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LOCUS XM_070218993 8660 bp mRNA linear INV 09-DEC-2024 variant X8, mRNA. ACCESSION XM_070218993 VERSION XM_070218993.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8660 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8660 /gene="X11Lbeta" /note="X11Lbeta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108060874" CDS 481..6828 /gene="X11Lbeta" /codon_start=1 /product="uncharacterized protein X11Lbeta isoform X2" /protein_id="XP_070075094.1" /db_xref="GeneID:108060874" /translation="MVSTTLTTLAAGQTTSSSNHHHHHHHQQDQLQQQQHQQLQQQQH QQLPYQRLQPHAAAAAAAVGQQRGFYALNGSLELDCDSSNSNSYQQHQQQQQQQQQPP LILSQALLSPSPPLNDQINLLFPKCRPKQQPQQQQQQPQQHQTAQQQHAHLADVNTNS NSSSNRSSSPTTAGEREPLEIVGASSSPPPAKATPTSTPSYYKSVNIITQSPPPHSAS SHSSESLSSVTPRISTNPFLCAPLTPPTPPHHQQQQQQQQQQETEATGESAVERSRSG GAAGEEPDYPASFYYHTVGESRRGPGGYAEMPRKRSAALPASNRQQQQQQQQQQQQLL NGNGSQNPFIKENYWEAPPTRASLLLHSPTEYSEEQQQQQQQQQHIHASARRAYHQQR EQVYGISQRAQQQQQQQQPHILRVGRSPVNRSFSQQQQQQIAAARSNPCADGLTPLAS HYLYGSKSSLDQQPGDWEPREQRKLRLREEREREREREREREREREHLLLEQQQQLQL QEVQAARENHLSHLVGQQQQQQRKRHVYGEERDRERERERERDRERDLERDHRLVNGN ADPNESWQHLRVTTETLAEVGKLADKVHPNLNLNLNPNPNPNQGQNTEVNVYREHKLD AWKLERNYTLAVESRHGIIEYEGSPRRIGVTTSNLGPVTAASGASAIAGAATPADESE PPAAVEVATTPPQQQQQQQQQQVPMAAVPPLSSTATSLQKTAARAALAALAQSHPHNS HNILSSLLPNSSNPNPLNPSQMQIHSPQQPMQNYPVRPGFPQRIISPPNREPRSNSPP LQQQQQHQQQQQHQQQQHFASLMSNHSNNSNTNKQPLSSDNNAEDTSNDVSEIGTISD LTAPEAVGLGLAIGSAAGEVASRAATPPLLALGPPTAVAGSSANGTATGNGSGNGNGN GTVSGNATAAATGLGPLSLHTKSSTFDYLYEFSETRKVLEEFFKCPSTDEQPIMENGS DVDSIDIQYEFHSNFERDDEDLAEEEEAEDDEEGDDDADEENDEAEDEDEPLGQDRDQ NYRQQAPPTAGHASERLVYGGYGGQQSQPQLISQPLGVGMGVGVGVARRHYSGSPLMR DFDFFLDSTSRSSGERDGDQDGLNHNQLLSTGSGPGGVGVGVGPGGGHNYRYSPETTD YDSNCGDLDSLSGEMNGGVSTSCSNYAKYYASAMPVLEDGLSSGHTSDTENNNNNQKN NLQQAAAQGQQGHQGQQGQPQCPTSLSGSTSIGGGISMLMDMKRVSTNNSLNSMHNLT TTASTTDSNGGVAGHHLVATPSPSNGQSKGQPQSNQPKTLSLDQSPSNNHSKVFKNID PELDSLYSIGVFHRPDTVQMTPPPPAPAPHRKPNNNGNGNANSNAMVNSNGTGNNDVD LLQPSSKHTHTPLAAAISSTLQRSSPTLAASGNGNGMGIGIGSGKPRSAGSNCSSIGV PPPIPERSNLPNVAATQRSPSPGLNSPVWLSRKEGLLESGSDNNHSKNHSADEEDVDT DLETDRLLGHQRLDDQGYYDENKSWDRKPRSLLSKISPKQQMPSTKTRNGYNALLSST PELPPPIPPKGGMGNMGNGGKLLDLVGGMVQRSISRSSSEHSDKCSPSKLGMPLSISG GDVDVVASAVAAAAVAAASATSTAAEAALGSPGNGGGSERSTAGGGGGGLTNPGGAVK LVEPENAALNGGMTSGAGTGSGAGSGSGSGAANGTAVATTATANNNNNVGNSNSNNSS GSGAGSNSNSGEKKVKKSKSKEVLIEGVLFRAKYLGSTQLVCEGQPTKSTRMMQAEEA VSRIKAPDGDVQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLM ARRRFVPQDIDDAPKPNRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGIED HRFVKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVVIVESGWGSML PTVVIANLMSSGAAARCGQLNIGDQLIAINGLSLVGLPLSTCQTYIKNTKNQTVVKFT VVPCAPVVEVKIKRPETKYQLGFSVQNGVICSLLRGGIAERGGVRVGHRIIEINNQSV VAVPHEKIVNLLATSVGEILMKTMPTSMFRLLTGQENPIYI" misc_feature 5728..6180 /gene="X11Lbeta" /note="X11-like