPAEDAEEEE EMLINMLEEVNITRYLILKKREEDGPEVKGGHIDALIVHASRVQKVADNAFCEAFITT FRTFIQPIDVIEKLTHRYTYFFCQVQDNKQKAAKETFALLVRVVNDLTSTDLTSQLLS LLVEFVYQLVCSGQLYLAKLLRNKFVEKVTLYKEPKVYGFIGAELGGAGGGGAGAGIA GSGGSSAAGGGGGGGGGGGANQPSLLDLKSLEIAEQMTLLDAELFTKIEIPEVLLFAK DQCEEKSPNLNKFTEHFNKMSYWARSKILRLQDAKEREKHVNKFIKIMKHLRKMNNYN SYLALLSALDSGPIRRLEWQKGITEEVRSFCALIDSSSSFRAYRQALAETNPPCIPYI GLILQDLTFVHVGNQDYLSKGVINFSKRWQQYNIIDNMKRFKKCAYPFRRNERIIRFF DNFKDFMGEEEMWQISEKIKPRGRRPVNY" misc_feature 3429..3830 /gene="C3G" /note="Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif; Region: RasGEFN; smart00229" /db_xref="CDD:214571" misc_feature order(3486..3488,3621..3623,3633..3638,3645..3647, 3654..3659,3756..3758,3765..3767) /gene="C3G" /note="GTPase interaction site [polypeptide binding]; other site" /db_xref="CDD:100121" misc_feature 3954..4625 /gene="C3G" /note="Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking; Region: RasGEF; cd00155" /db_xref="CDD:238087" misc_feature order(4053..4061,4083..4088,4092..4100,4104..4109, 4116..4121,4128..4130,4227..4229,4236..4241,4245..4253, 4257..4268,4272..4277,4329..4331,4344..4352,4359..4361, 4398..4406,4413..4421,4425..4433,4437..4448,4491..4493, 4503..4505,4605..4607,4614..4619) /gene="C3G" /note="Ras interaction site [polypeptide binding]; other site" /db_xref="CDD:238087" polyA_site 6191 /gene="C3G" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgctatcggc acattcgttt tggccaaaca ttttaaccac aacaaattgt tatgcgtgtt 61 gttgatgttg ctgcattagc tggccattat gcaatatgcc gcagtttgat gaatcttttt 121 tgagcgactg tgcgctggcc gatcgctggc atttctactc gtacacggtc aagcaattgc 181 caccgaaact gaatctgaat ctgagttcga atccaaatct aactgcaaat acaaatccca 241 gccaagatga acatcatcac catcgctgcc tttggaagac gcaccggcaa tcgtggtcac 301 cgcccgacgg caacaataat cacagtccga gtggcaacag caacggcaac agcaacacct 361 gcaacatcag taccggcaac acgttgcata gcatcaaatt ccacagacgt cgcaaataca 421 aaaagctggc acgattggcg ctatcaacgc cagcgattcc acggcagatg gatatggatg 481 tggttgtgga tagggagttc gatatggaga tggacgcaga caaagacaca cctgtgccgc 541 tcaagaatgc ggtgtgccac ggcagcatca gttctccatc cacgcccggc acctgttcca 601 gtggcatcgg agtgggcggt ggcggctgca gcagcagcag caacaacagc atcaacagcg 661 gcggctactc cgccgcctgc accccgccac cacccacgtc gcatcagcag catcagggaa 721 cgcccggagg atctagtcgg ggaggaggat cggtagcggg atcgggagga gcaagtggag 781 tgccaccacc ggcaccgccc agtgcgggat cgtcgggcca caagaacagc ctaaagggca 841 ccaagctagc gcgccgggcg cgctccttca aggacgatct gatcgagaag atctccctga 901 tgcggaccac caacaacacc ctgggtcgct cccactcgcc gcacagtccg cgcaccaagc 961 acggatcgaa ggcgccgccg accaccgagg aggtgcagcg ctccacccag acgctggaga 1021 cgcatgtcaa ggacatctcg aatgcgctca agcatttccg ggatgtaata ctcaagaaga 1081 agctggaggt gttgccgggc aacggtacgg tcatcctgga gaccatagcc agcatgtact 1141 ccgttatcca aacctataca ctgaacgaaa acagtgccat catgagcggc gccacgcagc 1201 aggtctacca gagcctgggc aagctcatca agctctgcga cgaggtgatg ctctccgagg 1261 agagcggcga gtgcgcctcc ctgagcaacg