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LOCUS XM_070218989 8834 bp mRNA linear INV 09-DEC-2024 variant X4, mRNA. ACCESSION XM_070218989 VERSION XM_070218989.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8834 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8834 /gene="X11Lbeta" /note="X11Lbeta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108060874" CDS 646..7002 /gene="X11Lbeta" /codon_start=1 /product="uncharacterized protein X11Lbeta isoform X1" /protein_id="XP_070075090.1" /db_xref="GeneID:108060874" /translation="MVSTTLTTLAAGQTTSSSNHHHHHHHQQDQLQQQQHQQLQQQQH QQLPYQRLQPHAAAAAAAVGQQRGFYALNGSLELDCDSSNSNSYQQHQQQQQQQQQPP LILSQALLSPSPPLNDQINLLFPKCRPKQQPQQQQQQPQQHQTAQQQHAHLADVNTNS NSSSNRSSSPTTAGEREPLEIVGASSSPPPAKATPTSTPSYYKSVNIITQSPPPHSAS SHSSESLSSVTPRISTNPFLCAPLTPPTPPHHQQQQQQQQQQETEATGESAVERSRSG GAAGEEPDYPASFYYHTVGESRRGPGGYAEMPRKRSAALPASNRQQQQQQQQQQQQLL NGNGSQNPFIKENYWEAPPTRASLLLHSPTEYSEEQQQQQQQQQHIHASARRAYHQQR EQVYGISQRAQQQQQQQQPHILRVGRSPVNRSFSQQQQQQIAAARSNPCADGLTPLAS HYLYGSKSSLDQQPGDWEPREQRKLRLREEREREREREREREREREHLLLEQQQQLQL QEVQAARENHLSHLVGQQQQQQRKRHVYGEERDRERERERERDRERDLERDHRLVNGN ADPNESWQHLRVTTETLAEVGKLADKVHPNLNLNLNPNPNPNQGQNTEVNVYREHKLD AWKLERNYTLAVESRHGIIEYEGSPRRIGVTTSNLGPVTAASGASAIAGAATPADESE PPAAVEVATTPPQQQQQQQQQQVPMAAVPPLSSTATSLQKTAARAALAALAQSHPHNS HNILSSLLPNSSNPNPLNPSQMQIHSPQQPMQNYPVRPGFPQRIISPPNREPRSNSPP LQQQQQHQQQQQHQQQQHFASLMSNHSNNSNTNKQPLSSDNNAEDTSNDVSEIGTISD LTAPEAVGLGLAIGSAAGEVASRAATPPLLALGPPTAVAGSSANGTATGNGSGNGNGN GTVSGNATAAATGLGPLSLHTKSSTFDYLYEFSETRKVLEEFFKCPSTDEQPIMENGS DVDSIDIQYEFHSNFERDDEDLAEEEEAEDDEEGDDDADEENDEAEDEDEPLGQDRDQ NYRQQAPPTAGHASERLVYGGYGGQQSQPQLISQPLGVGMGVGVGVARRHYSGSPLMR DFDFFLDSTSRSSGERDGDQDGLNHNQLLSTGSGPGGVGVGVGPGGGHNYRYSPETTD YDSNCGDLDSLSGEMNGGVSTSCSNYAKYYASAMPVLEDGLSSGHTSDTENNNNNQKN NLQQAAAQGQQGHQGQQGQPQCPTSLSGSTSIGGGISMLMDMKRVSTNNSLNSMHNLT TTASTTDSNGGVAGHHLVATPSPSNGQSKGQPQSNQPKTLSLDQSPSNNHSKVFKNID PELDSLYSIGVFHRPDTVQMTPPPPAPAPHRKPNNNGNGNANSNAMVNSNGTGNNDVD LLQPSSKHTHTPLAAAISSTLQRSSPTLAASGNGNGMGIGIGSGKPRSAGSNCSSIGV PPPIPERSNLPNVAATQRSPSPGLNSPVWLSRKEGLLESGSDNNHSKNHSADEEDVDT DLETDRLLGHQRLDDQGYYDENKSWDRKPRSLLSKISPKQQMPSTKTRNGYNALLSST PELPPPIPPKGGMGNMGNGGKLLDLVGGMVQRSISRSSSEHSDKCSPSKLGMPLSISG GDVDVVASAVAAAAVAAASATSTAAEAALGSPGNGGGSERSTAGGGGGGLTNPGGAVK LVEPENAALNGGMTSGAGTGSGAGSGSGSGAANGTAVATTATANNNNNVGNSNSNNSS GSGAGSNSNSGEKKVKKSKSKEGGAVLIEGVLFRAKYLGSTQLVCEGQPTKSTRMMQA EEAVSRIKAPDGDVQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLV VLMARRRFVPQDIDDAPKPNRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANG IEDHRFVKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVVIVESGWG SMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGLSLVGLPLSTCQTYIKNTKNQTVV KFTVVPCAPVVEVKIKRPETKYQLGFSVQNGVICSLLRGGIAERGGVRVGHRIIEINN QSVVAVPHEKIVNLLATSVGEILMKTMPTSMFRLLTGQENPIYI" misc_feature 5896..6354 /gene="X11Lbeta" /note="X11-like Phosphotyrosine-binding (PTB) domain; Region: PTB_X11; cd01208" /db_xref="CDD:269919" misc_feature order(5929..5931,6163..6165,6262..6264) /gene="X11Lbeta" /note="putative phosphoinositide binding site [chemical binding]; other site" /db_xref="CDD:269919" misc_feature order(5983..5985,6130..6132,6139..6156,6286..6288, 6319..6321,6328..6330) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:269919" misc_feature 6451..6708 /gene="X11Lbeta" /note="PDZ domain 1 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ1_APBA1_3-like; cd06720" /db_xref="CDD:467203" misc_feature order(6484..6504,6544..6546,6553..6555,6643..6645, 6655..6657,6664..6669) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467203" misc_feature 6718..6951 /gene="X11Lbeta" /note="PDZ domain 2 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ2_APBA1_3-like; cd06793" /db_xref="CDD:467255" misc_feature order(6760..6780,6793..6795,6802..6804,6889..6891, 6901..6903,6910..6915) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467255" ORIGIN 1 actcgcttac agttttgttc agtttgcctt taagttgtgc gttgtctgcg taaaagtaag 61 aaaataagaa cataaagctt atgagatggt taaatcagta aatgttgttg ccaaaaatag 121 aaaacaaaca aataggaagc aaagcaagcc aagacaataa gtgaactgag aactaagaac 181 tgagaaccaa gaaccgagaa ctgcgaaccg ctgaaaaacg ttgcacccac caccgcctca 241 cgctcaccgc ctcaccgctc gcccgctagt ttaaagctaa tgccaccgcc caccaccact 301 agaactacta cttccaccac aaccactagt accaccacaa ccaccaagaa ccaagaacca 361 agaaccatga accacaacca ccaactatca gcctcgacct gaaccacttc gcaacaaata 421 ccaaaacagt aatctaaaaa aaaaagaaag aaagaaaggc agagcccaga ttccagttac 481 cagttaccag attccgagtc cacttgtcca aaatgtcgtc aattgaaaaa tacccaggca 541 aaactcgcat tgaccaccaa gcatatgagc ttgtggctaa aggtgtctcc ggcatcgact 601 tgtttcatgt tgtaactcga ggactttcgt ttattggcaa caataatggt cagcacaaca 661 ttgacaacac tggctgctgg acaaacaact agtagcagta atcaccatca ccaccaccat 721 caccagcagg atcagttgca gcagcagcaa catcagcagt tgcagcagca gcagcaccag 781 cagttgccct accagcgact gcagccacac gcagcagcag cagcggcagc tgtcggccag 841 caacgcggct tctacgcact caacggcagc ttggagctgg actgcgacag cagcaacagc 901 aacagctacc agcaacatca gcagcagcag caacagcagc agcaaccgcc gttgatcctg 961 tcgcaggctc tgctgtcgcc atcgccgccg ctcaacgatc agatcaactt gcttttcccc 1021 aagtgccgac ccaaacagca gccgcaacag cagcagcagc agccgcagca acatcagaca 1081 gcacagcagc aacatgctca cctggcggac gtgaatacca acagcaacag cagcagcaat 1141 cggagcagca gcccaacaac agccggtgaa cgggagccgc tggaaattgt tggtgccagt 1201 agtagtccac cgccggccaa ggccacgccc accagtacgc ccagctacta caagagcgtg 1261 aacatcataa cgcaatcgcc gccgcctcac tcggcctcgt ctcactcctc cgaatcgctt 1321 tcctcggtga cgccgcgcat ctccacgaat cccttcctct gcgcaccgct cacgccgccc 1381 acaccgccgc accaccagca gcagcagcag cagcagcaac aacaggaaac ggaggccacc 1441 ggcgagtcag ctgtggagcg gagcaggagc ggaggagcgg ccggcgagga gcccgactat 1501 cccgcctcct tctactacca cacggtgggc gagagtaggc gtggtcccgg cggctacgcg 1561 gaaatgccga gaaaacgcag cgctgctttg