Phosphotyrosine-binding (PTB) domain; Region: PTB_X11; cd01208" /db_xref="CDD:269919" misc_feature order(5755..5757,5989..5991,6088..6090) /gene="X11Lbeta" /note="putative phosphoinositide binding site [chemical binding]; other site" /db_xref="CDD:269919" misc_feature order(5809..5811,5956..5958,5965..5982,6112..6114, 6145..6147,6154..6156) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:269919" misc_feature 6277..6534 /gene="X11Lbeta" /note="PDZ domain 1 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ1_APBA1_3-like; cd06720" /db_xref="CDD:467203" misc_feature order(6310..6330,6370..6372,6379..6381,6469..6471, 6481..6483,6490..6495) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467203" misc_feature 6544..6777 /gene="X11Lbeta" /note="PDZ domain 2 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ2_APBA1_3-like; cd06793" /db_xref="CDD:467255" misc_feature order(6586..6606,6619..6621,6628..6630,6715..6717, 6727..6729,6736..6741) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467255" ORIGIN 1 ttccccagtt cgtttgatgc gttcgttcct tcgttcgttc gttcgttgtg tttgccaagt 61 tcaattttgt tgtactcgaa ttcccaactg gccaagaaac cagattgccg gaactcggaa 121 ttggcaagaa acaaaacaac agccaagcag acaagcaaac aagcaaacaa acagcaatat 181 aaatcgaaac cttaacccaa tctaaatata tatattcatc caaacctaaa gtgtgtctaa 241 tcacaaattc ttaatgtaaa attctcttta aactaaataa ttcaaacaca aatcacacaa 301 accgaaaacc aaaatctaaa ccaaacaatc gaatcgaatt gaatcgactc gaaatcgaaa 361 tcgcagaccc aggcaaaact cgcattgacc accaagcata tgagcttgtg gctaaaggtg 421 tctccggcat cgacttgttt catgttgtaa ctcgaggact ttcgtttatt ggcaacaata 481 atggtcagca caacattgac aacactggct gctggacaaa caactagtag cagtaatcac 541 catcaccacc accatcacca gcaggatcag ttgcagcagc agcaacatca gcagttgcag 601 cagcagcagc accagcagtt gccctaccag cgactgcagc cacacgcagc agcagcagcg 661 gcagctgtcg gccagcaacg cggcttctac gcactcaacg gcagcttgga gctggactgc 721 gacagcagca acagcaacag ctaccagcaa catcagcagc agcagcaaca gcagcagcaa 781 ccgccgttga tcctgtcgca ggctctgctg tcgccatcgc cgccgctcaa cgatcagatc 841 aacttgcttt tccccaagtg ccgacccaaa cagcagccgc aacagcagca gcagcagccg 901 cagcaacatc agacagcaca gcagcaacat gctcacctgg cggacgtgaa taccaacagc 961 aacagcagca gcaatcggag cagcagccca acaacagccg gtgaacggga gccgctggaa 1021 attgttggtg ccagtagtag tccaccgccg gccaaggcca cgcccaccag tacgcccagc 1081 tactacaaga gcgtgaacat cataacgcaa tcgccgccgc ctcactcggc ctcgtctcac 1141 tcctccgaat cgctttcctc ggtgacgccg cgcatctcca cgaatccctt cctctgcgca 1201 ccgctcacgc cgcccacacc gccgcaccac cagcagcagc agcagcagca gcaacaacag 1261 gaaacggagg ccaccggcga gtcagctgtg gagcggagca ggagcggagg agcggccggc 1321 gaggagcccg actatcccgc ctccttctac taccacacgg tgggcgagag taggcgtggt 1381 cccggcggct acgcggaaat gccgagaaaa cgcagcgctg ctttgccagc cagcaacagg 1441 cagcagcagc agcagcagca acagcagcaa caacagttgc tcaacggcaa tgggagtcag 1501 aatcctttca tcaaggagaa ctactgggag