PREDICTED: Drosophila takahashii VAMP-associated protein 33kDa

LOCUS       XM_070219014            1738 bp    mRNA    linear   INV 09-DEC-2024
            (Vap33), transcript variant X2, mRNA.
ACCESSION   XM_070219014
VERSION     XM_070219014.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1738
                     /gene="Vap33"
                     /note="VAMP-associated protein 33kDa; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:108070181"
     CDS             288..1091
                     /gene="Vap33"
                     /codon_start=1
                     /product="vesicle-associated membrane protein-associated
                     protein B/C"
                     /protein_id="XP_070075115.1"
                     /db_xref="GeneID:108070181"
                     /translation="MSKPLFDLPLTIDPDNELRFVGPFNRPVVTIMTLRNNSNLPLVF
                     KIKTTAPKRYCVRPNIGKILPFRTTQVEICLQPFIYDQQEKNKHKFMVQSVLAPVDAD
                     LTDLNKLWKELEPEQLMDAKLKCVFEMPSAEANAENTSGGGASGVGSGSAGGGSVGAN
                     TSSASAEALESKPKLSSEDKPSSLPDTAEHVESLAGEIKALRETNSELRKENLHLKDQ
                     ITRYRSSPAIKQVNEPYAPVLAEKQIPVFYIAIAIAAAILSLLLGKFFL"
     misc_feature    312..632
                     /gene="Vap33"
                     /note="MSP (Major sperm protein) domain; Region:
                     Motile_Sperm; pfam00635"
                     /db_xref="CDD:459882"
     polyA_site      1738
                     /gene="Vap33"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attattccac tccgcggtta cactttttct gctgacgaat ttctggcttt tttgcatgca
       61 ttttgcaagt gaagttttcc aagaaaccga agagtgaaaa ccacgaaagt cgagcgaatc
      121 gagaggaaat tcagctggaa ttcggtgaag aaagccaacg agaacaacag aaaagctggg
      181 cgaaaacagg acgcacaaaa aagaattaaa atcaaaagaa gagaggcgca aagcggagag
      241 agcaaaaaga agcagagaca acaacaacaa caacaaaagc cgccacaatg agcaaaccac
      301 tctttgatct tccgttgacc attgacccag acaatgagtt gcgttttgtg ggtcccttca
      361 accgacccgt cgtcacaatc atgactctgc gcaacaattc aaatctgccc ctggtcttca
      421 agattaaaac aaccgccccg aagcgctact gcgtacgtcc aaacatcggc aagatcctgc
      481 cctttcgaac gactcaggtg gagatctgcc tgcagccatt catctatgat cagcaggaga
      541 agaacaagca caagttcatg gtgcagagcg tgctggcacc cgtggatgct gatctgaccg
      601 atttgaataa attgtggaag gaactggagc cggagcagct gatggacgcc aagctgaagt
      661 gcgtgttcga gatgcccagc gccgaggcga atgcggagaa cactagcggc ggcggagcta
      721 gcggcgtcgg aagcggaagt gccggaggcg gaagcgtggg cgccaacact agttcagcca
      781 gcgccgaggc gctcgagagc aagccgaagc tctccagcga ggataagccc tcgagtttgc
      841 ccgataccgc agagcatgtg gagtcgctgg ccggagagat caaggcgctg cgtgagacaa
      901 acagcgaact gcgaaaagaa aatcttcact tgaaggatca aatcacacgc taccgcagct
      961 cgccggccat caagcaggtg aatgagccct atgccccagt tctggctgag aagcagattc
     1021 cggtctttta cattgcaatt gccattgctg cggccatctt aagcctcctg ctgggcaaat
     1081 tctttctctg aatgccataa acgaacgcca gcaacatgct atatgcaacg tgcagcagca
     1141 gcagcagcaa caacagcaag aaaagcggca acaccatcaa acagcaacag caacaacagc
     1201 agcagcagca gcaactaaca acagcaacca caacgaaaga acaaccagca gcagcagcag
     1261 aagcgaagca ttcaaatcca ccatcggcaa atgaagcaaa aaccatagaa aagtaaagct
     1321 gacaaaacta agaaaaaaaa aacaaaaaaa tcagaaagaa agaacagcag agaagggaaa
     1381 accgtaggag gaaagacgta aaaatcgtat tttcgcaaaa ggggaaatct cacaagaaat
     1441 attcaacaaa aaaaaaagat gcacgtctac atggtcccat acgtatattg ctcagatttt
     1501 cgattgcatt ttgattcgct actattaatt tttaagcatc ttactttaaa aagcttcaca
     1561 actccttttt tttttattcg tttttgatgc atttgataaa cggacaaagt gaagtacttc
     1621 aaagaataac caaaattatc attaaataga acttatcata ccttttcgga gagaatacaa
     1681 aatataagaa tacaaaattg ttactcaagt gcgagaataa acttcagttt taattaca