ccagccagca acaggcagca gcagcagcag 1621 cagcaacagc agcaacaaca gttgctcaac ggcaatggga gtcagaatcc tttcatcaag 1681 gagaactact gggaggcgcc gcccacaaga gccagtttgc tgctccattc gcccacggag 1741 tactccgagg agcagcaaca gcagcagcaa cagcagcaac atatacatgc ttcggccaga 1801 cgagcttacc accagcagcg ggaacaggtg tacggaatca gtcagcgggc acaacagcaa 1861 cagcagcagc aacagccgca cattttgcgg gtgggaagaa gtccggtgaa tcgcagcttc 1921 tcccagcagc aacagcaaca gattgctgct gccaggagca atccctgcgc cgatggactg 1981 actccgctgg ccagtcacta tctgtatggc agcaagtcat cactggatca gcagccaggc 2041 gactgggagc cgcgggagca gcgcaaactg aggctgcgcg aggagcggga aagggaaagg 2101 gagagggaga gagagcgaga aagggagagg gagcacctgt tgctggagca acagcagcag 2161 ctgcaactac aggaggttca ggcggccagg gagaaccacc tcagccattt ggtgggtcag 2221 cagcagcagc agcagcgcaa gcgacatgtt tacggcgagg aacgggatcg agagagggaa 2281 agagaaaggg aaagggatcg agaacgggac ttggagcggg accatcgcct ggtcaatgga 2341 aacgcagatc ccaacgagag ctggcagcat ctgcgcgtaa cgaccgaaac tttggcggag 2401 gtgggcaagc tggcggataa ggtccacccc aatctgaatc tgaatctgaa tccgaacccg 2461 aatccgaacc aaggtcagaa cacggaggtc aatgtctaca gggagcacaa gctggacgcc 2521 tggaagctcg agcgcaacta cacgctggcc gtggagtcgc gccacggcat cattgagtac 2581 gaaggctcgc ccagacgcat tggagtgacc accagtaatt tggggccagt gacggcggca 2641 tcaggggcat cagcgatagc aggagcagcg acaccagcgg acgaaagcga accaccagca 2701 gcggtagaag tagcaacaac accaccacaa caacaacaac agcagcagca gcaacaggtg 2761 cccatggccg ccgttccgcc gctgagctcc acggccacct cgctgcagaa gacggcggcc 2821 cgggcagcac tggccgccct ggcccagagc cacccccaca actcccacaa catcctcagc 2881 tccctgctcc cgaactcatc caacccgaac ccactgaacc ccagccagat gcagatccac 2941 tcgccgcagc agcccatgca gaactatccc gttcgtccgg gctttccaca gcgcatcatc 3001 tcgccaccca atcgtgagcc ccgcagcaac tcgcctcctc tgcaacagca gcagcaacat 3061 cagcagcagc agcaacatca gcagcaacaa cactttgcca gtctgatgag caaccacagc 3121 aacaactcga acaccaacaa gcagccgctg agcagcgaca acaacgccga ggacaccagc 3181 aacgatgtgt ccgagattgg caccatatcc gacctgaccg ctccggaggc agtgggtctg 3241 ggcctggcca ttggatccgc cgccggcgag gtggccagcc gggcggccac gccccctctt 3301 ttggcactcg ggccaccgac agcagtcgcg ggcagctctg ccaacggaac tgcaacggga 3361 aacggaagcg gaaatggaaa cggaaacgga accgtaagcg gaaatgcaac agcagcggcc 3421 accggactgg gtccactgag cctgcacaca aaatcgtcga ccttcgatta cctctacgag 3481 ttctcggaga cgcgcaaggt gctggaggag ttcttcaagt gcccctccac cgacgagcag 3541 cccataatgg aaaacggcag cgatgtggac agcattgaca tccagtacga gttccacagc 3601 aactttgagc gcgacgacga ggatttggcc gaggaggagg aggccgagga cgacgaggag 3661 ggcgacgacg atgccgacga ggagaacgac gaggccgagg atgaggacga gccgttgggt 3721 caggatcgcg accagaacta ccgccagcag gcgcctccca ccgccggcca cgcctccgag 3781 cgactcgtct acggcggcta cggtggccag cagtcgcagc cccagctgat ttcccagccc 3841 ctgggcgttg gcatgggcgt gggtgtgggc gtggcacggc gacactacag cggcagtccg 3901 ctgatgcggg acttcgactt cttcctggac tccaccagtc ggagcagcgg cgagcgggac 3961 ggcgaccagg acgggctcaa tcacaaccag ctgctgagca