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LOCUS XM_070219029 7905 bp mRNA linear INV 09-DEC-2024 19D (RhoGAP19D), transcript variant X6, mRNA. ACCESSION XM_070219029 VERSION XM_070219029.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7905 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7905 /gene="RhoGAP19D" /note="Rho GTPase activating protein at 19D; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:108068035" CDS 893..5848 /gene="RhoGAP19D" /codon_start=1 /product="serine-rich adhesin for platelets isoform X4" /protein_id="XP_070075130.1" /db_xref="GeneID:108068035" /translation="MLQNSNAAAAAQAASAASAVAAAAANNAALAASSIQPKLIVIRR RPNQGFGFTLRHFIAYPPEDDQSSATAASASVSVSGNWPQEASSMAGSSSGSSSSVAV AGITGLEPTSPTSLPPYQVKAMETIFIKEVQANGPAHYANLQTGDRVLMVNNQPIAGI AYSTIVSMIKQTPSVLTLHVVPKECDVLQMHYTSIAHTPESNRLTMSTHSPSLLANGS HKTTFPAATAAAAAVAAAGGGGGDAAAPPAASSSAPAPTPAPSAPAPLPISIPIPVAA VVEPQKTKSLVEEHPDPTYDVIGGTGGGHEFIETPNGLEDVRLSAHGSRRASMSSDMR SSIHIDAELNGKYVPNELEAFETEIEIKSSCINGKRMSEYRSWRQVKLEIKGDLLRIY SGRHAKSEHNVIELDIRNFKFFDESLDKKKYLIRMQSKPSPSGAHLATLGNELNLDEA SAAGNHDKLLTSSGSSGVNEATQQQQQAATNSSSALTASTSSSTCSSGGPYTEILFKT KSSNEMKRLFGLLQWKDSLNYDDNEHQQQGKQLAEPQKTAASASYLDDVQGGGGTAAA GAADSSPLSSHSGGITDHHHVSALPAAAAIVAATSDSISPVMKARKSSSHKHIPDKDL GSPKSKNWKDLLFRRGGSGSGTSGGVSHHDLASPSSCAAKQIGSIGVPLRSCPMSKVN ACVPHLVEVCTNIVETKGLGVVGIYRIPGNKAAISELSELVNTKDFQFESCASDDRWE DVNVVSSLLKLFIRSLPDALMPASYYINFIEADKKFGLERIVLLREIVESLPRHPYET MKHLIRHLCRVSGNCEVNRMEPKNLAIIFGPSIIRTPNDTLETAVKDMKHQCRIVELL VTQYDYFFEGGSLPDLAEVSGGTAAVNAAQPQQQTQEDQTSMLLHNLSKIERITERET TRTSRFMPQLRRKTHGKRSAVNSDTYSGESVLVSGSSSSNNTSTTTHTSSSTSSSNTI TTTISTTTIQQRRAQRKAVQSICDQALILLLPTPPSSVSLPFQSLDYAKVSTSASASA SSTASTSSSCKVASASASASSSSSSTTKFSSSSSSASSTTAVAVSSSISSTSSKLLSA NFKKRSTGGFLGSRSSHQTTRKASLDEKDSGQSSGSLGHSLGVGLNLAKEQQRSSVDI SILLTDDDSSSRLSDTGSMSLTTITDTLDSKLRNLRSGSESNDENGSPEFPKNRRHTL GQPLHLHSENIPYADESPERLFHQFCNPLDAPPLSLHLSRSCTATNTIGDEKPSKQSG SVAPLPPSLLKAAHKLQHSATVPIHQGSSTAPTSGAATPVGTPTGSSGVVVVGAIPSR SSSSSVTTLTKSIHPRFSNYLSYERSSAAAAGGGTSTGSAGGAASEDDSEGSTTSDPK EKLLLGERPSPSFFLERYNKKRRDHRLFRSASFNCRNYSTRHMTSTQPAGVASGVAVV VGAACCQALSAATGLTKDEKTDMNLTKKRQIQNKQNRSIKRRHTVGGPHDYSASNGSC SNHAHGHDLAAINYNHHNRHHQQQLLKLGSASSAGGGSVAAAAETTTTTTTTTTVLRR LGGTAATGQAGGEASVALPGSSSGSSSNNNNSPQSDGSNGNGGAAGVPSSVQPTGVTN SSGSNSGSSSNSSSNSTTPAGNGDQVLEVGIRIKNINRGRF" misc_feature 1001..1432 /gene="RhoGAP19D" /note="canonical PDZ domain; Region: PDZ_canonical; cl49608" /db_xref="CDD:483948" misc_feature order(1037..1057,1280..1282,1289..1291,1376..1378, 