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LOCUS XM_070218991 8783 bp mRNA linear INV 09-DEC-2024 variant X6, mRNA. ACCESSION XM_070218991 VERSION XM_070218991.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8783 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8783 /gene="X11Lbeta" /note="X11Lbeta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108060874" CDS 595..6951 /gene="X11Lbeta" /codon_start=1 /product="uncharacterized protein X11Lbeta isoform X1" /protein_id="XP_070075092.1" /db_xref="GeneID:108060874" /translation="MVSTTLTTLAAGQTTSSSNHHHHHHHQQDQLQQQQHQQLQQQQH QQLPYQRLQPHAAAAAAAVGQQRGFYALNGSLELDCDSSNSNSYQQHQQQQQQQQQPP LILSQALLSPSPPLNDQINLLFPKCRPKQQPQQQQQQPQQHQTAQQQHAHLADVNTNS NSSSNRSSSPTTAGEREPLEIVGASSSPPPAKATPTSTPSYYKSVNIITQSPPPHSAS SHSSESLSSVTPRISTNPFLCAPLTPPTPPHHQQQQQQQQQQETEATGESAVERSRSG GAAGEEPDYPASFYYHTVGESRRGPGGYAEMPRKRSAALPASNRQQQQQQQQQQQQLL NGNGSQNPFIKENYWEAPPTRASLLLHSPTEYSEEQQQQQQQQQHIHASARRAYHQQR EQVYGISQRAQQQQQQQQPHILRVGRSPVNRSFSQQQQQQIAAARSNPCADGLTPLAS HYLYGSKSSLDQQPGDWEPREQRKLRLREEREREREREREREREREHLLLEQQQQLQL QEVQAARENHLSHLVGQQQQQQRKRHVYGEERDRERERERERDRERDLERDHRLVNGN ADPNESWQHLRVTTETLAEVGKLADKVHPNLNLNLNPNPNPNQGQNTEVNVYREHKLD AWKLERNYTLAVESRHGIIEYEGSPRRIGVTTSNLGPVTAASGASAIAGAATPADESE PPAAVEVATTPPQQQQQQQQQQVPMAAVPPLSSTATSLQKTAARAALAALAQSHPHNS HNILSSLLPNSSNPNPLNPSQMQIHSPQQPMQNYPVRPGFPQRIISPPNREPRSNSPP LQQQQQHQQQQQHQQQQHFASLMSNHSNNSNTNKQPLSSDNNAEDTSNDVSEIGTISD LTAPEAVGLGLAIGSAAGEVASRAATPPLLALGPPTAVAGSSANGTATGNGSGNGNGN GTVSGNATAAATGLGPLSLHTKSSTFDYLYEFSETRKVLEEFFKCPSTDEQPIMENGS DVDSIDIQYEFHSNFERDDEDLAEEEEAEDDEEGDDDADEENDEAEDEDEPLGQDRDQ NYRQQAPPTAGHASERLVYGGYGGQQSQPQLISQPLGVGMGVGVGVARRHYSGSPLMR DFDFFLDSTSRSSGERDGDQDGLNHNQLLSTGSGPGGVGVGVGPGGGHNYRYSPETTD YDSNCGDLDSLSGEMNGGVSTSCSNYAKYYASAMPVLEDGLSSGHTSDTENNNNNQKN NLQQAAAQGQQGHQGQQGQPQCPTSLSGSTSIGGGISMLMDMKRVSTNNSLNSMHNLT TTASTTDSNGGVAGHHLVATPSPSNGQSKGQPQSNQPKTLSLDQSPSNNHSKVFKNID PELDSLYSIGVFHRPDTVQMTPPPPAPAPHRKPNNNGNGNANSNAMVNSNGTGNNDVD LLQPSSKHTHTPLAAAISSTLQRSSPTLAASGNGNGMGIGIGSGKPRSAGSNCSSIGV PPPIPERSNLPNVAATQRSPSPGLNSPVWLSRKEGLLESGSDNNHSKNHSADEEDVDT DLETDRLLGHQRLDDQGYYDENKSWDRKPRSLLSKISPKQQMPSTKTRNGYNALLSST PELPPPIPPKGGMGNMGNGGKLLDLVGGMVQRSISRSSSEHSDKCSPSKLGMPLSISG GDVDVVASAVAAAAVAAASATSTAAEAALGSPGNGGGSERSTAGGGGGGLTNPGGAVK LVEPENAALNGGMTSGAGTGSGAGSGSGSGAANGTAVATTATANNNNNVGNSNSNNSS GSGAGSNSNSGEKKVKKSKSKEGGAVLIEGVLFRAKYLGSTQLVCEGQPTKSTRMMQA EEAVSRIKAPDGDVQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLV VLMARRRFVPQDIDDAPKPNRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANG IEDHRFVKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVVIVESGWG SMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGLSLVGLPLSTCQTYIKNTKNQTVV KFTVVPCAPVVEVKIKRPETKYQLGFSVQNGVICSLLRGGIAERGGVRVGHRIIEINN QSVVAVPHEKIVNLLATSVGEILMKTMPTSMFRLLTGQENPIYI" misc_feature 5845..6303 /gene="X11Lbeta" /note="X11-like Phosphotyrosine-binding (PTB) domain; Region: PTB_X11; cd01208" /db_xref="CDD:269919" misc_feature order(5878..5880,6112..6114,6211..6213) /gene="X11Lbeta" /note="putative phosphoinositide binding site [chemical binding]; other site" /db_xref="CDD:269919" misc_feature order(5932..5934,6079..6081,6088..6105,6235..6237, 6268..6270,6277..6279) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:269919" misc_feature 6400..6657 /gene="X11Lbeta" /note="PDZ domain 1 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ1_APBA1_3-like; cd06720" /db_xref="CDD:467203" misc_feature order(6433..6453,6493..6495,6502..6504,6592..6594, 6604..6606,6613..6618) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467203" misc_feature 6667..6900 /gene="X11Lbeta" /note="PDZ domain 2 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ2_APBA1_3-like; cd06793" /db_xref="CDD:467255" misc_feature order(6709..6729,6742..6744,6751..6753,6838..6840, 6850..6852,6859..6864) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467255" ORIGIN 1 actcgcttac agttttgttc agtttgcctt taagttgtgc gttgtctgcg taaaagtaag 61 aaaataagaa cataaagctt atgagatggt taaatcagta aatgttgttg ccaaaaatag 121 aaaacaaaca aataggaagc aaagcaagcc aagacaataa gtgaactgag aactaagaac 181 tgagaaccaa gaaccgagaa ctgcgaaccg ctgaaaaacg ttgcacccac caccgcctca 241 cgctcaccgc ctcaccgctc gcccgctagt ttaaagctaa tgccaccgcc caccaccact 301 agaactacta cttccaccac aaccactagt accaccacaa ccaccaagaa ccaagaacca 361 agaaccatga accacaacca ccaactatca gcctcgacct gaaccacttc gcaacaaata 421 ccaaaacagt aatctaaaaa aaaaagaaag aaagaaaggc agagcccaga ttccagttac 481 cagttaccag attccgagtc cacttgtcca aaatgtcgtc aattgaaaaa tgtgtctccg 541 gcatcgactt gtttcatgtt gtaactcgag gactttcgtt tattggcaac aataatggtc 601 agcacaacat tgacaacact ggctgctgga caaacaacta gtagcagtaa tcaccatcac 661 caccaccatc accagcagga tcagttgcag cagcagcaac atcagcagtt gcagcagcag 721 cagcaccagc agttgcccta ccagcgactg cagccacacg cagcagcagc agcggcagct 781 gtcggccagc aacgcggctt ctacgcactc aacggcagct tggagctgga ctgcgacagc 841 agcaacagca acagctacca gcaacatcag cagcagcagc aacagcagca gcaaccgccg 901 ttgatcctgt cgcaggctct gctgtcgcca tcgccgccgc tcaacgatca gatcaacttg 961 cttttcccca agtgccgacc caaacagcag ccgcaacagc agcagcagca gccgcagcaa 1021 catcagacag cacagcagca acatgctcac ctggcggacg tgaataccaa cagcaacagc 1081 agcagcaatc ggagcagcag cccaacaaca gccggtgaac gggagccgct ggaaattgtt 1141 ggtgccagta gtagtccacc gccggccaag gccacgccca ccagtacgcc cagctactac 1201 aagagcgtga acatcataac gcaatcgccg ccgcctcact cggcctcgtc tcactcctcc 1261 gaatcgcttt cctcggtgac gccgcgcatc tccacgaatc ccttcctctg cgcaccgctc 1321 acgccgccca caccgccgca ccaccagcag cagcagcagc agcagcaaca acaggaaacg 1381 gaggccaccg gcgagtcagc tgtggagcgg agcaggagcg gaggagcggc cggcgaggag 1441 cccgactatc ccgcctcctt ctactaccac acggtgggcg agagtaggcg tggtcccggc 1501 ggctacgcgg aaatgccgag aaaacgcagc gctgctttgc cagccagcaa caggcagcag 1561 