cgggcagcgg cccagggggc 4021 gtgggagtgg gcgtgggccc gggcggtggc cacaactacc gctactcacc ggagaccacc 4081 gactacgact ccaattgcgg cgatctggac agtctctcgg gtgagatgaa cggcggcgtg 4141 tcgacctcct gctcgaacta cgccaagtac tacgcctcgg ccatgccagt gctggaggat 4201 gggctctcct cgggtcacac cagcgacacg gagaacaaca acaacaacca gaagaacaac 4261 ctgcagcagg cggcggccca agggcaacag ggtcatcagg gtcaacaggg tcaaccgcag 4321 tgccccacca gcctgagcgg aagcaccagc atcggcggcg gcatctccat gctgatggac 4381 atgaagcgcg tctcgacgaa caacagtttg aacagcatgc acaacctgac caccaccgcc 4441 tccaccacgg acagcaacgg gggcgtggcc ggtcaccacc tggtggccac gcccagtccc 4501 agcaatgggc aatcgaaggg gcagccgcag agcaaccagc cgaagacact gtcactggac 4561 cagagtccca gcaacaacca cagcaaagtg ttcaagaaca ttgatccgga attggattcg 4621 ctctactcga ttggagtctt ccaccgtccg gacacggtgc agatgacccc accgcctcct 4681 gctccggcgc cgcatcgcaa gcccaacaac aatggcaacg gcaatgccaa ttccaatgcc 4741 atggtcaaca gtaatggcac cggcaacaac gatgtggatc tgctgcagcc gagcagcaag 4801 cacactcaca ctccgctggc ggcggccatc agttccacgc tgcagcgcag ttcacccacc 4861 ttggcggcca gcggaaacgg aaatggaatg ggaatcggaa tcggaagtgg caagccccga 4921 agcgccggca gcaattgcag cagcattggc gtgccgccgc ccattccgga gaggagcaac 4981 ctccccaacg tcgccgccac gcagagatca ccgtcgccgg gcctcaactc acccgtctgg 5041 ctgtcccgca aggaggggct gctggagtcc ggctccgata acaaccactc gaagaaccac 5101 agcgccgacg aggaggacgt ggacaccgat ctggagacgg accgcctgct gggccaccag 5161 cggctggacg accagggcta ctacgacgag aacaagagct gggaccgcaa gccgcgctcg 5221 ctgctctcga agatctcgcc caagcagcag atgccgagca ccaagacgcg caacggctac 5281 aatgcgctgc tcagctccac gccggagctg ccgcccccga ttccacctaa gggaggcatg 5341 ggcaacatgg gcaacggggg caagctgctg gacttggtcg gcggcatggt gcagcgcagc 5401 atatcgcgca gctcctcgga gcactcggac aagtgctcgc ccagcaaatt ggggatgccc 5461 ctttccattt ccggcgggga tgtggatgtg gtggcctcgg cggtggcggc ggcggcggtg 5521 gcggcagcct ctgccacatc gacggcggct gaagcggcgc tgggaagtcc ggggaatgga 5581 ggaggctcgg agagatcgac ggcgggcggc ggcggcggcg gactgaccaa tccgggagga 5641 gcggtcaagt tggtggagcc ggagaacgca gccctcaacg ggggaatgac ttctggagcg 5701 ggcacaggat cgggagcagg atcgggatca ggatctggag cggccaatgg aaccgcggtg 5761 gccaccaccg ccaccgccaa caacaacaac aacgtcggca acagcaacag caacaacagc 5821 agcggcagcg gggccggcag caacagcaac agcggcgaga aaaaagtgaa aaagagtaag 5881 agcaaagaag gcggcgcagt gctcatcgag ggcgttctct tcagggccaa gtacttgggc 5941 tccacgcagc tggtctgcga aggtcagccc acgaaatcca cgcggatgat gcaggcggag 6001 gaagccgttt ccaggatcaa ggcacccgat ggcgatgtgc agcccagcac cgaggtggat 6061 ctgtttattt cgacggagaa gatcatggtc ctgaacacgg acctcaagga gatcatgatg 6121 gaccacgccc tgcgcaccat ctcctatatc gcggacatcg gggacctggt cgtcctgatg 6181 gcccgacgcc gcttcgttcc ccaggacatc gacgatgccc ccaagccgaa tcgcacgccc 6241 aagatgatat gccatgtgtt cgagagcgac gaggcccagt ttatcgccca gtcgattggc 6301 caggccttcc aggtggccta catggagttc ctcaaggcca acggcatcga ggaccatcgc 6361 ttcgtcaagg agatggacta ccaggaggtg ctcaacagcc aggagatctt cggcgacgag 