1388..1390,1397..1402) /gene="RhoGAP19D" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467153" misc_feature 2894..3484 /gene="RhoGAP19D" /note="GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to...; Region: RhoGAP; cl02570" /db_xref="CDD:470621" misc_feature order(3014..3016,3140..3142,3152..3154,3356..3358, 3365..3370,3440..3442) /gene="RhoGAP19D" /note="GTPase interaction site; other site" /db_xref="CDD:239860" misc_feature 3014..3016 /gene="RhoGAP19D" /note="catalytic residue [active]" /db_xref="CDD:239860" polyA_site 7905 /gene="RhoGAP19D" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cacctctact atccactcga aaatcacatc ggaacgaaat cgagtggaaa gcggagcgaa 61 aaaacaagaa agtagattaa aaacacacaa ttacaattaa ttaattgtaa tttgcccgaa 121 aatgcaaaac agtgtgtgcg cgcgcgaacg cagggttatc aattgaatta aaatcaacaa 181 ctttgcaaaa atttaaacga taacaaaaat atacaaaagg aggaaatcaa caataatttg 241 taaaaaaaaa atccaggaaa acatcaagaa aattataatc atcctgtgtt tttgatgacc 301 tccgtttacc cttcgatcga tcggcaagga gattccgtag catcggtact atggtaatat 361 cgatcggtac gatgggcctc gttgggccgc agccacatcg aaaatttgca acgtatcgca 421 ggctgtaaag gaaaattccc tcccctccac acacacacac agagacagag gaaaaaacaa 481 aactgcaaat cgaaattgca gatagaggat aagagatatt tagccgatag aagaggaaaa 541 ccaggggtga agcaccaccc ccacccaccg tcacacaaat gagggtgcca ccaacaacag 601 gttgaccacc aaaaaaaaaa acagaaaaaa aagagtagag agtaaataaa aaataacaaa 661 caaaataaca tagtaataaa aaaagccaac cgcacgacaa atagaaaagg caacaacaac 721 agaaaccacc aagccacaaa gccagccacc gaaggagata gagcgcctaa aacaaagcga 781 gagagtgtgt aaacagaaga ggcgaaatac gaaatacgaa atacaaaata caaaatacga 841 aaagcagtag gaaaaccccc cctggaaaac cactagaggc ccccgctaca aaatgttaca 901 aaactcgaac gccgctgccg ctgcgcaggc ggcctcagcg gcttcagcgg tggcagcagc 961 agcggccaac aatgcggcac tggcggcctc ctccatccag cccaagctca tcgtcatccg 1021 ccggcgaccg aaccagggat tcggcttcac gctgcgccac ttcatcgcct atccgccgga 1081 agatgaccag tcatcggcaa cggcggcatc ggcatcggta tcggtatcgg gcaactggcc 1141 acaggaagcc tccagtatgg ccggcagcag cagcggcagc agcagcagcg tcgccgtcgc 1201 cgggatcacc ggtttggagc caacgtcacc gacgtcgctg ccgccgtacc aagtgaaagc 1261 gatggagacc attttcatca aagaggtgca ggcgaacgga ccggcccact acgccaacct 1321 gcagacgggc gaccgcgtgc tgatggtcaa caaccagccg atcgctggca tcgcctacag 1381 caccatcgtc tcgatgatca agcagacgcc gtcggtcctc acgctgcacg tggtgcccaa 1441 ggagtgcgat gtcctgcaga tgcactatac gagcattgcc cacacgccgg agtcgaatcg 1501 cctgaccatg tcgacgcact cgccctcgct gctggccaac ggctcccaca agaccacatt 1561 tccagcagca acagcagcag cagcagcagt tgcagcagca