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LOCUS XM_070219004 3294 bp mRNA linear INV 09-DEC-2024 protein (Grip), transcript variant X3, mRNA. ACCESSION XM_070219004 VERSION XM_070219004.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3294 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3294 /gene="Grip" /note="Glutamate receptor interacting protein; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:108065695" CDS 167..2938 /gene="Grip" /codon_start=1 /product="glutamate receptor-interacting protein 1 isoform X3" /protein_id="XP_070075105.1" /db_xref="GeneID:108065695" /translation="MNMLCAGGSDAGPAIVEIEYSLPEYISQNSLCVTSKLAQITVER ESGCLGLTLRGGADYPLIVTHVRPHGPVYKTGRIKPGDRLLRVDNVSLIGKTLAEAQQ IIKCGGHVSGYTNLTIEYDVSVVQSVEFSMGPLIIEIERPMNDKLGLVLCNYTPAMAA SGSGSSTPSSGEKIEESTGVFIASILPASIADRCGALSVGDQVLSIDDTMIEHTAFSP DEVMTILDTSTGRGYTQMQIMPAHALARRGHTALGSPKYSFSTLESRKSSTAGRQRQR FARKSSLPLENAGVNTPGSSVGMVGLGLCRAESFPVLLDCSHGAGIILGESPAGGGAG GGSAGGGAVAIAQILNDSVADRSGCIQAGDRIVAINKMYSLDAGAMRQLLEGGSGRGG AGNNSGTPPANWLELEIEFDMPDAVVPASGVFSVKLLRAGKCGLGLSVSGSSHGGLVI SDVKMGSPAHRSGSLRSGDILLAVDQHPVQHFNVDALLKEQQNPSSSASSASSDFTTL TIKRIVLPDFLPMSSPIYSNCPPMAMGMGGMGVSSSSTDHDLYSSAYVTAGKYADCVS LKSRTPQPDYFRVPSMDDASLQSVQLRSGSGCSGNGGSRGVNEAGNGWSTAGVNSRSF GAASNQLPNTQSLTTELPEEEDEQEQLYPGYELNRYASVDCTALPPPMENKVYGSAAS SSSKSSGSSLHQIIFTVRLEPKGGLLGITLAGSEDITKPITISGLVEGGIAHKNGQIH VSDQLLAIDEHSVQGMPLSHATSLLQNLGDLVDLKILRSHDLANGSHLPQTQAIYAKV QRRPRSPSANTEASKESGNGNSNGCGAGSNGNGGNGKPRVFHVTLYKDKVYDDYGFSV SDGLYERGVFINRIRSGGPADMCGLLKPFDRIMQVNEMKTQDFDCCLTVPLIAAAGDK IEMIMQRTE" misc_feature 272..529 /gene="Grip" /note="PDZ domain 2 of glutamate receptor-interacting protein 1 (GRIP1) and GRIP2, and related domains; Region: PDZ2_GRIP1-2-like; cd06681" /db_xref="CDD:467169" misc_feature order(308..328,356..358,365..367,455..457,467..469, 476..481) /gene="Grip" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467169" misc_feature 563..886 /gene="Grip" /note="canonical PDZ domain; Region: PDZ_canonical; cl49608" /db_xref="CDD:483948" misc_feature order(602..622,713..715,722..724,818..820,830..832, 839..844) /gene="Grip" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467153" misc_feature <1205..1702 /gene="Grip" /note="periplasmic serine protease, Do/DeqQ family; Region: degP_htrA_DO; TIGR02037" /db_xref="CDD:273938" misc_feature 1436..>1591 /gene="Grip" /note="canonical PDZ domain; Region: PDZ_canonical; cl49608" /db_xref="CDD:483948" misc_feature 2246..2500 /gene="Grip" /note="PDZ domain 6 of glutamate receptor-interacting protein 1 (GRIP1) and GRIP2, and related domains; Region: PDZ6_GRIP1-2-like; cd06683" /db_xref="CDD:467171" misc_feature order(2285..2305,2339..2341,2348..2350,2438..2440, 2450..2452,2459..2464) /gene="Grip" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467171" misc_feature 2672..2929 /gene="Grip" /note="PDZ domain 7 of glutamate receptor-interacting protein 1 (GRIP1) and GRIP2, and related domains; Region: PDZ7_GRIP1-2-like; cd06685" /db_xref="CDD:467173" misc_feature order(2717..2737,2768..2770,2777..2779,2867..2869, 2879..2881,2888..2893) /gene="Grip" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467173" misc_feature order(2837..2839,2846..2848,2861..2863,2870..2875, 2882..2887) /gene="Grip" /note="GRASP-1 binding site [polypeptide binding]; other site" /db_xref="CDD:467173" ORIGIN 1 atttggcgat ttggtgactt ggtgatttga acgcaacgat ctttcttatc cgccggtggt 61 tggatctctg agtcccgtgg gccatgcggc ggatttcttg gcgcccggcg atcgccttca 121 tcagatcgat ggaatctcga cgattggctt gagcaaccag aaggtgatga acatgctctg 181 cgctggagga tcggatgcgg gtcctgccat cgtggagatc gagtactcgc tgcccgaata 