agaatgtgcg ggaggtgatc gatctgctgg 1321 aggatgcagt gaggaatctc gttacgctgg cgcagggaaa gctgaaggag caggatcagt 1381 gcgcgtttcg ctacagcggc actggcctgg gcggcatcgg agctgcggcc gagatcatgg 1441 gcaaggtgac ggcctcgccg ggcgtcatga tgggtagtca tttgcccggt ggcggtggtg 1501 ccggtggcgg tggcgggatt atgcgcgtct cagccgtctc agccgtctcc gccgaatcgg 1561 cggccatcgc acagcgcacc tcgctgccgg acatcgcact cacgcccaag gaccgcgaca 1621 tcctggagca gcacagtgtg aatcccatgc gcggctccca cagcaccgaa agcatcctgc 1681 gcgacacgag tccaccgccg aagccaccgc tgcccaaccg ggccagcaat ccgccacctt 1741 tgccgcccaa gcgacgcagt cagccgggca gtcagccctt gggcacgggc atgggtttgg 1801 gcatgggact gggctcctcc tcgtcgacca cctccaccgc caatcagtcg acgaatatca 1861 gcatcaactc ggacctggac tgcagctcaa acatctcgct gctgaactac ggcgtggatc 1921 gcctatcggt gcgttcgcgg tcaccggatg agaatagtca gtgctccttt gactcggcgt 1981 tgaatcactc gcgcgatgag gaggaccagc agcagcagca gaatcagcag ctgcagcagc 2041 ggcagtttcc aaagatgccc ggaatgatgg acaacaacga ggagatggac aagctggtca 2101 gctacagctt cgtttcgatg cgcgagttcc agagtgtgca gtcctccaca aagtcctcca 2161 gcagcaactc ggagattgcg atagggagca gcattagcag cagcaccatc gagtaccagt 2221 cgtcgtcgtc gtcggtggtc tcgcacagcc agtcgcggca gatctcgtcg agcagcagta 2281 gctgcaccac caccaccacg agcagcacca ccacgggcta tgggagcagc agcagcgagc 2341 agctggagca atcggcgccc gctttgccgc cgaagagcat acagaggagc agcctgaccc 2401 gccacgagtc gacgggcggt ggaactgcag ccggtgacga gctggacgag gcctcctccg 2461 gatgggccag ccagtcggag atgcccgaga tgcggcagct gtcgccgcac catcagctcg 2521 gcctcatggg ccatcatccg catgccgcat cccagctgca gcaccactgg ccctcgaagc 2581 atcgcagcct gatcgagggc agcggcagct gcggcgcctt cgaccagcgt cacctggtcg 2641 gtgaccacct ggagcaggag ccgccgccgc tgccgatgaa gaagaagcac atgtttcaaa 2701 gtgtggcctt ttcggttctg gcctacatgg agatctgctc ggcgtccacg cgatccattg 2761 agcagcaccg ccacacgatg cacgcctaca acattagtcg caacatctcg cacagccaga 2821 ccatgaacat catgcccatg agcaaggaac tctcgccgga gctcgagata ccgcctgcgc 2881 tgccgccaaa gaactacaag cagcgcatgg cgacaagcat gggttcgtcg ccctcgctgc 2941 agccgatcat agtgaccacc acgccgccgc cgagtccgaa gccgccgctg gccgagaacg 3001 gatcgacgac gggcaggccg gacagccgga tggccaccgt ctgcgaggag ctcaacgatg 3061 gaatggtcgg tgaggaggcg atgcccgtgc tggacagcaa tgagaacgtg agcgatggcc 3121 agaccttcta ttgccactcg catcagctgc ccggcgagtt ggtcgtgggc gaggacggct 3181 ctggacagcc gatcagcacg ccacaggtgc tcgaggagga ggaggagccg ctgcagcagc 3241 aggaggagcc agccacgatg gcagaggagt cagctgtctc ggccgtcgat gaccctagcg 3301 agattctgcc cgctgccaag ccagagattg cccccgccga ggatgccgag gaggaggagg 3361 agatgctgat caacatgctg gaggaggtca acatcacacg gtacctgata ctcaagaagc 3421 gggaggagga cgggcccgag gtgaagggcg gccacatcga cgcactcatc gtccacgcca 3481 gccgcgtcca gaaggtcgcc gacaatgcat tctgcgaggc cttcatcacc accttccgca 3541 ccttcatcca gccgatcgac gtgatcgaga agctgaccca tcgctacaca tacttcttct 3601 gtcaagtgca ggacaacaag cagaaggccg ccaaggagac ctttgcgctg ctggtccgag 3661 tcgtcaacga tctaacgtcg acggatctca ccagccagct gctgagcctg ctggtggagt 3721 ttgtctacca gttggtctgc