ggaggcggcg gaggagatgc 1621 agcagctcct ccagcggctt cttcatctgc tccagcaccc actcccgcac cctccgcacc 1681 cgcacccctg cccatttcga tccccattcc ggtggctgct gtcgtggagc cgcagaagac 1741 gaaatccctg gtggaggagc atccggatcc cacctacgat gtgatcggcg gcactggcgg 1801 cggtcacgag ttcatcgaga cgcccaacgg cctggaggat gtgcgtctgt cggcccacgg 1861 gagtcgcagg gcctccatga gcagcgacat gcgcagcagc atccacattg atgccgagtt 1921 gaatggcaag tatgtgccca acgaactgga ggccttcgaa acggagatcg agatcaagtc 1981 ctcctgcatc aacggaaagc gcatgtccga gtaccgatcg tggcgtcagg tgaagctgga 2041 gatcaagggc gatttgctgc gcatctactc aggccgccat gccaaatcgg agcacaatgt 2101 gatagaactc gatattagaa actttaagtt cttcgacgag tcgctggata agaagaagta 2161 cttgattcgc atgcagtcga agccatcgcc cagtggcgcc cacttggcca cgctgggcaa 2221 cgagttgaat ttggatgagg catctgctgc tggtaatcac gacaagctgc tgacctcctc 2281 gggcagcagc ggtgtaaacg aagccactca gcagcagcaa caggcggcga cgaactcatc 2341 atcagccctc accgcatcca cctcctcgtc cacctgcagc agcggcggtc cctacacgga 2401 gatcctcttc aagaccaaga gcagcaacga gatgaaacgt ctgtttggcc tgctgcagtg 2461 gaaggacagc ctcaactacg atgataatga gcatcagcaa cagggaaaac aactggcgga 2521 gccacagaag acagcggcca gtgccagcta tctggacgat gtccagggtg gcggaggaac 2581 agcagctgcc ggagcagcgg acagctctcc gctgagctcc cattcgggtg ggattacaga 2641 tcatcatcat gtctcggctc tgccagcggc tgcggccatt gtggccgcca ccagcgactc 2701 catatcgccg gtgatgaagg ccaggaagtc gtcgtcgcac aagcatatac ccgacaagga 2761 tttgggctcg ccaaagtcga agaactggaa ggatttgctc ttccgccgcg gcggcagtgg 2821 cagtggcact agcggaggag tctctcatca cgacctcgcc tcgccatcct cgtgtgcggc 2881 caagcagatc ggctccattg gcgttcccct gcgcagctgc cccatgtcga aggtgaatgc 2941 ctgcgtgccg catctcgtgg aggtgtgcac gaacattgtg gagaccaagg gcctgggcgt 3001 ggtgggcatc tatcgcatac ccggcaacaa ggcggccatt tcggagctct ccgagctggt 3061 caacaccaag gatttccagt tcgagagctg cgcgagtgac gatcgctggg aggatgtgaa 3121 tgtggtgagc agtctgctca agctgttcat tcgcagcctg ccggatgctt tgatgccggc 3181 tagctactac attaatttca tcgaggcgga caagaagttc ggcctggaga ggattgtgct 3241 gctgcgcgag attgtggagt cgctgccgcg tcatccgtac gagaccatga agcatttgat 3301 acggcatctg tgccgcgtta gcggaaattg tgaggtcaat cgcatggagc ccaagaacct 3361 ggccatcatc tttgggccct cgatcatccg gacgccgaac gacacgctgg agacggcggt 3421 caaggatatg aagcatcagt gccgcatcgt tgagctgctg gtcacgcagt acgactactt 3481 ctttgagggt ggcagtctgc cggatttggc ggaggtgagc ggcggtacgg ccgccgtgaa 3541 tgccgcccag ccgcagcagc agacgcagga ggatcagacg agcatgctgc tgcataatct 3601 ctcgaagatc gagcggatca ccgagcggga gacgacgcgc acgtcgcgct tcatgccgca 3661 gctgaggcgc aagacgcatg gcaagcggag cgccgtaaac