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LOCUS XM_070219005 2536 bp mRNA linear INV 09-DEC-2024 protein (Grip), transcript variant X4, mRNA. ACCESSION XM_070219005 VERSION XM_070219005.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2536 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2536 /gene="Grip" /note="Glutamate receptor interacting protein; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:108065695" CDS 304..2181 /gene="Grip" /codon_start=1 /product="glutamate receptor-interacting protein 2 isoform X4" /protein_id="XP_070075106.1" /db_xref="GeneID:108065695" /translation="MVGLGLCRAESFPVLLDCSHGAGIILGESPAGGGAGGGSAGGGA VAIAQILNDSVADRSGCIQAGDRIVAINKMYSLDAGAMRQLLEGGSGRGGAGNNSGTP PANWLELEIEFDMPDAVVPASGVFSVKLLRAGKCGLGLSVSGSSHGGLVISDVKMGSP AHRSGSLRSGDILLAVDQHPVQHFNVDALLKEQQNPSSSASSASSDFTTLTIKRIVLP DFLPMSSPIYSNCPPMAMGMGGMGVSSSSTDHDLYSSAYVTAGKYADCVSLKSRTPQP DYFRVPSMDDASLQSVQLRSGSGCSGNGGSRGVNEAGNGWSTAGVNSRSFGAASNQLP NTQSLTTELPEEEDEQEQLYPGYELNRYASVDCTALPPPMENKVYGSAASSSSKSSGS SLHQIIFTVRLEPKGGLLGITLAGSEDITKPITISGLVEGGIAHKNGQIHVSDQLLAI DEHSVQGMPLSHATSLLQNLGDLVDLKILRSHDLANGSHLPQTQAIYAKVQRRPRSPS ANTEASKESGNGNSNGCGAGSNGNGGNGKPRVFHVTLYKDKVYDDYGFSVSDGLYERG VFINRIRSGGPADMCGLLKPFDRIMQVNEMKTQDFDCCLTVPLIAAAGDKIEMIMQRT E" misc_feature <448..945 /gene="Grip" /note="periplasmic serine protease, Do/DeqQ family; Region: degP_htrA_DO; TIGR02037" /db_xref="CDD:273938" misc_feature 679..>834 /gene="Grip" /note="canonical PDZ domain; Region: PDZ_canonical; cl49608" /db_xref="CDD:483948" misc_feature 1489..1743 /gene="Grip" /note="PDZ domain 6 of glutamate receptor-interacting protein 1 (GRIP1) and GRIP2, and related domains; Region: PDZ6_GRIP1-2-like; cd06683" /db_xref="CDD:467171" misc_feature order(1528..1548,1582..1584,1591..1593,1681..1683, 1693..1695,1702..1707) /gene="Grip" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467171" misc_feature 1915..2172 /gene="Grip" /note="PDZ domain 7 of glutamate receptor-interacting protein 1 (GRIP1) and GRIP2, and related domains; Region: PDZ7_GRIP1-2-like; cd06685" /db_xref="CDD:467173" misc_feature order(1960..1980,2011..2013,2020..2022,2110..2112, 2122..2124,2131..2136) /gene="Grip" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467173" misc_feature order(2080..2082,2089..2091,2104..2106,2113..2118, 2125..2130) /gene="Grip" /note="GRASP-1 binding site [polypeptide binding]; other site" /db_xref="CDD:467173" ORIGIN 1 tttgacaatc gatcggaacc aaatcggaaa taccaaaatg gaatagaaaa taatagagga 61 gagtggaggt cataaatagt ggtctgggca gaggacacgc agctggcttg gataagctgc 121 ggatcacaga actccagtct cctcggcaaa ggacacacgg cattgggcag tcccaagtac 181 agctttagca ccctggagtc ccgcaaatcc tcgacggcgg gtcgccagcg tcagcgtttc 241 