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LOCUS XM_070218997 8447 bp mRNA linear INV 09-DEC-2024 variant X12, mRNA. ACCESSION XM_070218997 VERSION XM_070218997.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8447 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8447 /gene="X11Lbeta" /note="X11Lbeta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108060874" CDS 481..6615 /gene="X11Lbeta" /codon_start=1 /product="uncharacterized protein X11Lbeta isoform X6" /protein_id="XP_070075098.1" /db_xref="GeneID:108060874" /translation="MVSTTLTTLAAGQTTSSSNHHHHHHHQQDQLQQQQHQQLQQQQH QQLPYQRLQPHAAAAAAAVGQQRGFYALNGSLELDCDSSNSNSYQQHQQQQQQQQQPP LILSQALLSPSPPLNDQINLLFPKCRPKQQPQQQQQQPQQHQTAQQQHAHLADVNTNS NSSSNRSSSPTTAGEREPLEIVGASSSPPPAKATPTSTPSYYKSVNIITQSPPPHSAS SHSSESLSSVTPRISTNPFLCAPLTPPTPPHHQQQQQQQQQQETEATGESAVERSRSG GAAGEEPDYPASFYYHTVGESRRGPGGYAEMPRKRSAALPASNRQQQQQQQQQQQQLL NGNGSQNPFIKENYWEAPPTRASLLLHSPTEYSEEQQQQQQQQQHIHASARRAYHQQR EQVYGISQRAQQQQQQQQPHILRVGRSPVNRSFSQQQQQQIAAARSNPCADGLTPLAS HYLYGSKSSLDQQPGDWEPREQRKLRLREEREREREREREREREREHLLLEQQQQLQL QEVQAARENHLSHLVGQQQQQQRKRHVYGEERDRERERERERDRERDLERDHRLVNGN ADPNESWQQYEGSPRRIGVTTSNLGPVTAASGASAIAGAATPADESEPPAAVEVATTP PQQQQQQQQQQVPMAAVPPLSSTATSLQKTAARAALAALAQSHPHNSHNILSSLLPNS SNPNPLNPSQMQIHSPQQPMQNYPVRPGFPQRIISPPNREPRSNSPPLQQQQQHQQQQ QHQQQQHFASLMSNHSNNSNTNKQPLSSDNNAEDTSNDVSEIGTISDLTAPEAVGLGL AIGSAAGEVASRAATPPLLALGPPTAVAGSSANGTATGNGSGNGNGNGTVSGNATAAA TGLGPLSLHTKSSTFDYLYEFSETRKVLEEFFKCPSTDEQPIMENGSDVDSIDIQYEF HSNFERDDEDLAEEEEAEDDEEGDDDADEENDEAEDEDEPLGQDRDQNYRQQAPPTAG HASERLVYGGYGGQQSQPQLISQPLGVGMGVGVGVARRHYSGSPLMRDFDFFLDSTSR SSGERDGDQDGLNHNQLLSTGSGPGGVGVGVGPGGGHNYRYSPETTDYDSNCGDLDSL SGEMNGGVSTSCSNYAKYYASAMPVLEDGLSSGHTSDTENNNNNQKNNLQQAAAQGQQ GHQGQQGQPQCPTSLSGSTSIGGGISMLMDMKRVSTNNSLNSMHNLTTTASTTDSNGG VAGHHLVATPSPSNGQSKGQPQSNQPKTLSLDQSPSNNHSKVFKNIDPELDSLYSIGV FHRPDTVQMTPPPPAPAPHRKPNNNGNGNANSNAMVNSNGTGNNDVDLLQPSSKHTHT PLAAAISSTLQRSSPTLAASGNGNGMGIGIGSGKPRSAGSNCSSIGVPPPIPERSNLP NVAATQRSPSPGLNSPVWLSRKEGLLESGSDNNHSKNHSADEEDVDTDLETDRLLGHQ RLDDQGYYDENKSWDRKPRSLLSKISPKQQMPSTKTRNGYNALLSSTPELPPPIPPKG GMGNMGNGGKLLDLVGGMVQRSISRSSSEHSDKCSPSKLGMPLSISGGDVDVVASAVA AAAVAAASATSTAAEAALGSPGNGGGSERSTAGGGGGGLTNPGGAVKLVEPENAALNG GMTSGAGTGSGAGSGSGSGAANGTAVATTATANNNNNVGNSNSNNSSGSGAGSNSNSG EKKVKKSGAVLIEGVLFRAKYLGSTQLVCEGQPTKSTRMMQAEEAVSRIKAPDGDVQP STEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVPQDIDDA PKPNRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGIEDHRFVKEMDYQEVL NSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLMSSGA AARCGQLNIGDQLIAINGLSLVGLPLSTCQTYIKNTKNQTVVKFTVVPCAPVVEVKIK RPETKYQLGFSVQNGVICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLA TSVGEILMKTMPTSMFRLLTGQENPIYI" misc_feature 5509..5967 /gene="X11Lbeta" /note="X11-like Phosphotyrosine-binding (PTB) domain; Region: PTB_X11; cd01208" /db_xref="CDD:269919" misc_feature order(5542..5544,5776..5778,5875..5877) /gene="X11Lbeta" /note="putative phosphoinositide binding site [chemical binding]; other site" /db_xref="CDD:269919" misc_feature order(5596..5598,5743..5745,5752..5769,5899..5901, 5932..5934,5941..5943) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:269919" misc_feature 6064..6321 /gene="X11Lbeta" /note="PDZ domain 1 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ1_APBA1_3-like; cd06720" /db_xref="CDD:467203" misc_feature order(6097..6117,6157..6159,6166..6168,6256..6258, 6268..6270,6277..6282) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467203" misc_feature 6331..6564 /gene="X11Lbeta" /note="PDZ domain 2 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ2_APBA1_3-like; cd06793" /db_xref="CDD:467255" misc_feature order(6373..6393,6406..6408,6415..6417,6502..6504, 6514..6516,6523..6528) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467255" ORIGIN 1 ttccccagtt cgtttgatgc gttcgttcct tcgttcgttc gttcgttgtg tttgccaagt 61 tcaattttgt tgtactcgaa ttcccaactg gccaagaaac cagattgccg gaactcggaa 121 ttggcaagaa acaaaacaac agccaagcag acaagcaaac aagcaaacaa acagcaatat 181 aaatcgaaac cttaacccaa tctaaatata tatattcatc caaacctaaa gtgtgtctaa 241 tcacaaattc ttaatgtaaa attctcttta aactaaataa ttcaaacaca aatcacacaa 301 accgaaaacc aaaatctaaa ccaaacaatc gaatcgaatt gaatcgactc gaaatcgaaa 361 tcgcagaccc aggcaaaact cgcattgacc accaagcata tgagcttgtg gctaaaggtg 421 tctccggcat cgacttgttt catgttgtaa ctcgaggact ttcgtttatt ggcaacaata 481 atggtcagca caacattgac aacactggct gctggacaaa caactagtag cagtaatcac 541 catcaccacc accatcacca gcaggatcag ttgcagcagc agcaacatca gcagttgcag 601 cagcagcagc accagcagtt gccctaccag cgactgcagc cacacgcagc agcagcagcg 661 gcagctgtcg gccagcaacg cggcttctac gcactcaacg gcagcttgga gctggactgc 721 gacagcagca acagcaacag ctaccagcaa catcagcagc agcagcaaca gcagcagcaa 781 ccgccgttga tcctgtcgca ggctctgctg tcgccatcgc cgccgctcaa cgatcagatc 841 aacttgcttt tccccaagtg ccgacccaaa cagcagccgc aacagcagca gcagcagccg 901 cagcaacatc agacagcaca gcagcaacat gctcacctgg cggacgtgaa taccaacagc 961 aacagcagca gcaatcggag cagcagccca acaacagccg gtgaacggga gccgctggaa 1021 attgttggtg ccagtagtag tccaccgccg gccaaggcca cgcccaccag tacgcccagc 1081 tactacaaga gcgtgaacat cataacgcaa tcgccgccgc ctcactcggc ctcgtctcac 1141 tcctccgaat cgctttcctc ggtgacgccg cgcatctcca cgaatccctt cctctgcgca 1201 ccgctcacgc cgcccacacc gccgcaccac cagcagcagc agcagcagca gcaacaacag 1261 gaaacggagg ccaccggcga gtcagctgtg gagcggagca ggagcggagg agcggccggc 1321 gaggagcccg actatcccgc ctccttctac taccacacgg tgggcgagag taggcgtggt 1381 cccggcggct acgcggaaat gccgagaaaa cgcagcgctg ctttgccagc cagcaacagg 1441 cagcagcagc agcagcagca acagcagcaa caacagttgc