tcggacacgt actccggcga 3721 gagtgttctg gtaagcggga gctcctcctc caacaacaca agcaccacca cccacaccag 3781 tagtagcaca agtagtagca acaccatcac cacaaccatc agcaccacca ccatccagca 3841 gcgacgggcg cagcgcaagg ctgtgcagag catttgcgac caggctctaa tcctgctcct 3901 gcccacaccc ccctcctccg tctctcttcc ctttcagtcg ctggactacg ccaaggtatc 3961 gacctccgcc tcggcatccg ccagcagtac cgccagtacc tcgagcagct gcaaggtggc 4021 ctccgcatcc gcctccgctt cgtcctcgtc gagttccacc accaagttca gctcctcgtc 4081 gtcgtcggcc tcctcgacca cggcggtggc cgtttcctca tccatctcgt ccacatcctc 4141 caagttgttg agtgccaact tcaagaagcg cagcactgga ggatttctgg gttcgagatc 4201 atcgcaccag acgacgcgca aggcgagcct ggatgagaag gactcgggtc agtcgtcggg 4261 cagtctgggc cacagcctgg gcgtgggcct gaatctggcc aaggagcagc agcgcagcag 4321 cgtggacata tccatactgc tgacggacga cgactccagc agcaggctca gcgatacggg 4381 ttccatgtcg ctgaccacca tcacagacac gctggacagc aagctgcgca atttgaggag 4441 cggctctgaa tcgaacgacg agaacggatc gcccgagttc cccaagaacc ggcggcacac 4501 cctcggccag ccgctgcacc tgcactccga gaacattccg tatgcggacg agtcgcccga 4561 gcggctcttc catcagtttt gcaatcccct cgacgcacca ccgctgtcgc tccatctgag 4621 tcgctcctgc acggccacca atacaattgg cgatgagaag ccatcgaagc agtcgggcag 4681 cgttgctcct ttgccgccca gtctgctgaa ggcggcccac aagctgcagc actcggccac 4741 ggtgcccata catcagggta gctccacggc acccacgagt ggagcggcca cgcccgttgg 4801 cacgcccact gggagcagtg gcgtcgtcgt cgtcggcgcc attccctcgc gcagctcctc 4861 gagcagcgtg accacgctaa ccaagagcat acatcccaga ttcagtaact atttgagcta 4921 cgagaggagc agcgcagcgg cagctggtgg aggaacctct actggatccg caggaggagc 4981 tgcctccgag gacgattccg agggctcgac caccagtgat cccaaggaga agctgctgct 5041 cggcgaacga ccctcgccgt cgttttttct cgagcgctac aacaagaaga gacgcgatca 5101 tcggttattt cggagtgcca gcttcaattg ccgcaactac tccaccaggc acatgacgag 5161 cacacaacca gcgggagtag ccagtggagt agctgtagta gtgggcgcgg cctgctgcca 5221 ggcactgagt gccgccaccg ggctgaccaa ggacgagaag actgacatga acctgaccaa 5281 gaagcgccag atccagaaca agcagaatcg ttcgattaag cgacgccaca cggtcggtgg 5341 tccgcacgac tattcggcca gcaatggcag ctgctcgaat catgcgcacg gtcatgattt 5401 ggcggccata aactacaatc accacaatcg ccatcatcag cagcagctgc tgaagctggg 5461 cagcgcctcg tccgccggcg gaggcagtgt ggcggcggcg gccgagacga cgacgaccac 5521 aacgaccacc accacggtgc tgcggcgatt gggaggaaca gcggcgactg ggcaggctgg 5581 cggcgaggcg agtgtggccc tgccaggatc tagttcggga tcgagcagca ataataataa 5641 ctcgccgcaa agcgatggaa gtaatggaaa tggcggagca gctggagttc cctcgagtgt 5701 ccaaccaact ggggtcacca acagcagcgg cagcaacagc ggcagcagca gcaacagcag 5761 cagcaacagc accacgcccg ccggcaacgg agatcaggtg