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LOCUS XM_070218990 8346 bp mRNA linear INV 09-DEC-2024 variant X5, mRNA. ACCESSION XM_070218990 VERSION XM_070218990.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8346 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8346 /gene="X11Lbeta" /note="X11Lbeta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108060874" CDS 158..6514 /gene="X11Lbeta" /codon_start=1 /product="uncharacterized protein X11Lbeta isoform X1" /protein_id="XP_070075091.1" /db_xref="GeneID:108060874" /translation="MVSTTLTTLAAGQTTSSSNHHHHHHHQQDQLQQQQHQQLQQQQH QQLPYQRLQPHAAAAAAAVGQQRGFYALNGSLELDCDSSNSNSYQQHQQQQQQQQQPP LILSQALLSPSPPLNDQINLLFPKCRPKQQPQQQQQQPQQHQTAQQQHAHLADVNTNS NSSSNRSSSPTTAGEREPLEIVGASSSPPPAKATPTSTPSYYKSVNIITQSPPPHSAS SHSSESLSSVTPRISTNPFLCAPLTPPTPPHHQQQQQQQQQQETEATGESAVERSRSG GAAGEEPDYPASFYYHTVGESRRGPGGYAEMPRKRSAALPASNRQQQQQQQQQQQQLL NGNGSQNPFIKENYWEAPPTRASLLLHSPTEYSEEQQQQQQQQQHIHASARRAYHQQR EQVYGISQRAQQQQQQQQPHILRVGRSPVNRSFSQQQQQQIAAARSNPCADGLTPLAS HYLYGSKSSLDQQPGDWEPREQRKLRLREEREREREREREREREREHLLLEQQQQLQL QEVQAARENHLSHLVGQQQQQQRKRHVYGEERDRERERERERDRERDLERDHRLVNGN ADPNESWQHLRVTTETLAEVGKLADKVHPNLNLNLNPNPNPNQGQNTEVNVYREHKLD AWKLERNYTLAVESRHGIIEYEGSPRRIGVTTSNLGPVTAASGASAIAGAATPADESE PPAAVEVATTPPQQQQQQQQQQVPMAAVPPLSSTATSLQKTAARAALAALAQSHPHNS HNILSSLLPNSSNPNPLNPSQMQIHSPQQPMQNYPVRPGFPQRIISPPNREPRSNSPP LQQQQQHQQQQQHQQQQHFASLMSNHSNNSNTNKQPLSSDNNAEDTSNDVSEIGTISD LTAPEAVGLGLAIGSAAGEVASRAATPPLLALGPPTAVAGSSANGTATGNGSGNGNGN GTVSGNATAAATGLGPLSLHTKSSTFDYLYEFSETRKVLEEFFKCPSTDEQPIMENGS DVDSIDIQYEFHSNFERDDEDLAEEEEAEDDEEGDDDADEENDEAEDEDEPLGQDRDQ NYRQQAPPTAGHASERLVYGGYGGQQSQPQLISQPLGVGMGVGVGVARRHYSGSPLMR DFDFFLDSTSRSSGERDGDQDGLNHNQLLSTGSGPGGVGVGVGPGGGHNYRYSPETTD YDSNCGDLDSLSGEMNGGVSTSCSNYAKYYASAMPVLEDGLSSGHTSDTENNNNNQKN NLQQAAAQGQQGHQGQQGQPQCPTSLSGSTSIGGGISMLMDMKRVSTNNSLNSMHNLT TTASTTDSNGGVAGHHLVATPSPSNGQSKGQPQSNQPKTLSLDQSPSNNHSKVFKNID PELDSLYSIGVFHRPDTVQMTPPPPAPAPHRKPNNNGNGNANSNAMVNSNGTGNNDVD LLQPSSKHTHTPLAAAISSTLQRSSPTLAASGNGNGMGIGIGSGKPRSAGSNCSSIGV PPPIPERSNLPNVAATQRSPSPGLNSPVWLSRKEGLLESGSDNNHSKNHSADEEDVDT DLETDRLLGHQRLDDQGYYDENKSWDRKPRSLLSKISPKQQMPSTKTRNGYNALLSST PELPPPIPPKGGMGNMGNGGKLLDLVGGMVQRSISRSSSEHSDKCSPSKLGMPLSISG GDVDVVASAVAAAAVAAASATSTAAEAALGSPGNGGGSERSTAGGGGGGLTNPGGAVK LVEPENAALNGGMTSGAGTGSGAGSGSGSGAANGTAVATTATANNNNNVGNSNSNNSS GSGAGSNSNSGEKKVKKSKSKEGGAVLIEGVLFRAKYLGSTQLVCEGQPTKSTRMMQA EEAVSRIKAPDGDVQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLV VLMARRRFVPQDIDDAPKPNRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANG IEDHRFVKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVVIVESGWG SMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGLSLVGLPLSTCQTYIKNTKNQTVV KFTVVPCAPVVEVKIKRPETKYQLGFSVQNGVICSLLRGGIAERGGVRVGHRIIEINN