tcaacggcaa tgggagtcag 1501 aatcctttca tcaaggagaa ctactgggag gcgccgccca caagagccag tttgctgctc 1561 cattcgccca cggagtactc cgaggagcag caacagcagc agcaacagca gcaacatata 1621 catgcttcgg ccagacgagc ttaccaccag cagcgggaac aggtgtacgg aatcagtcag 1681 cgggcacaac agcaacagca gcagcaacag ccgcacattt tgcgggtggg aagaagtccg 1741 gtgaatcgca gcttctccca gcagcaacag caacagattg ctgctgccag gagcaatccc 1801 tgcgccgatg gactgactcc gctggccagt cactatctgt atggcagcaa gtcatcactg 1861 gatcagcagc caggcgactg ggagccgcgg gagcagcgca aactgaggct gcgcgaggag 1921 cgggaaaggg aaagggagag ggagagagag cgagaaaggg agagggagca cctgttgctg 1981 gagcaacagc agcagctgca actacaggag gttcaggcgg ccagggagaa ccacctcagc 2041 catttggtgg gtcagcagca gcagcagcag cgcaagcgac atgtttacgg cgaggaacgg 2101 gatcgagaga gggaaagaga aagggaaagg gatcgagaac gggacttgga gcgggaccat 2161 cgcctggtca atggaaacgc agatcccaac gagagctggc agcagtacga aggctcgccc 2221 agacgcattg gagtgaccac cagtaatttg gggccagtga cggcggcatc aggggcatca 2281 gcgatagcag gagcagcgac accagcggac gaaagcgaac caccagcagc ggtagaagta 2341 gcaacaacac caccacaaca acaacaacag cagcagcagc aacaggtgcc catggccgcc 2401 gttccgccgc tgagctccac ggccacctcg ctgcagaaga cggcggcccg ggcagcactg 2461 gccgccctgg cccagagcca cccccacaac tcccacaaca tcctcagctc cctgctcccg 2521 aactcatcca acccgaaccc actgaacccc agccagatgc agatccactc gccgcagcag 2581 cccatgcaga actatcccgt tcgtccgggc tttccacagc gcatcatctc gccacccaat 2641 cgtgagcccc gcagcaactc gcctcctctg caacagcagc agcaacatca gcagcagcag 2701 caacatcagc agcaacaaca ctttgccagt ctgatgagca accacagcaa caactcgaac 2761 accaacaagc agccgctgag cagcgacaac aacgccgagg acaccagcaa cgatgtgtcc 2821 gagattggca ccatatccga cctgaccgct ccggaggcag tgggtctggg cctggccatt 2881 ggatccgccg ccggcgaggt ggccagccgg gcggccacgc cccctctttt ggcactcggg 2941 ccaccgacag cagtcgcggg cagctctgcc aacggaactg caacgggaaa cggaagcgga 3001 aatggaaacg gaaacggaac cgtaagcgga aatgcaacag cagcggccac cggactgggt 3061 ccactgagcc tgcacacaaa atcgtcgacc ttcgattacc tctacgagtt ctcggagacg 3121 cgcaaggtgc tggaggagtt cttcaagtgc ccctccaccg acgagcagcc cataatggaa 3181 aacggcagcg atgtggacag cattgacatc cagtacgagt tccacagcaa ctttgagcgc 3241 gacgacgagg atttggccga ggaggaggag gccgaggacg acgaggaggg cgacgacgat 3301 gccgacgagg agaacgacga ggccgaggat gaggacgagc cgttgggtca ggatcgcgac 3361 cagaactacc gccagcaggc gcctcccacc gccggccacg cctccgagcg actcgtctac 3421 ggcggctacg gtggccagca gtcgcagccc cagctgattt cccagcccct gggcgttggc 3481 atgggcgtgg gtgtgggcgt ggcacggcga cactacagcg gcagtccgct gatgcgggac 3541 ttcgacttct tcctggactc caccagtcgg agcagcggcg agcgggacgg cgaccaggac 3601 gggctcaatc acaaccagct gctgagcacg ggcagcggcc cagggggcgt gggagtgggc 3661 gtgggcccgg gcggtggcca caactaccgc tactcaccgg agaccaccga ctacgactcc 3721 aattgcggcg atctggacag tctctcgggt gagatgaacg gcggcgtgtc gacctcctgc 3781 tcgaactacg ccaagtacta