cagcagcagc agcaacagca gcaacaacag ttgctcaacg gcaatgggag tcagaatcct 1621 ttcatcaagg agaactactg ggaggcgccg cccacaagag ccagtttgct gctccattcg 1681 cccacggagt actccgagga gcagcaacag cagcagcaac agcagcaaca tatacatgct 1741 tcggccagac gagcttacca ccagcagcgg gaacaggtgt acggaatcag tcagcgggca 1801 caacagcaac agcagcagca acagccgcac attttgcggg tgggaagaag tccggtgaat 1861 cgcagcttct cccagcagca acagcaacag attgctgctg ccaggagcaa tccctgcgcc 1921 gatggactga ctccgctggc cagtcactat ctgtatggca gcaagtcatc actggatcag 1981 cagccaggcg actgggagcc gcgggagcag cgcaaactga ggctgcgcga ggagcgggaa 2041 agggaaaggg agagggagag agagcgagaa agggagaggg agcacctgtt gctggagcaa 2101 cagcagcagc tgcaactaca ggaggttcag gcggccaggg agaaccacct cagccatttg 2161 gtgggtcagc agcagcagca gcagcgcaag cgacatgttt acggcgagga acgggatcga 2221 gagagggaaa gagaaaggga aagggatcga gaacgggact tggagcggga ccatcgcctg 2281 gtcaatggaa acgcagatcc caacgagagc tggcagcatc tgcgcgtaac gaccgaaact 2341 ttggcggagg tgggcaagct ggcggataag gtccacccca atctgaatct gaatctgaat 2401 ccgaacccga atccgaacca aggtcagaac acggaggtca atgtctacag ggagcacaag 2461 ctggacgcct ggaagctcga gcgcaactac acgctggccg tggagtcgcg ccacggcatc 2521 attgagtacg aaggctcgcc cagacgcatt ggagtgacca ccagtaattt ggggccagtg 2581 acggcggcat caggggcatc agcgatagca ggagcagcga caccagcgga cgaaagcgaa 2641 ccaccagcag cggtagaagt agcaacaaca ccaccacaac aacaacaaca gcagcagcag 2701 caacaggtgc ccatggccgc cgttccgccg ctgagctcca cggccacctc gctgcagaag 2761 acggcggccc gggcagcact ggccgccctg gcccagagcc acccccacaa ctcccacaac 2821 atcctcagct ccctgctccc gaactcatcc aacccgaacc cactgaaccc cagccagatg 2881 cagatccact cgccgcagca gcccatgcag aactatcccg ttcgtccggg ctttccacag 2941 cgcatcatct cgccacccaa tcgtgagccc cgcagcaact cgcctcctct gcaacagcag 3001 cagcaacatc agcagcagca gcaacatcag cagcaacaac actttgccag tctgatgagc 3061 aaccacagca acaactcgaa caccaacaag cagccgctga gcagcgacaa caacgccgag 3121 gacaccagca acgatgtgtc cgagattggc accatatccg acctgaccgc tccggaggca 3181 gtgggtctgg gcctggccat tggatccgcc gccggcgagg tggccagccg ggcggccacg 3241 ccccctcttt tggcactcgg gccaccgaca gcagtcgcgg gcagctctgc caacggaact 3301 gcaacgggaa acggaagcgg aaatggaaac ggaaacggaa ccgtaagcgg aaatgcaaca 3361 gcagcggcca ccggactggg tccactgagc ctgcacacaa aatcgtcgac cttcgattac 3421 ctctacgagt tctcggagac gcgcaaggtg ctggaggagt tcttcaagtg cccctccacc 3481 gacgagcagc ccataatgga aaacggcagc gatgtggaca gcattgacat ccagtacgag 3541 ttccacagca actttgagcg cgacgacgag gatttggccg aggaggagga ggccgaggac 3601 gacgaggagg gcgacgacga tgccgacgag gagaacgacg aggccgagga tgaggacgag 3661 ccgttgggtc aggatcgcga ccagaactac cgccagcagg cgcctcccac cgccggccac 3721 gcctccgagc gactcgtcta cggcggctac ggtggccagc agtcgcagcc ccagctgatt 3781 tcccagcccc tgggcgttgg catgggcgtg ggtgtgggcg tggcacggcg acactacagc 3841 ggcagtccgc tgatgcggga cttcgacttc ttcctggact ccaccagtcg gagcagcggc 3901 gagcgggacg gcgaccagga cgggctcaat cacaaccagc tgctgagcac gggcagcggc 3961 ccagggggcg