gcccgcaaga gttccctgcc gctggagaat gcaggggtca acactccggg atcctcggtg 301 ggcatggtgg gtctgggcct ctgccgcgcc gagagctttc ccgttctcct cgactgcagc 361 cacggagcgg gcattatcct gggggaatct ccagcaggag gaggagcagg aggaggatct 421 gccggcggag gagctgtggc cattgcccag atcctcaacg attcggtggc cgatcgcagt 481 ggctgcattc aggcgggcga tcgcattgtg gccatcaaca agatgtacag cctggatgcg 541 ggggccatga ggcagctgct cgagggagga tcgggtcgcg gaggagcagg aaacaactcg 601 ggaacgccgc cggccaattg gctggagctg gagatcgagt tcgatatgcc ggatgccgtg 661 gtgcctgcca gtggtgtctt tagtgtcaag ctgctgaggg ccggcaaatg tggattggga 721 ctgagtgtga gtggctccag ccatggcggc ctggtcattt cggacgtcaa gatgggcagt 781 ccggcgcatc gcagcggctc tttgagatcg ggcgacatcc tgctggccgt cgaccagcat 841 ccagtgcagc atttcaatgt ggacgcactg ctcaaggagc agcagaatcc ctcatcctcc 901 gcgtcctccg cctcctcgga tttcaccacg ctcaccatca agcggatcgt cctgcccgac 961 ttcctgccca tgtccagtcc catctacagc aattgcccac cgatggccat gggaatgggc 1021 ggcatgggtg tctcgtccag cagcacggat cacgatctgt atagcagcgc ctatgtgacg 1081 gcgggcaagt acgccgactg cgtctccctg aagtcgcgga ctccgcagcc ggactacttc 1141 cgggtgccca gcatggacga cgccagtctg cagtcggtgc agctgcgttc cggatcgggg 1201 tgctcgggga atggcggcag tcgaggggtc aacgaggcag gcaacggctg gtccaccgcc 1261 ggcgtcaaca gccgatcctt tggggcagcc agcaaccaac tgcccaacac ccagagcctg 1321 accaccgagc tgcccgagga ggaggacgaa caggagcagc tgtatcccgg ctacgagctc 1381 aatcgctatg ccagtgtgga ctgcaccgcc ctgccgccgc ccatggagaa caaggtctac 1441 ggatcggcgg ccagttcgag cagcaagagc agcgggagca gcctgcacca gatcatcttc 1501 acggtgcgtc tggagcccaa ggggggactg ctgggcatca ctctggctgg cagcgaggat 1561 atcaccaagc ccatcacgat cagtggtctc gtggagggtg gcattgcgca caagaatggc 1621 cagatccatg tgagtgacca gctgctggcc atcgacgagc actcggtgca gggcatgccc 1681 ctttcgcatg ccaccagtct gctgcagaat ctcggcgatc tggtggacct gaagatcctg 1741 cggagtcacg atctggccaa cggcagtcat ctgccgcaga cgcaggccat ttacgcgaag 1801 gtccagcggc gtccgcggag tccttcggcg aatacggagg ccagcaagga gtcggggaat 1861 ggaaatagca acggatgtgg agctggcagt aatggcaatg gcggaaatgg aaagccccgc 1921 gtcttccatg tcaccctgta caaggacaag gtgtacgacg actatggctt ctcggtttcc 1981 gatggactct acgagcgggg cgtcttcatc aacaggattc gcagtggcgg gccggcggat 2041 atgtgcggtc tcctgaagcc cttcgatcgc attatgcagg ttaacgaaat gaagacgcag 2101 gactttgatt gctgccttac tgttccgctg atcgccgccg ccggcgataa aatcgagatg 2161 atcatgcagc gcacagagtg atcctcagtg tgcgcgatcc ttatgttaaa ctagttgtac 2221 gctaagctaa tcctaagtgc cattgctagc ccataatatt atatacgata tcccctccgt 2281 attctgtatt ctgtatgctg tactccttac cgaacgaaac gtaatccacg aaacagaaag 2341 ataaacacca accttcaagg acaataagct ctctaaacaa cagtctgcca taaccaaaaa 2401 atgtcctcta tttaatataa atctgccata attttacatt aattctacgc taaatttgtt 2461 tcctagcaaa taaataatca taccgacagt ttgtttcaaa ctaaacaatc aagaactatg 2521 agtaatttca ttgctg