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LOCUS XM_070218992 8622 bp mRNA linear INV 09-DEC-2024 variant X7, mRNA. ACCESSION XM_070218992 VERSION XM_070218992.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8622 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8622 /gene="X11Lbeta" /note="X11Lbeta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108060874" CDS 434..6790 /gene="X11Lbeta" /codon_start=1 /product="uncharacterized protein X11Lbeta isoform X1" /protein_id="XP_070075093.1" /db_xref="GeneID:108060874" /translation="MVSTTLTTLAAGQTTSSSNHHHHHHHQQDQLQQQQHQQLQQQQH QQLPYQRLQPHAAAAAAAVGQQRGFYALNGSLELDCDSSNSNSYQQHQQQQQQQQQPP LILSQALLSPSPPLNDQINLLFPKCRPKQQPQQQQQQPQQHQTAQQQHAHLADVNTNS NSSSNRSSSPTTAGEREPLEIVGASSSPPPAKATPTSTPSYYKSVNIITQSPPPHSAS SHSSESLSSVTPRISTNPFLCAPLTPPTPPHHQQQQQQQQQQETEATGESAVERSRSG GAAGEEPDYPASFYYHTVGESRRGPGGYAEMPRKRSAALPASNRQQQQQQQQQQQQLL NGNGSQNPFIKENYWEAPPTRASLLLHSPTEYSEEQQQQQQQQQHIHASARRAYHQQR EQVYGISQRAQQQQQQQQPHILRVGRSPVNRSFSQQQQQQIAAARSNPCADGLTPLAS HYLYGSKSSLDQQPGDWEPREQRKLRLREEREREREREREREREREHLLLEQQQQLQL QEVQAARENHLSHLVGQQQQQQRKRHVYGEERDRERERERERDRERDLERDHRLVNGN ADPNESWQHLRVTTETLAEVGKLADKVHPNLNLNLNPNPNPNQGQNTEVNVYREHKLD AWKLERNYTLAVESRHGIIEYEGSPRRIGVTTSNLGPVTAASGASAIAGAATPADESE PPAAVEVATTPPQQQQQQQQQQVPMAAVPPLSSTATSLQKTAARAALAALAQSHPHNS HNILSSLLPNSSNPNPLNPSQMQIHSPQQPMQNYPVRPGFPQRIISPPNREPRSNSPP LQQQQQHQQQQQHQQQQHFASLMSNHSNNSNTNKQPLSSDNNAEDTSNDVSEIGTISD LTAPEAVGLGLAIGSAAGEVASRAATPPLLALGPPTAVAGSSANGTATGNGSGNGNGN GTVSGNATAAATGLGPLSLHTKSSTFDYLYEFSETRKVLEEFFKCPSTDEQPIMENGS DVDSIDIQYEFHSNFERDDEDLAEEEEAEDDEEGDDDADEENDEAEDEDEPLGQDRDQ NYRQQAPPTAGHASERLVYGGYGGQQSQPQLISQPLGVGMGVGVGVARRHYSGSPLMR DFDFFLDSTSRSSGERDGDQDGLNHNQLLSTGSGPGGVGVGVGPGGGHNYRYSPETTD YDSNCGDLDSLSGEMNGGVSTSCSNYAKYYASAMPVLEDGLSSGHTSDTENNNNNQKN NLQQAAAQGQQGHQGQQGQPQCPTSLSGSTSIGGGISMLMDMKRVSTNNSLNSMHNLT TTASTTDSNGGVAGHHLVATPSPSNGQSKGQPQSNQPKTLSLDQSPSNNHSKVFKNID PELDSLYSIGVFHRPDTVQMTPPPPAPAPHRKPNNNGNGNANSNAMVNSNGTGNNDVD LLQPSSKHTHTPLAAAISSTLQRSSPTLAASGNGNGMGIGIGSGKPRSAGSNCSSIGV PPPIPERSNLPNVAATQRSPSPGLNSPVWLSRKEGLLESGSDNNHSKNHSADEEDVDT DLETDRLLGHQRLDDQGYYDENKSWDRKPRSLLSKISPKQQMPSTKTRNGYNALLSST PELPPPIPPKGGMGNMGNGGKLLDLVGGMVQRSISRSSSEHSDKCSPSKLGMPLSISG GDVDVVASAVAAAAVAAASATSTAAEAALGSPGNGGGSERSTAGGGGGGLTNPGGAVK LVEPENAALNGGMTSGAGTGSGAGSGSGSGAANGTAVATTATANNNNNVGNSNSNNSS GSGAGSNSNSGEKKVKKSKSKEGGAVLIEGVLFRAKYLGSTQLVCEGQPTKSTRMMQA EEAVSRIKAPDGDVQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLV VLMARRRFVPQDIDDAPKPNRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANG IEDHRFVKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVVIVESGWG SMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGLSLVGLPLSTCQTYIKNTKNQTVV KFTVVPCAPVVEVKIKRPETKYQLGFSVQNGVICSLLRGGIAERGGVRVGHRIIEINN QSVVAVPHEKIVNLLATSVGEILMKTMPTSMFRLLTGQENPIYI" misc_feature 5684..6142 /gene="X11Lbeta" /note="X11-like Phosphotyrosine-binding (PTB) domain; Region: PTB_X11; cd01208" /db_xref="CDD:269919" misc_feature order(5717..5719,5951..5953,6050..6052) /gene="X11Lbeta" /note="putative phosphoinositide binding site [chemical binding]; other site" /db_xref="CDD:269919" misc_feature order(5771..5773,5918..5920,5927..5944,6074..6076, 6107..6109,6116..6118) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:269919" misc_feature 6239..6496 /gene="X11Lbeta" /note="PDZ domain 1 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ1_APBA1_3-like; cd06720" /db_xref="CDD:467203" misc_feature order(6272..6292,6332..6334,6341..6343,6431..6433, 6443..6445,6452..6457) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467203" misc_feature 6506..6739 /gene="X11Lbeta" /note="PDZ domain 2 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ2_APBA1_3-like; cd06793" /db_xref="CDD:467255" misc_feature order(6548..6568,6581..6583,6590..6592,6677..6679, 6689..6691,6698..6703) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467255" ORIGIN 1 ttccccagtt cgtttgatgc gttcgttcct tcgttcgttc gttcgttgtg tttgccaagt 61 tcaattttgt tgtactcgaa ttcccaactg gccaagaaac cagattgccg gaactcggaa 121 ttggcaagaa acaaaacaac agccaagcag acaagcaaac aagcaaacaa acagcaatat 181 aaatcgaaac cttaacccaa tctaaatata tatattcatc caaacctaaa gtgtgtctaa 241 tcacaaattc ttaatgtaaa attctcttta aactaaataa ttcaaacaca aatcacacaa 301 accgaaaacc aaaatctaaa ccaaacaatc gaatcgaatt gaatcgactc gaaatcgaaa 361 tcgcagaccc aggcaaaact cgcattgacc accaagcata tgagcttgtg gctaaagttt 421 attggcaaca ataatggtca gcacaacatt gacaacactg gctgctggac aaacaactag 481 tagcagtaat caccatcacc accaccatca ccagcaggat cagttgcagc agcagcaaca 541 tcagcagttg cagcagcagc agcaccagca gttgccctac cagcgactgc agccacacgc 601 agcagcagca gcggcagctg tcggccagca acgcggcttc tacgcactca acggcagctt 661 ggagctggac tgcgacagca gcaacagcaa cagctaccag caacatcagc agcagcagca 721 acagcagcag caaccgccgt tgatcctgtc gcaggctctg ctgtcgccat cgccgccgct 781 caacgatcag atcaacttgc ttttccccaa gtgccgaccc aaacagcagc cgcaacagca 841 gcagcagcag ccgcagcaac atcagacagc acagcagcaa catgctcacc tggcggacgt 901 gaataccaac agcaacagca gcagcaatcg gagcagcagc ccaacaacag ccggtgaacg 961 ggagccgctg gaaattgttg gtgccagtag tagtccaccg ccggccaagg ccacgcccac 1021 cagtacgccc agctactaca agagcgtgaa catcataacg caatcgccgc cgcctcactc 1081 ggcctcgtct cactcctccg aatcgctttc ctcggtgacg ccgcgcatct ccacgaatcc 1141 cttcctctgc gcaccgctca cgccgcccac accgccgcac caccagcagc agcagcagca 1201 gcagcaacaa caggaaacgg aggccaccgg cgagtcagct gtggagcgga gcaggagcgg 1261 aggagcggcc ggcgaggagc ccgactatcc cgcctccttc tactaccaca cggtgggcga 1321 gagtaggcgt ggtcccggcg gctacgcgga aatgccgaga aaacgcagcg ctgctttgcc 1381 agccagcaac aggcagcagc agcagcagca gcaacagcag caacaacagt tgctcaacgg 1441 caatgggagt cagaatcctt tcatcaagga gaactactgg gaggcgccgc ccacaagagc 1501 