gcgccgccca caagagccag tttgctgctc 1561 cattcgccca cggagtactc cgaggagcag caacagcagc agcaacagca gcaacatata 1621 catgcttcgg ccagacgagc ttaccaccag cagcgggaac aggtgtacgg aatcagtcag 1681 cgggcacaac agcaacagca gcagcaacag ccgcacattt tgcgggtggg aagaagtccg 1741 gtgaatcgca gcttctccca gcagcaacag caacagattg ctgctgccag gagcaatccc 1801 tgcgccgatg gactgactcc gctggccagt cactatctgt atggcagcaa gtcatcactg 1861 gatcagcagc caggcgactg ggagccgcgg gagcagcgca aactgaggct gcgcgaggag 1921 cgggaaaggg aaagggagag ggagagagag cgagaaaggg agagggagca cctgttgctg 1981 gagcaacagc agcagctgca actacaggag gttcaggcgg ccagggagaa ccacctcagc 2041 catttggtgg gtcagcagca gcagcagcag cgcaagcgac atgtttacgg cgaggaacgg 2101 gatcgagaga gggaaagaga aagggaaagg gatcgagaac gggacttgga gcgggaccat 2161 cgcctggtca atggaaacgc agatcccaac gagagctggc agcatctgcg cgtaacgacc 2221 gaaactttgg cggaggtggg caagctggcg gataaggtcc accccaatct gaatctgaat 2281 ctgaatccga acccgaatcc gaaccaaggt cagaacacgg aggtcaatgt ctacagggag 2341 cacaagctgg acgcctggaa gctcgagcgc aactacacgc tggccgtgga gtcgcgccac 2401 ggcatcattg agtacgaagg ctcgcccaga cgcattggag tgaccaccag taatttgggg 2461 ccagtgacgg cggcatcagg ggcatcagcg atagcaggag cagcgacacc agcggacgaa 2521 agcgaaccac cagcagcggt agaagtagca acaacaccac cacaacaaca acaacagcag 2581 cagcagcaac aggtgcccat ggccgccgtt ccgccgctga gctccacggc cacctcgctg 2641 cagaagacgg cggcccgggc agcactggcc gccctggccc agagccaccc ccacaactcc 2701 cacaacatcc tcagctccct gctcccgaac tcatccaacc cgaacccact gaaccccagc 2761 cagatgcaga tccactcgcc gcagcagccc atgcagaact atcccgttcg tccgggcttt 2821 ccacagcgca tcatctcgcc acccaatcgt gagccccgca gcaactcgcc tcctctgcaa 2881 cagcagcagc aacatcagca gcagcagcaa catcagcagc aacaacactt tgccagtctg 2941 atgagcaacc acagcaacaa ctcgaacacc aacaagcagc cgctgagcag cgacaacaac 3001 gccgaggaca ccagcaacga tgtgtccgag attggcacca tatccgacct gaccgctccg 3061 gaggcagtgg gtctgggcct ggccattgga tccgccgccg gcgaggtggc cagccgggcg 3121 gccacgcccc ctcttttggc actcgggcca ccgacagcag tcgcgggcag ctctgccaac 3181 ggaactgcaa cgggaaacgg aagcggaaat ggaaacggaa acggaaccgt aagcggaaat 3241 gcaacagcag cggccaccgg actgggtcca ctgagcctgc acacaaaatc gtcgaccttc 3301 gattacctct acgagttctc ggagacgcgc aaggtgctgg aggagttctt caagtgcccc 3361 tccaccgacg agcagcccat aatggaaaac ggcagcgatg tggacagcat tgacatccag 3421 tacgagttcc acagcaactt tgagcgcgac gacgaggatt tggccgagga ggaggaggcc 3481 gaggacgacg aggagggcga cgacgatgcc gacgaggaga acgacgaggc cgaggatgag 3541 gacgagccgt tgggtcagga tcgcgaccag aactaccgcc agcaggcgcc tcccaccgcc 3601 ggccacgcct ccgagcgact cgtctacggc ggctacggtg gccagcagtc gcagccccag 3661 ctgatttccc agcccctggg cgttggcatg ggcgtgggtg tgggcgtggc acggcgacac 3721 tacagcggca gtccgctgat gcgggacttc gacttcttcc tggactccac cagtcggagc 3781 agcggcgagc gggacggcga ccaggacggg ctcaatcaca accagctgct gagcacgggc 3841 agcggcccag ggggcgtggg agtgggcgtg ggcccgggcg gtggccacaa ctaccgctac 3901 tcaccggaga