QSVVAVPHEKIVNLLATSVGEILMKTMPTSMFRLLTGQENPIYI" misc_feature 5408..5866 /gene="X11Lbeta" /note="X11-like Phosphotyrosine-binding (PTB) domain; Region: PTB_X11; cd01208" /db_xref="CDD:269919" misc_feature order(5441..5443,5675..5677,5774..5776) /gene="X11Lbeta" /note="putative phosphoinositide binding site [chemical binding]; other site" /db_xref="CDD:269919" misc_feature order(5495..5497,5642..5644,5651..5668,5798..5800, 5831..5833,5840..5842) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:269919" misc_feature 5963..6220 /gene="X11Lbeta" /note="PDZ domain 1 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ1_APBA1_3-like; cd06720" /db_xref="CDD:467203" misc_feature order(5996..6016,6056..6058,6065..6067,6155..6157, 6167..6169,6176..6181) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467203" misc_feature 6230..6463 /gene="X11Lbeta" /note="PDZ domain 2 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ2_APBA1_3-like; cd06793" /db_xref="CDD:467255" misc_feature order(6272..6292,6305..6307,6314..6316,6401..6403, 6413..6415,6422..6427) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467255" ORIGIN 1 atcccatctt caggaccccc ttcgcgatca acctggccca cccgcacgag taccgcgccc 61 tgtccaacat gcctgtcaat cggaccatcc gccagtgtct ccggcatcga cttgtttcat 121 gttgtaactc gaggactttc gtttattggc aacaataatg gtcagcacaa cattgacaac 181 actggctgct ggacaaacaa ctagtagcag taatcaccat caccaccacc atcaccagca 241 ggatcagttg cagcagcagc aacatcagca gttgcagcag cagcagcacc agcagttgcc 301 ctaccagcga ctgcagccac acgcagcagc agcagcggca gctgtcggcc agcaacgcgg 361 cttctacgca ctcaacggca gcttggagct ggactgcgac agcagcaaca gcaacagcta 421 ccagcaacat cagcagcagc agcaacagca gcagcaaccg ccgttgatcc tgtcgcaggc 481 tctgctgtcg ccatcgccgc cgctcaacga tcagatcaac ttgcttttcc ccaagtgccg 541 acccaaacag cagccgcaac agcagcagca gcagccgcag caacatcaga cagcacagca 601 gcaacatgct cacctggcgg acgtgaatac caacagcaac agcagcagca atcggagcag 661 cagcccaaca acagccggtg aacgggagcc gctggaaatt gttggtgcca gtagtagtcc 721 accgccggcc aaggccacgc ccaccagtac gcccagctac tacaagagcg tgaacatcat 781 aacgcaatcg ccgccgcctc actcggcctc gtctcactcc tccgaatcgc tttcctcggt 841 gacgccgcgc atctccacga atcccttcct ctgcgcaccg ctcacgccgc ccacaccgcc 901 gcaccaccag cagcagcagc agcagcagca acaacaggaa acggaggcca ccggcgagtc 961 agctgtggag cggagcagga gcggaggagc ggccggcgag gagcccgact atcccgcctc 1021 cttctactac cacacggtgg gcgagagtag gcgtggtccc ggcggctacg cggaaatgcc 1081 gagaaaacgc agcgctgctt tgccagccag caacaggcag cagcagcagc agcagcaaca 1141 gcagcaacaa cagttgctca acggcaatgg gagtcagaat cctttcatca aggagaacta 1201 ctgggaggcg ccgcccacaa gagccagttt gctgctccat tcgcccacgg agtactccga 1261 ggagcagcaa cagcagcagc aacagcagca acatatacat gcttcggcca gacgagctta 1321 ccaccagcag cgggaacagg tgtacggaat cagtcagcgg gcacaacagc aacagcagca 1381 gcaacagccg