cagtttgctg ctccattcgc ccacggagta ctccgaggag cagcaacagc agcagcaaca 1561 gcagcaacat atacatgctt cggccagacg agcttaccac cagcagcggg aacaggtgta 1621 cggaatcagt cagcgggcac aacagcaaca gcagcagcaa cagccgcaca ttttgcgggt 1681 gggaagaagt ccggtgaatc gcagcttctc ccagcagcaa cagcaacaga ttgctgctgc 1741 caggagcaat ccctgcgccg atggactgac tccgctggcc agtcactatc tgtatggcag 1801 caagtcatca ctggatcagc agccaggcga ctgggagccg cgggagcagc gcaaactgag 1861 gctgcgcgag gagcgggaaa gggaaaggga gagggagaga gagcgagaaa gggagaggga 1921 gcacctgttg ctggagcaac agcagcagct gcaactacag gaggttcagg cggccaggga 1981 gaaccacctc agccatttgg tgggtcagca gcagcagcag cagcgcaagc gacatgttta 2041 cggcgaggaa cgggatcgag agagggaaag agaaagggaa agggatcgag aacgggactt 2101 ggagcgggac catcgcctgg tcaatggaaa cgcagatccc aacgagagct ggcagcatct 2161 gcgcgtaacg accgaaactt tggcggaggt gggcaagctg gcggataagg tccaccccaa 2221 tctgaatctg aatctgaatc cgaacccgaa tccgaaccaa ggtcagaaca cggaggtcaa 2281 tgtctacagg gagcacaagc tggacgcctg gaagctcgag cgcaactaca cgctggccgt 2341 ggagtcgcgc cacggcatca ttgagtacga aggctcgccc agacgcattg gagtgaccac 2401 cagtaatttg gggccagtga cggcggcatc aggggcatca gcgatagcag gagcagcgac 2461 accagcggac gaaagcgaac caccagcagc ggtagaagta gcaacaacac caccacaaca 2521 acaacaacag cagcagcagc aacaggtgcc catggccgcc gttccgccgc tgagctccac 2581 ggccacctcg ctgcagaaga cggcggcccg ggcagcactg gccgccctgg cccagagcca 2641 cccccacaac tcccacaaca tcctcagctc cctgctcccg aactcatcca acccgaaccc 2701 actgaacccc agccagatgc agatccactc gccgcagcag cccatgcaga actatcccgt 2761 tcgtccgggc tttccacagc gcatcatctc gccacccaat cgtgagcccc gcagcaactc 2821 gcctcctctg caacagcagc agcaacatca gcagcagcag caacatcagc agcaacaaca 2881 ctttgccagt ctgatgagca accacagcaa caactcgaac accaacaagc agccgctgag 2941 cagcgacaac aacgccgagg acaccagcaa cgatgtgtcc gagattggca ccatatccga 3001 cctgaccgct ccggaggcag tgggtctggg cctggccatt ggatccgccg ccggcgaggt 3061 ggccagccgg gcggccacgc cccctctttt ggcactcggg ccaccgacag cagtcgcggg 3121 cagctctgcc aacggaactg caacgggaaa cggaagcgga aatggaaacg gaaacggaac 3181 cgtaagcgga aatgcaacag cagcggccac cggactgggt ccactgagcc tgcacacaaa 3241 atcgtcgacc ttcgattacc tctacgagtt ctcggagacg cgcaaggtgc tggaggagtt 3301 cttcaagtgc ccctccaccg acgagcagcc cataatggaa aacggcagcg atgtggacag 3361 cattgacatc cagtacgagt tccacagcaa ctttgagcgc gacgacgagg atttggccga 3421 ggaggaggag gccgaggacg acgaggaggg cgacgacgat gccgacgagg agaacgacga 3481 ggccgaggat gaggacgagc cgttgggtca ggatcgcgac cagaactacc gccagcaggc 3541 gcctcccacc gccggccacg cctccgagcg actcgtctac ggcggctacg gtggccagca 3601 gtcgcagccc cagctgattt cccagcccct gggcgttggc atgggcgtgg gtgtgggcgt 3661 ggcacggcga cactacagcg gcagtccgct gatgcgggac ttcgacttct tcctggactc 3721 caccagtcgg agcagcggcg agcgggacgg cgaccaggac gggctcaatc acaaccagct 3781 gctgagcacg ggcagcggcc cagggggcgt gggagtgggc gtgggcccgg gcggtggcca 3841 caactaccgc tactcaccgg agaccaccga