ccaccgacta cgactccaat tgcggcgatc tggacagtct ctcgggtgag 3961 atgaacggcg gcgtgtcgac ctcctgctcg aactacgcca agtactacgc ctcggccatg 4021 ccagtgctgg aggatgggct ctcctcgggt cacaccagcg acacggagaa caacaacaac 4081 aaccagaaga acaacctgca gcaggcggcg gcccaagggc aacagggtca tcagggtcaa 4141 cagggtcaac cgcagtgccc caccagcctg agcggaagca ccagcatcgg cggcggcatc 4201 tccatgctga tggacatgaa gcgcgtctcg acgaacaaca gtttgaacag catgcacaac 4261 ctgaccacca ccgcctccac cacggacagc aacgggggcg tggccggtca ccacctggtg 4321 gccacgccca gtcccagcaa tgggcaatcg aaggggcagc cgcagagcaa ccagccgaag 4381 acactgtcac tggaccagag tcccagcaac aaccacagca aagtgttcaa gaacattgat 4441 ccggaattgg attcgctcta ctcgattgga gtcttccacc gtccggacac ggtgcagatg 4501 accccaccgc ctcctgctcc ggcgccgcat cgcaagccca acaacaatgg caacggcaat 4561 gccaattcca atgccatggt caacagtaat ggcaccggca acaacgatgt ggatctgctg 4621 cagccgagca gcaagcacac tcacactccg ctggcggcgg ccatcagttc cacgctgcag 4681 cgcagttcac ccaccttggc ggccagcgga aacggaaatg gaatgggaat cggaatcgga 4741 agtggcaagc cccgaagcgc cggcagcaat tgcagcagca ttggcgtgcc gccgcccatt 4801 ccggagagga gcaacctccc caacgtcgcc gccacgcaga gatcaccgtc gccgggcctc 4861 aactcacccg tctggctgtc ccgcaaggag gggctgctgg agtccggctc cgataacaac 4921 cactcgaaga accacagcgc cgacgaggag gacgtggaca ccgatctgga gacggaccgc 4981 ctgctgggcc accagcggct ggacgaccag ggctactacg acgagaacaa gagctgggac 5041 cgcaagccgc gctcgctgct ctcgaagatc tcgcccaagc agcagatgcc gagcaccaag 5101 acgcgcaacg gctacaatgc gctgctcagc tccacgccgg agctgccgcc cccgattcca 5161 cctaagggag gcatgggcaa catgggcaac gggggcaagc tgctggactt ggtcggcggc 5221 atggtgcagc gcagcatatc gcgcagctcc tcggagcact cggacaagtg ctcgcccagc 5281 aaattgggga tgcccctttc catttccggc ggggatgtgg atgtggtggc ctcggcggtg 5341 gcggcggcgg cggtggcggc agcctctgcc acatcgacgg cggctgaagc ggcgctggga 5401 agtccgggga atggaggagg ctcggagaga tcgacggcgg gcggcggcgg cggcggactg 5461 accaatccgg gaggagcggt caagttggtg gagccggaga acgcagccct caacggggga 5521 atgacttctg gagcgggcac aggatcggga gcaggatcgg gatcaggatc tggagcggcc 5581 aatggaaccg cggtggccac caccgccacc gccaacaaca acaacaacgt cggcaacagc 5641 aacagcaaca acagcagcgg cagcggggcc ggcagcaaca gcaacagcgg cgagaaaaaa 5701 gtgaaaaaga gtaagagcaa agaagtgctc atcgagggcg ttctcttcag ggccaagtac 5761 ttgggctcca cgcagctggt ctgcgaaggt cagcccacga aatccacgcg gatgatgcag 5821 gcggaggaag ccgtttccag gatcaaggca cccgatggcg atgtgcagcc cagcaccgag 5881 gtggatctgt ttatttcgac ggagaagatc atggtcctga acacggacct caaggagatc 5941 atgatggacc acgccctgcg caccatctcc tatatcgcgg acatcgggga cctggtcgtc 6001 ctgatggccc gacgccgctt cgttccccag gacatcgacg atgcccccaa gccgaatcgc 6061 acgcccaaga tgatatgcca tgtgttcgag agcgacgagg cccagtttat cgcccagtcg 6121 attggccagg ccttccaggt ggcctacatg gagttcctca aggccaacgg catcgaggac 6181 catcgcttcg tcaaggagat ggactaccag gaggtgctca acagccagga gatcttcggc 6241 gacgagctgg agatctttgc caagaaggag ctgcagaagg