cacattttgc gggtgggaag aagtccggtg aatcgcagct tctcccagca 1441 gcaacagcaa cagattgctg ctgccaggag caatccctgc gccgatggac tgactccgct 1501 ggccagtcac tatctgtatg gcagcaagtc atcactggat cagcagccag gcgactggga 1561 gccgcgggag cagcgcaaac tgaggctgcg cgaggagcgg gaaagggaaa gggagaggga 1621 gagagagcga gaaagggaga gggagcacct gttgctggag caacagcagc agctgcaact 1681 acaggaggtt caggcggcca gggagaacca cctcagccat ttggtgggtc agcagcagca 1741 gcagcagcgc aagcgacatg tttacggcga ggaacgggat cgagagaggg aaagagaaag 1801 ggaaagggat cgagaacggg acttggagcg ggaccatcgc ctggtcaatg gaaacgcaga 1861 tcccaacgag agctggcagc atctgcgcgt aacgaccgaa actttggcgg aggtgggcaa 1921 gctggcggat aaggtccacc ccaatctgaa tctgaatctg aatccgaacc cgaatccgaa 1981 ccaaggtcag aacacggagg tcaatgtcta cagggagcac aagctggacg cctggaagct 2041 cgagcgcaac tacacgctgg ccgtggagtc gcgccacggc atcattgagt acgaaggctc 2101 gcccagacgc attggagtga ccaccagtaa tttggggcca gtgacggcgg catcaggggc 2161 atcagcgata gcaggagcag cgacaccagc ggacgaaagc gaaccaccag cagcggtaga 2221 agtagcaaca acaccaccac aacaacaaca acagcagcag cagcaacagg tgcccatggc 2281 cgccgttccg ccgctgagct ccacggccac ctcgctgcag aagacggcgg cccgggcagc 2341 actggccgcc ctggcccaga gccaccccca caactcccac aacatcctca gctccctgct 2401 cccgaactca tccaacccga acccactgaa ccccagccag atgcagatcc actcgccgca 2461 gcagcccatg cagaactatc ccgttcgtcc gggctttcca cagcgcatca tctcgccacc 2521 caatcgtgag ccccgcagca actcgcctcc tctgcaacag cagcagcaac atcagcagca 2581 gcagcaacat cagcagcaac aacactttgc cagtctgatg agcaaccaca gcaacaactc 2641 gaacaccaac aagcagccgc tgagcagcga caacaacgcc gaggacacca gcaacgatgt 2701 gtccgagatt ggcaccatat ccgacctgac cgctccggag gcagtgggtc tgggcctggc 2761 cattggatcc gccgccggcg aggtggccag ccgggcggcc acgccccctc ttttggcact 2821 cgggccaccg acagcagtcg cgggcagctc tgccaacgga actgcaacgg gaaacggaag 2881 cggaaatgga aacggaaacg gaaccgtaag cggaaatgca acagcagcgg ccaccggact 2941 gggtccactg agcctgcaca caaaatcgtc gaccttcgat tacctctacg agttctcgga 3001 gacgcgcaag gtgctggagg agttcttcaa gtgcccctcc accgacgagc agcccataat 3061 ggaaaacggc agcgatgtgg acagcattga catccagtac gagttccaca gcaactttga 3121 gcgcgacgac gaggatttgg ccgaggagga ggaggccgag gacgacgagg agggcgacga 3181 cgatgccgac gaggagaacg acgaggccga ggatgaggac gagccgttgg gtcaggatcg 3241 cgaccagaac taccgccagc aggcgcctcc caccgccggc cacgcctccg agcgactcgt 3301 ctacggcggc tacggtggcc agcagtcgca gccccagctg atttcccagc ccctgggcgt 3361 tggcatgggc gtgggtgtgg gcgtggcacg gcgacactac agcggcagtc cgctgatgcg 3421 ggacttcgac ttcttcctgg actccaccag tcggagcagc ggcgagcggg acggcgacca 3481 ggacgggctc aatcacaacc agctgctgag cacgggcagc ggcccagggg gcgtgggagt 3541 gggcgtgggc ccgggcggtg gccacaacta ccgctactca ccggagacca ccgactacga 3601 ctccaattgc ggcgatctgg acagtctctc gggtgagatg aacggcggcg tgtcgacctc 3661 ctgctcgaac tacgccaagt actacgcctc ggccatgcca gtgctggagg