6421 ctggagatct ttgccaagaa ggagctgcag aaggaggtgg tcgtgccgaa ggccaagggc 6481 gaaatcctgg gcgtggtcat agtggagagt ggctggggct ccatgctgcc gaccgtcgtc 6541 attgccaatc tgatgagctc gggagcagcc gcccggtgcg ggcagctcaa catcggcgac 6601 cagttgatag ccatcaatgg gctgagcctc gtgggactgc cgctctccac ctgccagacg 6661 tacatcaaga acaccaagaa ccagacggtg gtcaagttca cggtggtgcc ctgcgccccc 6721 gtcgtcgagg tgaagatcaa gcggccggag accaagtacc agctcgggtt tagcgtccag 6781 aatggagtga tctgcagtct cctgcgcggc ggcatcgcgg aacggggtgg tgttcgtgtg 6841 ggccatcgca tcatcgagat aaacaaccag agcgtggtgg ctgtgcctca cgagaagatc 6901 gttaacttgc tggccacatc cgtgggagag atactcatga agacgatgcc cacgtccatg 6961 ttccgcctgc tcactggtca ggaaaatccc atatatattt aagccagcgg gagaataata 7021 aacggcgatt attgttaact ataaaaacct aacaaggata ttacgatatt tagtatatat 7081 atacctattc atatagaaag cgaggaaaac agagagagag agagttaata tatgtatgta 7141 tatgcgtgtg tacctatata tataaatata tatatatata tagatatatg ctaaacatat 7201 atattacaca cgagtgtatc gagatttttt ttgtgagtaa actagacaaa gttcgatcga 7261 aggcgagtta agagcagcta ctacgacaaa taagaggaag cgataactaa cacacatggc 7321 acgccttttt gcaaagctta gtaataatag ttaataatgt gtgtgagatc gggccatcgg 7381 ccaggacatg catatgcata taaacatgaa acaatatata tacacatata tatgaacaca 7441 atgacctttt tgcgaaaacg tccttagctt agttgaacgg cgacattagt cagagaatac 7501 tgcagctagt aacagccccc ccaaatatgc ttacccatac ttattgtaaa aaccaaaaat 7561 aaaatccagg aaacacgaac cgaagaccca aacgagattc aagtccacac aggaggcagg 7621 cagctctttt gatatagtat atatataatc cacacactat atagcaccac cccaatatat 7681 ttatataaca aaacagaggg cgcgagaatg gatagcttga aatggatata agaatgaaaa 7741 taggaaatgg atatggaaat ggaaatggat attgtaactg cagcgtttcg ttttctactc 7801 gcacccatag ccgagaattt tgatagttat ttaacggata tagccagatc gtaatgtatg 7861 caaagtgtaa attgaggagc gctttacacc cccacaaata catacatatt cccccataga 7921 ggatttagtt tagcagacac ttacactcac actcacttag acgcttcgat ttcaaccatc 7981 ttcgtccaaa aattgtgcta ctactcgtta aacaagttga tagatataga gagagattag 8041 agaaggataa caggagggca ggagagagag acggagagag gaagggaagg ccggcgaaga 8101 aagagacaga gttagacctc cgttatgagc cataagattt aaaagaagac ggagacgggg 8161 aacagactcg aacagaaaga gacggcaaca ggaacggaaa tagagacaga aataagggca 8221 gacagagagg gagaattgca tttctttgtg tgtatatgta tgtgtaaaat actcgctatt 8281 ggcccaaatg caatccacga acagccggca tcagcagtca ctaagagaac tattattaac 8341 taccagtacg atttaattat gtaacggcaa cagggcattt gcttgatgtt tgtgaattga 8401 acgacttttc ggcctcattt ccgctgcttg gcacgggcca cgcccacgcc caccaaaaat 8461 ccaagaacaa aaaccaaatt aatatacaaa acaagaacat aaaacattaa caactgcttc 8521 agcaaaccaa tgagatgaca tgaaaccgaa acaaatgcat acaagaacta atatttaatg 8581 aattgttttt ttttttttgg tgtacattat ttatatggaa tgtgaaattg cataacaaat 8641 ttaatgaata tattgaatat ttattaaaac gggctaattg catagaaatt atataagaac 8701 gatcataacg atgattattt gtaaaggcga actaaaccca agaaaaccga aaacagaata 8761 aataaataaa agaatatata atcacatgca taacaaaaat ataaaaccaa aaattgagca 8821 taataaacag aaaa