aggtggtcgt gccgaaggcc 6301 aagggcgaaa tcctgggcgt ggtcatagtg gagagtggct ggggctccat gctgccgacc 6361 gtcgtcattg ccaatctgat gagctcggga gcagccgccc ggtgcgggca gctcaacatc 6421 ggcgaccagt tgatagccat caatgggctg agcctcgtgg gactgccgct ctccacctgc 6481 cagacgtaca tcaagaacac caagaaccag acggtggtca agttcacggt ggtgccctgc 6541 gcccccgtcg tcgaggtgaa gatcaagcgg ccggagacca agtaccagct cgggtttagc 6601 gtccagaatg gagtgatctg cagtctcctg cgcggcggca tcgcggaacg gggtggtgtt 6661 cgtgtgggcc atcgcatcat cgagataaac aaccagagcg tggtggctgt gcctcacgag 6721 aagatcgtta acttgctggc cacatccgtg ggagagatac tcatgaagac gatgcccacg 6781 tccatgttcc gcctgctcac tggtcaggaa aatcccatat atatttaagc cagcgggaga 6841 ataataaacg gcgattattg ttaactataa aaacctaaca aggatattac gatatttagt 6901 atatatatac ctattcatat agaaagcgag gaaaacagag agagagagag ttaatatatg 6961 tatgtatatg cgtgtgtacc tatatatata aatatatata tatatataga tatatgctaa 7021 acatatatat tacacacgag tgtatcgaga ttttttttgt gagtaaacta gacaaagttc 7081 gatcgaaggc gagttaagag cagctactac gacaaataag aggaagcgat aactaacaca 7141 catggcacgc ctttttgcaa agcttagtaa taatagttaa taatgtgtgt gagatcgggc 7201 catcggccag gacatgcata tgcatataaa catgaaacaa tatatataca catatatatg 7261 aacacaatga cctttttgcg aaaacgtcct tagcttagtt gaacggcgac attagtcaga 7321 gaatactgca gctagtaaca gcccccccaa atatgcttac ccatacttat tgtaaaaacc 7381 aaaaataaaa tccaggaaac acgaaccgaa gacccaaacg agattcaagt ccacacagga 7441 ggcaggcagc tcttttgata tagtatatat ataatccaca cactatatag caccacccca 7501 atatatttat ataacaaaac agagggcgcg agaatggata gcttgaaatg gatataagaa 7561 tgaaaatagg aaatggatat ggaaatggaa atggatattg taactgcagc gtttcgtttt 7621 ctactcgcac ccatagccga gaattttgat agttatttaa cggatatagc cagatcgtaa 7681 tgtatgcaaa gtgtaaattg aggagcgctt tacaccccca caaatacata catattcccc 7741 catagaggat ttagtttagc agacacttac actcacactc acttagacgc ttcgatttca 7801 accatcttcg tccaaaaatt gtgctactac tcgttaaaca agttgataga tatagagaga 7861 gattagagaa ggataacagg agggcaggag agagagacgg agagaggaag ggaaggccgg 7921 cgaagaaaga gacagagtta gacctccgtt atgagccata agatttaaaa gaagacggag 7981 acggggaaca gactcgaaca gaaagagacg gcaacaggaa cggaaataga gacagaaata 8041 agggcagaca gagagggaga attgcatttc tttgtgtgta tatgtatgtg taaaatactc 8101 gctattggcc caaatgcaat ccacgaacag ccggcatcag cagtcactaa gagaactatt 8161 attaactacc agtacgattt aattatgtaa cggcaacagg gcatttgctt gatgtttgtg 8221 aattgaacga cttttcggcc tcatttccgc tgcttggcac gggccacgcc cacgcccacc 8281 aaaaatccaa gaacaaaaac caaattaata tacaaaacaa gaacataaaa cattaacaac 8341 tgcttcagca aaccaatgag atgacatgaa accgaaacaa atgcatacaa gaactaatat 8401 ttaatgaatt gttttttttt ttttggtgta cattatttat atggaatgtg aaattgcata 8461 acaaatttaa tgaatatatt gaatatttat taaaacgggc taattgcata gaaattatat 8521 aagaacgatc ataacgatga ttatttgtaa aggcgaacta aacccaagaa aaccgaaaac 8581 agaataaata aataaaagaa tatataatca catgcataac aaaaatataa aaccaaaaat 8641 tgagcataat aaacagaaaa