atgggctctc 3721 ctcgggtcac accagcgaca cggagaacaa caacaacaac cagaagaaca acctgcagca 3781 ggcggcggcc caagggcaac agggtcatca gggtcaacag ggtcaaccgc agtgccccac 3841 cagcctgagc ggaagcacca gcatcggcgg cggcatctcc atgctgatgg acatgaagcg 3901 cgtctcgacg aacaacagtt tgaacagcat gcacaacctg accaccaccg cctccaccac 3961 ggacagcaac gggggcgtgg ccggtcacca cctggtggcc acgcccagtc ccagcaatgg 4021 gcaatcgaag gggcagccgc agagcaacca gccgaagaca ctgtcactgg accagagtcc 4081 cagcaacaac cacagcaaag tgttcaagaa cattgatccg gaattggatt cgctctactc 4141 gattggagtc ttccaccgtc cggacacggt gcagatgacc ccaccgcctc ctgctccggc 4201 gccgcatcgc aagcccaaca acaatggcaa cggcaatgcc aattccaatg ccatggtcaa 4261 cagtaatggc accggcaaca acgatgtgga tctgctgcag ccgagcagca agcacactca 4321 cactccgctg gcggcggcca tcagttccac gctgcagcgc agttcaccca ccttggcggc 4381 cagcggaaac ggaaatggaa tgggaatcgg aatcggaagt ggcaagcccc gaagcgccgg 4441 cagcaattgc agcagcattg gcgtgccgcc gcccattccg gagaggagca acctccccaa 4501 cgtcgccgcc acgcagagat caccgtcgcc gggcctcaac tcacccgtct ggctgtcccg 4561 caaggagggg ctgctggagt ccggctccga taacaaccac tcgaagaacc acagcgccga 4621 cgaggaggac gtggacaccg atctggagac ggaccgcctg ctgggccacc agcggctgga 4681 cgaccagggc tactacgacg agaacaagag ctgggaccgc aagccgcgct cgctgctctc 4741 gaagatctcg cccaagcagc agatgccgag caccaagacg cgcaacggct acaatgcgct 4801 gctcagctcc acgccggagc tgccgccccc gattccacct aagggaggca tgggcaacat 4861 gggcaacggg ggcaagctgc tggacttggt cggcggcatg gtgcagcgca gcatatcgcg 4921 cagctcctcg gagcactcgg acaagtgctc gcccagcaaa ttggggatgc ccctttccat 4981 ttccggcggg gatgtggatg tggtggcctc ggcggtggcg gcggcggcgg tggcggcagc 5041 ctctgccaca tcgacggcgg ctgaagcggc gctgggaagt ccggggaatg gaggaggctc 5101 ggagagatcg acggcgggcg gcggcggcgg cggactgacc aatccgggag gagcggtcaa 5161 gttggtggag ccggagaacg cagccctcaa cgggggaatg acttctggag cgggcacagg 5221 atcgggagca ggatcgggat caggatctgg agcggccaat ggaaccgcgg tggccaccac 5281 cgccaccgcc aacaacaaca acaacgtcgg caacagcaac agcaacaaca gcagcggcag 5341 cggggccggc agcaacagca acagcggcga gaaaaaagtg aaaaagagta agagcaaaga 5401 aggcggcgca gtgctcatcg agggcgttct cttcagggcc aagtacttgg gctccacgca 5461 gctggtctgc gaaggtcagc ccacgaaatc cacgcggatg atgcaggcgg aggaagccgt 5521 ttccaggatc aaggcacccg atggcgatgt gcagcccagc accgaggtgg atctgtttat 5581 ttcgacggag aagatcatgg tcctgaacac ggacctcaag gagatcatga tggaccacgc 5641 cctgcgcacc atctcctata tcgcggacat cggggacctg gtcgtcctga tggcccgacg 5701 ccgcttcgtt ccccaggaca tcgacgatgc ccccaagccg aatcgcacgc ccaagatgat 5761 atgccatgtg ttcgagagcg acgaggccca gtttatcgcc cagtcgattg gccaggcctt 5821 ccaggtggcc tacatggagt tcctcaaggc caacggcatc gaggaccatc gcttcgtcaa 5881 ggagatggac taccaggagg tgctcaacag ccaggagatc ttcggcgacg agctggagat 5941 ctttgccaag aaggagctgc agaaggaggt ggtcgtgccg aaggccaagg gcgaaatcct 6001 gggcgtggtc atagtggaga gtggctgggg