ctacgactcc aattgcggcg atctggacag 3901 tctctcgggt gagatgaacg gcggcgtgtc gacctcctgc tcgaactacg ccaagtacta 3961 cgcctcggcc atgccagtgc tggaggatgg gctctcctcg ggtcacacca gcgacacgga 4021 gaacaacaac aacaaccaga agaacaacct gcagcaggcg gcggcccaag ggcaacaggg 4081 tcatcagggt caacagggtc aaccgcagtg ccccaccagc ctgagcggaa gcaccagcat 4141 cggcggcggc atctccatgc tgatggacat gaagcgcgtc tcgacgaaca acagtttgaa 4201 cagcatgcac aacctgacca ccaccgcctc caccacggac agcaacgggg gcgtggccgg 4261 tcaccacctg gtggccacgc ccagtcccag caatgggcaa tcgaaggggc agccgcagag 4321 caaccagccg aagacactgt cactggacca gagtcccagc aacaaccaca gcaaagtgtt 4381 caagaacatt gatccggaat tggattcgct ctactcgatt ggagtcttcc accgtccgga 4441 cacggtgcag atgaccccac cgcctcctgc tccggcgccg catcgcaagc ccaacaacaa 4501 tggcaacggc aatgccaatt ccaatgccat ggtcaacagt aatggcaccg gcaacaacga 4561 tgtggatctg ctgcagccga gcagcaagca cactcacact ccgctggcgg cggccatcag 4621 ttccacgctg cagcgcagtt cacccacctt ggcggccagc ggaaacggaa atggaatggg 4681 aatcggaatc ggaagtggca agccccgaag cgccggcagc aattgcagca gcattggcgt 4741 gccgccgccc attccggaga ggagcaacct ccccaacgtc gccgccacgc agagatcacc 4801 gtcgccgggc ctcaactcac ccgtctggct gtcccgcaag gaggggctgc tggagtccgg 4861 ctccgataac aaccactcga agaaccacag cgccgacgag gaggacgtgg acaccgatct 4921 ggagacggac cgcctgctgg gccaccagcg gctggacgac cagggctact acgacgagaa 4981 caagagctgg gaccgcaagc cgcgctcgct gctctcgaag atctcgccca agcagcagat 5041 gccgagcacc aagacgcgca acggctacaa tgcgctgctc agctccacgc cggagctgcc 5101 gcccccgatt ccacctaagg gaggcatggg caacatgggc aacgggggca agctgctgga 5161 cttggtcggc ggcatggtgc agcgcagcat atcgcgcagc tcctcggagc actcggacaa 5221 gtgctcgccc agcaaattgg ggatgcccct ttccatttcc ggcggggatg tggatgtggt 5281 ggcctcggcg gtggcggcgg cggcggtggc ggcagcctct gccacatcga cggcggctga 5341 agcggcgctg ggaagtccgg ggaatggagg aggctcggag agatcgacgg cgggcggcgg 5401 cggcggcgga ctgaccaatc cgggaggagc ggtcaagttg gtggagccgg agaacgcagc 5461 cctcaacggg ggaatgactt ctggagcggg cacaggatcg ggagcaggat cgggatcagg 5521 atctggagcg gccaatggaa ccgcggtggc caccaccgcc accgccaaca acaacaacaa 5581 cgtcggcaac agcaacagca acaacagcag cggcagcggg gccggcagca acagcaacag 5641 cggcgagaaa aaagtgaaaa agagtaagag caaagaaggc ggcgcagtgc tcatcgaggg 5701 cgttctcttc agggccaagt acttgggctc cacgcagctg gtctgcgaag gtcagcccac 5761 gaaatccacg cggatgatgc aggcggagga agccgtttcc aggatcaagg cacccgatgg 5821 cgatgtgcag cccagcaccg aggtggatct gtttatttcg acggagaaga tcatggtcct 5881 gaacacggac ctcaaggaga tcatgatgga ccacgccctg cgcaccatct cctatatcgc 5941 ggacatcggg gacctggtcg tcctgatggc ccgacgccgc ttcgttcccc aggacatcga 6001 cgatgccccc aagccgaatc gcacgcccaa gatgatatgc catgtgttcg agagcgacga 6061 ggcccagttt atcgcccagt cgattggcca ggccttccag gtggcctaca tggagttcct 6121 caaggccaac ggcatcgagg accatcgctt cgtcaaggag atggactacc aggaggtgct 6181 caacagccag gagatcttcg gcgacgagct ggagatcttt gccaagaagg agctgcagaa 6241 ggaggtggtc