cgcctcggcc atgccagtgc tggaggatgg gctctcctcg 3841 ggtcacacca gcgacacgga gaacaacaac aacaaccaga agaacaacct gcagcaggcg 3901 gcggcccaag ggcaacaggg tcatcagggt caacagggtc aaccgcagtg ccccaccagc 3961 ctgagcggaa gcaccagcat cggcggcggc atctccatgc tgatggacat gaagcgcgtc 4021 tcgacgaaca acagtttgaa cagcatgcac aacctgacca ccaccgcctc caccacggac 4081 agcaacgggg gcgtggccgg tcaccacctg gtggccacgc ccagtcccag caatgggcaa 4141 tcgaaggggc agccgcagag caaccagccg aagacactgt cactggacca gagtcccagc 4201 aacaaccaca gcaaagtgtt caagaacatt gatccggaat tggattcgct ctactcgatt 4261 ggagtcttcc accgtccgga cacggtgcag atgaccccac cgcctcctgc tccggcgccg 4321 catcgcaagc ccaacaacaa tggcaacggc aatgccaatt ccaatgccat ggtcaacagt 4381 aatggcaccg gcaacaacga tgtggatctg ctgcagccga gcagcaagca cactcacact 4441 ccgctggcgg cggccatcag ttccacgctg cagcgcagtt cacccacctt ggcggccagc 4501 ggaaacggaa atggaatggg aatcggaatc ggaagtggca agccccgaag cgccggcagc 4561 aattgcagca gcattggcgt gccgccgccc attccggaga ggagcaacct ccccaacgtc 4621 gccgccacgc agagatcacc gtcgccgggc ctcaactcac ccgtctggct gtcccgcaag 4681 gaggggctgc tggagtccgg ctccgataac aaccactcga agaaccacag cgccgacgag 4741 gaggacgtgg acaccgatct ggagacggac cgcctgctgg gccaccagcg gctggacgac 4801 cagggctact acgacgagaa caagagctgg gaccgcaagc cgcgctcgct gctctcgaag 4861 atctcgccca agcagcagat gccgagcacc aagacgcgca acggctacaa tgcgctgctc 4921 agctccacgc cggagctgcc gcccccgatt ccacctaagg gaggcatggg caacatgggc 4981 aacgggggca agctgctgga cttggtcggc ggcatggtgc agcgcagcat atcgcgcagc 5041 tcctcggagc actcggacaa gtgctcgccc agcaaattgg ggatgcccct ttccatttcc 5101 ggcggggatg tggatgtggt ggcctcggcg gtggcggcgg cggcggtggc ggcagcctct 5161 gccacatcga cggcggctga agcggcgctg ggaagtccgg ggaatggagg aggctcggag 5221 agatcgacgg cgggcggcgg cggcggcgga ctgaccaatc cgggaggagc ggtcaagttg 5281 gtggagccgg agaacgcagc cctcaacggg ggaatgactt ctggagcggg cacaggatcg 5341 ggagcaggat cgggatcagg atctggagcg gccaatggaa ccgcggtggc caccaccgcc 5401 accgccaaca acaacaacaa cgtcggcaac agcaacagca acaacagcag cggcagcggg 5461 gccggcagca acagcaacag cggcgagaaa aaagtgaaaa agagcggcgc agtgctcatc 5521 gagggcgttc tcttcagggc caagtacttg ggctccacgc agctggtctg cgaaggtcag 5581 cccacgaaat ccacgcggat gatgcaggcg gaggaagccg tttccaggat caaggcaccc 5641 gatggcgatg tgcagcccag caccgaggtg gatctgttta tttcgacgga gaagatcatg 5701 gtcctgaaca cggacctcaa ggagatcatg atggaccacg ccctgcgcac catctcctat 5761 atcgcggaca tcggggacct ggtcgtcctg atggcccgac gccgcttcgt tccccaggac 5821 atcgacgatg cccccaagcc gaatcgcacg cccaagatga tatgccatgt gttcgagagc 5881 gacgaggccc agtttatcgc ccagtcgatt ggccaggcct tccaggtggc ctacatggag 5941 ttcctcaagg ccaacggcat cgaggaccat cgcttcgtca aggagatgga ctaccaggag 6001 gtgctcaaca gccaggagat cttcggcgac gagctggaga tctttgccaa gaaggagctg 6061 cagaaggagg tggtcgtgcc gaaggccaag ggcgaaatcc tgggcgtggt catagtggag 6121 