ctccatgctg ccgaccgtcg tcattgccaa 6061 tctgatgagc tcgggagcag ccgcccggtg cgggcagctc aacatcggcg accagttgat 6121 agccatcaat gggctgagcc tcgtgggact gccgctctcc acctgccaga cgtacatcaa 6181 gaacaccaag aaccagacgg tggtcaagtt cacggtggtg ccctgcgccc ccgtcgtcga 6241 ggtgaagatc aagcggccgg agaccaagta ccagctcggg tttagcgtcc agaatggagt 6301 gatctgcagt ctcctgcgcg gcggcatcgc ggaacggggt ggtgttcgtg tgggccatcg 6361 catcatcgag ataaacaacc agagcgtggt ggctgtgcct cacgagaaga tcgttaactt 6421 gctggccaca tccgtgggag agatactcat gaagacgatg cccacgtcca tgttccgcct 6481 gctcactggt caggaaaatc ccatatatat ttaagccagc gggagaataa taaacggcga 6541 ttattgttaa ctataaaaac ctaacaagga tattacgata tttagtatat atatacctat 6601 tcatatagaa agcgaggaaa acagagagag agagagttaa tatatgtatg tatatgcgtg 6661 tgtacctata tatataaata tatatatata tatagatata tgctaaacat atatattaca 6721 cacgagtgta tcgagatttt ttttgtgagt aaactagaca aagttcgatc gaaggcgagt 6781 taagagcagc tactacgaca aataagagga agcgataact aacacacatg gcacgccttt 6841 ttgcaaagct tagtaataat agttaataat gtgtgtgaga tcgggccatc ggccaggaca 6901 tgcatatgca tataaacatg aaacaatata tatacacata tatatgaaca caatgacctt 6961 tttgcgaaaa cgtccttagc ttagttgaac ggcgacatta gtcagagaat actgcagcta 7021 gtaacagccc ccccaaatat gcttacccat acttattgta aaaaccaaaa ataaaatcca 7081 ggaaacacga accgaagacc caaacgagat tcaagtccac acaggaggca ggcagctctt 7141 ttgatatagt atatatataa tccacacact atatagcacc accccaatat atttatataa 7201 caaaacagag ggcgcgagaa tggatagctt gaaatggata taagaatgaa aataggaaat 7261 ggatatggaa atggaaatgg atattgtaac tgcagcgttt cgttttctac tcgcacccat 7321 agccgagaat tttgatagtt atttaacgga tatagccaga tcgtaatgta tgcaaagtgt 7381 aaattgagga gcgctttaca cccccacaaa tacatacata ttcccccata gaggatttag 7441 tttagcagac acttacactc acactcactt agacgcttcg atttcaacca tcttcgtcca 7501 aaaattgtgc tactactcgt taaacaagtt gatagatata gagagagatt agagaaggat 7561 aacaggaggg caggagagag agacggagag aggaagggaa ggccggcgaa gaaagagaca 7621 gagttagacc tccgttatga gccataagat ttaaaagaag acggagacgg ggaacagact 7681 cgaacagaaa gagacggcaa caggaacgga aatagagaca gaaataaggg cagacagaga 7741 gggagaattg catttctttg tgtgtatatg tatgtgtaaa atactcgcta ttggcccaaa 7801 tgcaatccac gaacagccgg catcagcagt cactaagaga actattatta actaccagta 7861 cgatttaatt atgtaacggc aacagggcat ttgcttgatg tttgtgaatt gaacgacttt 7921 tcggcctcat ttccgctgct tggcacgggc cacgcccacg cccaccaaaa atccaagaac 7981 aaaaaccaaa ttaatataca aaacaagaac ataaaacatt aacaactgct tcagcaaacc 8041 aatgagatga catgaaaccg aaacaaatgc atacaagaac taatatttaa tgaattgttt 8101 tttttttttt ggtgtacatt atttatatgg aatgtgaaat tgcataacaa atttaatgaa 8161 tatattgaat atttattaaa acgggctaat tgcatagaaa ttatataaga acgatcataa 8221 cgatgattat ttgtaaaggc gaactaaacc caagaaaacc gaaaacagaa taaataaata 8281 aaagaatata taatcacatg cataacaaaa atataaaacc aaaaattgag cataataaac 8341 agaaaa