tctggccagc tctacttggc caagttgctg cgcaacaagt 3781 tcgtggagaa ggtgacgctg tacaaggagc ccaaggtgta cggcttcatt ggggccgagt 3841 tgggtggagc cggcggtggt ggcgccggag cgggaatcgc cgggagcggt ggaagcagtg 3901 cggcaggagg gggaggagga ggaggaggtg gtggtggggc caaccagccc agcctgctcg 3961 acctcaagtc actggagatc gccgaacaga tgacgctgct ggacgccgag ctgttcacga 4021 agatcgagat accagaagta ttactatttg ccaaagatca gtgcgaggag aagtcgccca 4081 acctcaacaa gttcaccgag cacttcaaca agatgtccta ctgggcgcgc tccaagattc 4141 tgcgcctgca ggatgccaag gagcgggaga agcatgtgaa caagttcatc aagatcatga 4201 agcatctgcg caagatgaac aactacaact cgtatctggc gctgctgtct gccctcgatt 4261 cgggtcccat aaggagattg gagtggcaaa agggcatcac cgaggaggtg cgctccttct 4321 gcgccctcat cgattccagc tccagttttc gggcctatcg ccaggccctg gccgaaacta 4381 atccgccctg cataccctat atcggcctaa ttcttcagga tctgacgttt gtgcatgtgg 4441 gcaaccagga ttacttgtcc aagggcgtca ttaacttctc caagcgctgg cagcagtaca 4501 acataattga caacatgaaa cgttttaaga aatgtgccta tccatttcga cgcaacgagc 4561 gcatcatacg cttctttgat aacttcaagg actttatggg cgaggaggag atgtggcaga 4621 tatccgagaa gataaagccg cgcggccgcc gccccgttaa ctattagtct tcaagcagca 4681 agagcaaaac accaatatta tatattacaa gaagaaatat atacatatat atacaatatt 4741 aattaaacag tgcaaaacgg ttgccgcgtc ttggaggatg gagaagcatc gtcatcatca 4801 ggagcaggag cagccgacaa ctattctaat gggtctgagc aataacgttc gctattctct 4861 gtctacatat atacaattat acaagatatc tagctataga tcagaaatac atatacttac 4921 ataagatata gcgaagcaga tacggataca gatgcacgtg tagccgcgta caaataacaa 4981 ctaacaaata acgagccgat ctgtagttta actattaagc tctgtgacaa gctaacaact 5041 ccccaccaat aatcgagtcc ctatctatac ggctcccgga attttcatcg ggaaattcgc 5101 cagcactaga acaccaaact taagaaccac cagagatgaa caaccaatca agaaatcagc 5161 aattttcgct tttgttttga gatctctttt tacacaagaa cacaacgaat ttttggaaac 5221 aagctacgtg tgaacgtaga ggccaaccga caaactgaca aactatattc gacgatatat 5281 atagagcgat atctcggact atgaatcgat gcaatccacg agcagaacac caagcaacca 5341 agcacacagc gcgtattatg caattctctt aaaacaccca aaatatagaa taccctatcc 5401 ttgtgtgtta gaagttattg aaaatcagaa atcagaaaaa tggataacag aagcggtgcc 5461 gatcaaatca atcaaaaaat tatttcgcga ctcaattaat cgaagaaact tttaaagtta 5521 caaaaaaaaa aaccaaacaa aaaaaaaaca aaacccatgg gagattacct aaattcaatt 5581 tgcttttaaa tgtacgacta acataaaaaa tatttatggg catgtaataa tagttctaaa 5641 tatagctttt gactcctcct ttcgatcctg caaggaataa atctattgat attgcgtgta 5701 aaaataatga acaagagaac aaatctggag cagagtcaaa actgaatgaa atcgaaatta 5761 aatcgacctc aagttagttg tttttactaa gcaaaatgca aaaagcaaaa ctctgtctcg 5821 tctgaaaact gaaaatattg tcttcttaat tagaaatggg aaaaagaaaa aaggctgctt 5881 atttgaagaa tttaattccc gatcaccata gccatcttac ttgaaagtaa ataaattcat 5941 ttgtgttgag tggattcggt cttctttttg ctgctgcttc cgctgccgct ggcgcataaa 6001 ttatttttac taagctaacg aacctaagga taacaattta ttcgtttttt tttctcctat 6061 ttttaaatta aatattttgt atatgtagag aaaattttca attgtaaatg tatgtatttg 6121 taactaaatg ttatgcgtgt attcgtaaga agaatgaaaa tagctaccac aatcaatgta 6181 tttttccttt a