agtggctggg gctccatgct gccgaccgtc gtcattgcca atctgatgag ctcgggagca 6181 gccgcccggt gcgggcagct caacatcggc gaccagttga tagccatcaa tgggctgagc 6241 ctcgtgggac tgccgctctc cacctgccag acgtacatca agaacaccaa gaaccagacg 6301 gtggtcaagt tcacggtggt gccctgcgcc cccgtcgtcg aggtgaagat caagcggccg 6361 gagaccaagt accagctcgg gtttagcgtc cagaatggag tgatctgcag tctcctgcgc 6421 ggcggcatcg cggaacgggg tggtgttcgt gtgggccatc gcatcatcga gataaacaac 6481 cagagcgtgg tggctgtgcc tcacgagaag atcgttaact tgctggccac atccgtggga 6541 gagatactca tgaagacgat gcccacgtcc atgttccgcc tgctcactgg tcaggaaaat 6601 cccatatata tttaagccag cgggagaata ataaacggcg attattgtta actataaaaa 6661 cctaacaagg atattacgat atttagtata tatataccta ttcatataga aagcgaggaa 6721 aacagagaga gagagagtta atatatgtat gtatatgcgt gtgtacctat atatataaat 6781 atatatatat atatagatat atgctaaaca tatatattac acacgagtgt atcgagattt 6841 tttttgtgag taaactagac aaagttcgat cgaaggcgag ttaagagcag ctactacgac 6901 aaataagagg aagcgataac taacacacat ggcacgcctt tttgcaaagc ttagtaataa 6961 tagttaataa tgtgtgtgag atcgggccat cggccaggac atgcatatgc atataaacat 7021 gaaacaatat atatacacat atatatgaac acaatgacct ttttgcgaaa acgtccttag 7081 cttagttgaa cggcgacatt agtcagagaa tactgcagct agtaacagcc cccccaaata 7141 tgcttaccca tacttattgt aaaaaccaaa aataaaatcc aggaaacacg aaccgaagac 7201 ccaaacgaga ttcaagtcca cacaggaggc aggcagctct tttgatatag tatatatata 7261 atccacacac tatatagcac caccccaata tatttatata acaaaacaga gggcgcgaga 7321 atggatagct tgaaatggat ataagaatga aaataggaaa tggatatgga aatggaaatg 7381 gatattgtaa ctgcagcgtt tcgttttcta ctcgcaccca tagccgagaa ttttgatagt 7441 tatttaacgg atatagccag atcgtaatgt atgcaaagtg taaattgagg agcgctttac 7501 acccccacaa atacatacat attcccccat agaggattta gtttagcaga cacttacact 7561 cacactcact tagacgcttc gatttcaacc atcttcgtcc aaaaattgtg ctactactcg 7621 ttaaacaagt tgatagatat agagagagat tagagaagga taacaggagg gcaggagaga 7681 gagacggaga gaggaaggga aggccggcga agaaagagac agagttagac ctccgttatg 7741 agccataaga tttaaaagaa gacggagacg gggaacagac tcgaacagaa agagacggca 7801 acaggaacgg aaatagagac agaaataagg gcagacagag agggagaatt gcatttcttt 7861 gtgtgtatat gtatgtgtaa aatactcgct attggcccaa atgcaatcca cgaacagccg 7921 gcatcagcag tcactaagag aactattatt aactaccagt acgatttaat tatgtaacgg 7981 caacagggca tttgcttgat gtttgtgaat tgaacgactt ttcggcctca tttccgctgc 8041 ttggcacggg ccacgcccac gcccaccaaa aatccaagaa caaaaaccaa attaatatac 8101 aaaacaagaa cataaaacat taacaactgc ttcagcaaac caatgagatg acatgaaacc 8161 gaaacaaatg catacaagaa ctaatattta atgaattgtt tttttttttt tggtgtacat 8221 tatttatatg gaatgtgaaa ttgcataaca aatttaatga atatattgaa tatttattaa 8281 aacgggctaa ttgcatagaa attatataag aacgatcata acgatgatta tttgtaaagg 8341 cgaactaaac ccaagaaaac cgaaaacaga ataaataaat aaaagaatat ataatcacat 8401 gcataacaaa aatataaaac caaaaattga gcataataaa cagaaaa