tgggagtggg cgtgggcccg ggcggtggcc acaactaccg ctactcaccg 4021 gagaccaccg actacgactc caattgcggc gatctggaca gtctctcggg tgagatgaac 4081 ggcggcgtgt cgacctcctg ctcgaactac gccaagtact acgcctcggc catgccagtg 4141 ctggaggatg ggctctcctc gggtcacacc agcgacacgg agaacaacaa caacaaccag 4201 aagaacaacc tgcagcaggc ggcggcccaa gggcaacagg gtcatcaggg tcaacagggt 4261 caaccgcagt gccccaccag cctgagcgga agcaccagca tcggcggcgg catctccatg 4321 ctgatggaca tgaagcgcgt ctcgacgaac aacagtttga acagcatgca caacctgacc 4381 accaccgcct ccaccacgga cagcaacggg ggcgtggccg gtcaccacct ggtggccacg 4441 cccagtccca gcaatgggca atcgaagggg cagccgcaga gcaaccagcc gaagacactg 4501 tcactggacc agagtcccag caacaaccac agcaaagtgt tcaagaacat tgatccggaa 4561 ttggattcgc tctactcgat tggagtcttc caccgtccgg acacggtgca gatgacccca 4621 ccgcctcctg ctccggcgcc gcatcgcaag cccaacaaca atggcaacgg caatgccaat 4681 tccaatgcca tggtcaacag taatggcacc ggcaacaacg atgtggatct gctgcagccg 4741 agcagcaagc acactcacac tccgctggcg gcggccatca gttccacgct gcagcgcagt 4801 tcacccacct tggcggccag cggaaacgga aatggaatgg gaatcggaat cggaagtggc 4861 aagccccgaa gcgccggcag caattgcagc agcattggcg tgccgccgcc cattccggag 4921 aggagcaacc tccccaacgt cgccgccacg cagagatcac cgtcgccggg cctcaactca 4981 cccgtctggc tgtcccgcaa ggaggggctg ctggagtccg gctccgataa caaccactcg 5041 aagaaccaca gcgccgacga ggaggacgtg gacaccgatc tggagacgga ccgcctgctg 5101 ggccaccagc ggctggacga ccagggctac tacgacgaga acaagagctg ggaccgcaag 5161 ccgcgctcgc tgctctcgaa gatctcgccc aagcagcaga tgccgagcac caagacgcgc 5221 aacggctaca atgcgctgct cagctccacg ccggagctgc cgcccccgat tccacctaag 5281 ggaggcatgg gcaacatggg caacgggggc aagctgctgg acttggtcgg cggcatggtg 5341 cagcgcagca tatcgcgcag ctcctcggag cactcggaca agtgctcgcc cagcaaattg 5401 gggatgcccc tttccatttc cggcggggat gtggatgtgg tggcctcggc ggtggcggcg 5461 gcggcggtgg cggcagcctc tgccacatcg acggcggctg aagcggcgct gggaagtccg 5521 gggaatggag gaggctcgga gagatcgacg gcgggcggcg gcggcggcgg actgaccaat 5581 ccgggaggag cggtcaagtt ggtggagccg gagaacgcag ccctcaacgg gggaatgact 5641 tctggagcgg gcacaggatc gggagcagga tcgggatcag gatctggagc ggccaatgga 5701 accgcggtgg ccaccaccgc caccgccaac aacaacaaca acgtcggcaa cagcaacagc 5761 aacaacagca gcggcagcgg ggccggcagc aacagcaaca gcggcgagaa aaaagtgaaa 5821 aagagtaaga gcaaagaagg cggcgcagtg ctcatcgagg gcgttctctt cagggccaag 5881 tacttgggct ccacgcagct ggtctgcgaa ggtcagccca cgaaatccac gcggatgatg 5941 caggcggagg aagccgtttc caggatcaag gcacccgatg gcgatgtgca gcccagcacc 6001 gaggtggatc tgtttatttc gacggagaag atcatggtcc tgaacacgga cctcaaggag 6061 atcatgatgg accacgccct gcgcaccatc tcctatatcg cggacatcgg ggacctggtc 6121 gtcctgatgg cccgacgccg cttcgttccc caggacatcg acgatgcccc caagccgaat 6181 cgcacgccca agatgatatg ccatgtgttc gagagcgacg aggcccagtt tatcgcccag 6241 tcgattggcc aggccttcca ggtggcctac atggagttcc tcaaggccaa cggcatcgag 6301 gaccatcgct tcgtcaagga gatggactac caggaggtgc tcaacagcca ggagatcttc 6361 ggcgacgagc tggagatctt