241 catttcccag aacagcctct gtgtgacctc gaagctggcg cagatcaccg tggagcggga 301 aagtggatgc ctgggcctga cgctgagggg cggggccgac tatccgctga tcgtcaccca 361 tgtgaggccc catggacccg tctataagac cggtcgcatc aagcccggcg atcgcttgtt 421 gcgcgtcgat aatgtctcac ttattggcaa aacgctggca gaggcgcaac agatcatcaa 481 gtgcggcggt catgtttccg ggtataccaa cctgaccatc gagtacgatg tttccgtggt 541 gcagagcgtt gagttctcga tgggaccgct gatcatcgag atcgagcggc cgatgaacga 601 taagttgggc ctggtacttt gcaactatac gccggcgatg gccgcttccg gttccggttc 661 gagtacgcca tccagtgggg agaagatcga ggaatcgacg ggcgtcttta tagccagcat 721 cctgcccgct agcattgcag atcgttgcgg cgccttatcc gtcggcgatc aggtgctctc 781 catcgacgac acaatgatcg agcacaccgc cttcagtccc gacgaggtga tgaccatatt 841 ggacaccagc acgggtcgcg gctacacgca gatgcagatc atgcccgctc acgcgttggc 901 ccgtcgcgga cacacggcat tgggcagtcc caagtacagc tttagcaccc tggagtcccg 961 caaatcctcg acggcgggtc gccagcgtca gcgtttcgcc cgcaagagtt ccctgccgct 1021 ggagaatgca ggggtcaaca ctccgggatc ctcggtgggc atggtgggtc tgggcctctg 1081 ccgcgccgag agctttcccg ttctcctcga ctgcagccac ggagcgggca ttatcctggg 1141 ggaatctcca gcaggaggag gagcaggagg aggatctgcc ggcggaggag ctgtggccat 1201 tgcccagatc ctcaacgatt cggtggccga tcgcagtggc tgcattcagg cgggcgatcg 1261 cattgtggcc atcaacaaga tgtacagcct ggatgcgggg gccatgaggc agctgctcga 1321 gggaggatcg ggtcgcggag gagcaggaaa caactcggga acgccgccgg ccaattggct 1381 ggagctggag atcgagttcg atatgccgga tgccgtggtg cctgccagtg gtgtctttag 1441 tgtcaagctg ctgagggccg gcaaatgtgg attgggactg agtgtgagtg gctccagcca 1501 tggcggcctg gtcatttcgg acgtcaagat gggcagtccg gcgcatcgca gcggctcttt 1561 gagatcgggc gacatcctgc tggccgtcga ccagcatcca gtgcagcatt tcaatgtgga 1621 cgcactgctc aaggagcagc agaatccctc atcctccgcg tcctccgcct cctcggattt 1681 caccacgctc accatcaagc ggatcgtcct gcccgacttc ctgcccatgt ccagtcccat 1741 ctacagcaat tgcccaccga tggccatggg aatgggcggc atgggtgtct cgtccagcag 1801 cacggatcac gatctgtata gcagcgccta tgtgacggcg ggcaagtacg ccgactgcgt 1861 ctccctgaag tcgcggactc cgcagccgga ctacttccgg gtgcccagca tggacgacgc 1921 cagtctgcag tcggtgcagc tgcgttccgg atcggggtgc tcggggaatg gcggcagtcg 1981 aggggtcaac gaggcaggca acggctggtc caccgccggc gtcaacagcc gatcctttgg 2041 ggcagccagc aaccaactgc ccaacaccca gagcctgacc accgagctgc ccgaggagga 2101 ggacgaacag gagcagctgt atcccggcta cgagctcaat cgctatgcca gtgtggactg 2161 caccgccctg ccgccgccca tggagaacaa ggtctacgga tcggcggcca gttcgagcag 2221 caagagcagc gggagcagcc tgcaccagat catcttcacg gtgcgtctgg agcccaaggg 2281 gggactgctg ggcatcactc tggctggcag cgaggatatc accaagccca tcacgatcag 2341 tggtctcgtg gagggtggca ttgcgcacaa gaatggccag atccatgtga gtgaccagct 2401 gctggccatc gacgagcact cggtgcaggg catgcccctt tcgcatgcca ccagtctgct 2461 gcagaatctc ggcgatctgg tggacctgaa gatcctgcgg agtcacgatc tggccaacgg 2521 cagtcatctg ccgcagacgc aggccattta cgcgaaggtc cagcggcgtc cgcggagtcc 2581 ttcggcgaat acggaggcca gcaaggagtc ggggaatgga aatagcaacg gatgtggagc 2641 tggcagtaat ggcaatggcg gaaatggaaa gccccgcgtc ttccatgtca ccctgtacaa 2701 ggacaaggtg tacgacgact atggcttctc ggtttccgat ggactctacg agcggggcgt 2761 cttcatcaac aggattcgca gtggcgggcc ggcggatatg tgcggtctcc tgaagccctt 2821 cgatcgcatt atgcaggtta acgaaatgaa gacgcaggac tttgattgct gccttactgt 2881 tccgctgatc gccgccgccg gcgataaaat cgagatgatc atgcagcgca cagagtgatc 2941 ctcagtgtgc gcgatcctta tgttaaacta gttgtacgct aagctaatcc taagtgccat 3001 tgctagccca taatattata tacgatatcc cctccgtatt ctgtattctg tatgctgtac 3061 tccttaccga acgaaacgta atccacgaaa cagaaagata aacaccaacc ttcaaggaca 3121 ataagctctc taaacaacag tctgccataa ccaaaaaatg tcctctattt aatataaatc 3181 tgccataatt ttacattaat tctacgctaa atttgtttcc tagcaaataa ataatcatac 3241 cgacagtttg tttcaaacta aacaatcaag aactatgagt aatttcattg ctgt