gtgccgaagg ccaagggcga aatcctgggc gtggtcatag tggagagtgg 6301 ctggggctcc atgctgccga ccgtcgtcat tgccaatctg atgagctcgg gagcagccgc 6361 ccggtgcggg cagctcaaca tcggcgacca gttgatagcc atcaatgggc tgagcctcgt 6421 gggactgccg ctctccacct gccagacgta catcaagaac accaagaacc agacggtggt 6481 caagttcacg gtggtgccct gcgcccccgt cgtcgaggtg aagatcaagc ggccggagac 6541 caagtaccag ctcgggttta gcgtccagaa tggagtgatc tgcagtctcc tgcgcggcgg 6601 catcgcggaa cggggtggtg ttcgtgtggg ccatcgcatc atcgagataa acaaccagag 6661 cgtggtggct gtgcctcacg agaagatcgt taacttgctg gccacatccg tgggagagat 6721 actcatgaag acgatgccca cgtccatgtt ccgcctgctc actggtcagg aaaatcccat 6781 atatatttaa gccagcggga gaataataaa cggcgattat tgttaactat aaaaacctaa 6841 caaggatatt acgatattta gtatatatat acctattcat atagaaagcg aggaaaacag 6901 agagagagag agttaatata tgtatgtata tgcgtgtgta cctatatata taaatatata 6961 tatatatata gatatatgct aaacatatat attacacacg agtgtatcga gatttttttt 7021 gtgagtaaac tagacaaagt tcgatcgaag gcgagttaag agcagctact acgacaaata 7081 agaggaagcg ataactaaca cacatggcac gcctttttgc aaagcttagt aataatagtt 7141 aataatgtgt gtgagatcgg gccatcggcc aggacatgca tatgcatata aacatgaaac 7201 aatatatata cacatatata tgaacacaat gacctttttg cgaaaacgtc cttagcttag 7261 ttgaacggcg acattagtca gagaatactg cagctagtaa cagccccccc aaatatgctt 7321 acccatactt attgtaaaaa ccaaaaataa aatccaggaa acacgaaccg aagacccaaa 7381 cgagattcaa gtccacacag gaggcaggca gctcttttga tatagtatat atataatcca 7441 cacactatat agcaccaccc caatatattt atataacaaa acagagggcg cgagaatgga 7501 tagcttgaaa tggatataag aatgaaaata ggaaatggat atggaaatgg aaatggatat 7561 tgtaactgca gcgtttcgtt ttctactcgc acccatagcc gagaattttg atagttattt 7621 aacggatata gccagatcgt aatgtatgca aagtgtaaat tgaggagcgc tttacacccc 7681 cacaaataca tacatattcc cccatagagg atttagttta gcagacactt acactcacac 7741 tcacttagac gcttcgattt caaccatctt cgtccaaaaa ttgtgctact actcgttaaa 7801 caagttgata gatatagaga gagattagag aaggataaca ggagggcagg agagagagac 7861 ggagagagga agggaaggcc ggcgaagaaa gagacagagt tagacctccg ttatgagcca 7921 taagatttaa aagaagacgg agacggggaa cagactcgaa cagaaagaga cggcaacagg 7981 aacggaaata gagacagaaa taagggcaga cagagaggga gaattgcatt tctttgtgtg 8041 tatatgtatg tgtaaaatac tcgctattgg cccaaatgca atccacgaac agccggcatc 8101 agcagtcact aagagaacta ttattaacta ccagtacgat ttaattatgt aacggcaaca 8161 gggcatttgc ttgatgtttg tgaattgaac gacttttcgg cctcatttcc gctgcttggc 8221 acgggccacg cccacgccca ccaaaaatcc aagaacaaaa accaaattaa tatacaaaac 8281 aagaacataa aacattaaca actgcttcag caaaccaatg agatgacatg aaaccgaaac 8341 aaatgcatac aagaactaat atttaatgaa ttgttttttt ttttttggtg tacattattt 8401 atatggaatg tgaaattgca taacaaattt aatgaatata ttgaatattt attaaaacgg 8461 gctaattgca tagaaattat ataagaacga tcataacgat gattatttgt aaaggcgaac 8521 taaacccaag aaaaccgaaa acagaataaa taaataaaag aatatataat cacatgcata 8581 acaaaaatat aaaaccaaaa attgagcata ataaacagaa aa