tgccaagaag gagctgcaga aggaggtggt cgtgccgaag 6421 gccaagggcg aaatcctggg cgtggtcata gtggagagtg gctggggctc catgctgccg 6481 accgtcgtca ttgccaatct gatgagctcg ggagcagccg cccggtgcgg gcagctcaac 6541 atcggcgacc agttgatagc catcaatggg ctgagcctcg tgggactgcc gctctccacc 6601 tgccagacgt acatcaagaa caccaagaac cagacggtgg tcaagttcac ggtggtgccc 6661 tgcgcccccg tcgtcgaggt gaagatcaag cggccggaga ccaagtacca gctcgggttt 6721 agcgtccaga atggagtgat ctgcagtctc ctgcgcggcg gcatcgcgga acggggtggt 6781 gttcgtgtgg gccatcgcat catcgagata aacaaccaga gcgtggtggc tgtgcctcac 6841 gagaagatcg ttaacttgct ggccacatcc gtgggagaga tactcatgaa gacgatgccc 6901 acgtccatgt tccgcctgct cactggtcag gaaaatccca tatatattta agccagcggg 6961 agaataataa acggcgatta ttgttaacta taaaaaccta acaaggatat tacgatattt 7021 agtatatata tacctattca tatagaaagc gaggaaaaca gagagagaga gagttaatat 7081 atgtatgtat atgcgtgtgt acctatatat ataaatatat atatatatat agatatatgc 7141 taaacatata tattacacac gagtgtatcg agattttttt tgtgagtaaa ctagacaaag 7201 ttcgatcgaa ggcgagttaa gagcagctac tacgacaaat aagaggaagc gataactaac 7261 acacatggca cgcctttttg caaagcttag taataatagt taataatgtg tgtgagatcg 7321 ggccatcggc caggacatgc atatgcatat aaacatgaaa caatatatat acacatatat 7381 atgaacacaa tgaccttttt gcgaaaacgt ccttagctta gttgaacggc gacattagtc 7441 agagaatact gcagctagta acagcccccc caaatatgct tacccatact tattgtaaaa 7501 accaaaaata aaatccagga aacacgaacc gaagacccaa acgagattca agtccacaca 7561 ggaggcaggc agctcttttg atatagtata tatataatcc acacactata tagcaccacc 7621 ccaatatatt tatataacaa aacagagggc gcgagaatgg atagcttgaa atggatataa 7681 gaatgaaaat aggaaatgga tatggaaatg gaaatggata ttgtaactgc agcgtttcgt 7741 tttctactcg cacccatagc cgagaatttt gatagttatt taacggatat agccagatcg 7801 taatgtatgc aaagtgtaaa ttgaggagcg ctttacaccc ccacaaatac atacatattc 7861 ccccatagag gatttagttt agcagacact tacactcaca ctcacttaga cgcttcgatt 7921 tcaaccatct tcgtccaaaa attgtgctac tactcgttaa acaagttgat agatatagag 7981 agagattaga gaaggataac aggagggcag gagagagaga cggagagagg aagggaaggc 8041 cggcgaagaa agagacagag ttagacctcc gttatgagcc ataagattta aaagaagacg 8101 gagacgggga acagactcga acagaaagag acggcaacag gaacggaaat agagacagaa 8161 ataagggcag acagagaggg agaattgcat ttctttgtgt gtatatgtat gtgtaaaata 8221 ctcgctattg gcccaaatgc aatccacgaa cagccggcat cagcagtcac taagagaact 8281 attattaact accagtacga tttaattatg taacggcaac agggcatttg cttgatgttt 8341 gtgaattgaa cgacttttcg gcctcatttc cgctgcttgg cacgggccac gcccacgccc 8401 accaaaaatc caagaacaaa aaccaaatta atatacaaaa caagaacata aaacattaac 8461 aactgcttca gcaaaccaat gagatgacat gaaaccgaaa caaatgcata caagaactaa 8521 tatttaatga attgtttttt tttttttggt gtacattatt tatatggaat gtgaaattgc 8581 ataacaaatt taatgaatat attgaatatt tattaaaacg ggctaattgc atagaaatta 8641 tataagaacg atcataacga tgattatttg taaaggcgaa ctaaacccaa gaaaaccgaa 8701 aacagaataa ataaataaaa gaatatataa tcacatgcat aacaaaaata taaaaccaaa 8761 aattgagcat aataaacaga aaa