ttggaggtgg gcatacgcat 5821 caagaacatc aaccgaggac gcttctaaag aaaaggatct ctgtaaatct gtaaaatcac 5881 atatatcaaa agtgcagatt gctgcagtga aacctcaacc taaacctaaa atagcagttg 5941 cttaacaagc acagtttaca cgagtattaa cagggtttaa tatgagaaac aaaggcatag 6001 gatgaagtta tttaacaata gtctgttaaa cacacaaatg ctaaacacac attttaaaaa 6061 caaaagttta aatgaatgtt aacctgagta aagttgctaa acaaaaaaaa acaggagtcg 6121 ttgtagtaag aagaatttga agatttccat gtagcaatgt caaagaattt gatttaagct 6181 actagaaaat gcgcaaaaaa tactctaacc tacttcgatt ctgtaaaaaa tagtcaccat 6241 aatctatatt actatatatc tatttcaacg tacagttgca aagttgagtc cgaattgggt 6301 tttaaaagtt aaccaaaagg aatgtaggaa gcgatttgat tgcaaaacaa atcagcagag 6361 cagttaaaat acgtattatc acatattcta tcacgatata ttatatattc atgtgcagca 6421 gatcccaggg agttgtgttg taagcctaaa aactgtcaaa cgacattgaa tattcataaa 6481 aaaaaaaccc aagcagacaa acagtaataa agatacatcc gagattgaaa cgctaaatgc 6541 actctactcc taaatacaca actcccgggg caaaaggaaa tcttaacaat gcaacgcaga 6601 aaaaacaatc ttagatgaaa actctacgag ggcaggaagt aatttattcg cacacacaaa 6661 atacacaaaa cacacaaatt aaatgggaac caagctaaga tctggattta gacagagaga 6721 gatatatagc gagagacaga gagagatata tgcggggaga cgaagggtta gagatagaga 6781 gagagagaga gaactatttt gtaaaacgta tacaacacaa tacagaaaaa tcgcataaat 6841 atccacctat gtataggaac aatcgaaagt gtcgcctgtc cgggaaatcg gacgagtccc 6901 cctgacaacc aagttgtgct agggatccct tgatagggat cgctttttgt ttagtttaaa 6961 tgtgcatttg tttatttttt atttgtgtac ctgtgtacct gctgtaagaa aaaagtggag 7021 gaaaagggga tcccattttt ggtgccttaa attatttgct ttaaattctg gaaaacctat 7081 ttttctaccc acaacatttt ttttttatat tttttggata aacaaaattt tttttacctc 7141 gggcggtgct gtaggaaatg catgatatag gtgcagctat ataactctat agcagggaca 7201 tatacacata tattccgcac aaaaagctaa tgtctagaca ggcgaccgga agagggatac 7261 catgttcgaa atggggtttg attgataaag tgaccatatg cttacgcata taacgcatga 7321 gaaacggcat aaatttacat ttacatatat aatattatat atttttgtgt agtttgtata 7381 tgatttaagt ttggcaacaa caagaacgca taaaagtaca tgcaaatata tatgattaag 7441 caattagatt atagttgtat agtattcctc ccattttttt tgctgtatat acgatttaat 7501 tttttttcat ttcattcaca attatgattt acatcccccc ccccacaaaa aaatggatat 7561 ataacggatt atatattttg tacgcatttt gttttgttac ccgaaggcag aaacaaaaac 7621 tagaaggcag gatatgagta tatagaaaga accccaagcg cgtaacgttg ctatataaat 7681 attatgatta actaaaaaca attttttgtt agactttagg tagttatttt ttaaaaattg 7741 tattttctat tatacatgta tacatctata tatattttat ttgtattatg attttttttc 7801 aaacaaaaat aaatgtggat tttctataat gctataaacg acgacacaat aaaaaagaaa 7861 caaccaatat taagaataaa ttgtacaagt ataaaccgga aacaa