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LOCUS XM_070218988 8523 bp mRNA linear INV 09-DEC-2024 variant X3, mRNA. ACCESSION XM_070218988 VERSION XM_070218988.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8523 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8523 /gene="X11Lbeta" /note="X11Lbeta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108060874" CDS 335..6691 /gene="X11Lbeta" /codon_start=1 /product="uncharacterized protein X11Lbeta isoform X1" /protein_id="XP_070075089.1" /db_xref="GeneID:108060874" /translation="MVSTTLTTLAAGQTTSSSNHHHHHHHQQDQLQQQQHQQLQQQQH QQLPYQRLQPHAAAAAAAVGQQRGFYALNGSLELDCDSSNSNSYQQHQQQQQQQQQPP LILSQALLSPSPPLNDQINLLFPKCRPKQQPQQQQQQPQQHQTAQQQHAHLADVNTNS NSSSNRSSSPTTAGEREPLEIVGASSSPPPAKATPTSTPSYYKSVNIITQSPPPHSAS SHSSESLSSVTPRISTNPFLCAPLTPPTPPHHQQQQQQQQQQETEATGESAVERSRSG GAAGEEPDYPASFYYHTVGESRRGPGGYAEMPRKRSAALPASNRQQQQQQQQQQQQLL NGNGSQNPFIKENYWEAPPTRASLLLHSPTEYSEEQQQQQQQQQHIHASARRAYHQQR EQVYGISQRAQQQQQQQQPHILRVGRSPVNRSFSQQQQQQIAAARSNPCADGLTPLAS HYLYGSKSSLDQQPGDWEPREQRKLRLREEREREREREREREREREHLLLEQQQQLQL QEVQAARENHLSHLVGQQQQQQRKRHVYGEERDRERERERERDRERDLERDHRLVNGN ADPNESWQHLRVTTETLAEVGKLADKVHPNLNLNLNPNPNPNQGQNTEVNVYREHKLD AWKLERNYTLAVESRHGIIEYEGSPRRIGVTTSNLGPVTAASGASAIAGAATPADESE PPAAVEVATTPPQQQQQQQQQQVPMAAVPPLSSTATSLQKTAARAALAALAQSHPHNS HNILSSLLPNSSNPNPLNPSQMQIHSPQQPMQNYPVRPGFPQRIISPPNREPRSNSPP LQQQQQHQQQQQHQQQQHFASLMSNHSNNSNTNKQPLSSDNNAEDTSNDVSEIGTISD LTAPEAVGLGLAIGSAAGEVASRAATPPLLALGPPTAVAGSSANGTATGNGSGNGNGN GTVSGNATAAATGLGPLSLHTKSSTFDYLYEFSETRKVLEEFFKCPSTDEQPIMENGS DVDSIDIQYEFHSNFERDDEDLAEEEEAEDDEEGDDDADEENDEAEDEDEPLGQDRDQ NYRQQAPPTAGHASERLVYGGYGGQQSQPQLISQPLGVGMGVGVGVARRHYSGSPLMR DFDFFLDSTSRSSGERDGDQDGLNHNQLLSTGSGPGGVGVGVGPGGGHNYRYSPETTD YDSNCGDLDSLSGEMNGGVSTSCSNYAKYYASAMPVLEDGLSSGHTSDTENNNNNQKN NLQQAAAQGQQGHQGQQGQPQCPTSLSGSTSIGGGISMLMDMKRVSTNNSLNSMHNLT TTASTTDSNGGVAGHHLVATPSPSNGQSKGQPQSNQPKTLSLDQSPSNNHSKVFKNID PELDSLYSIGVFHRPDTVQMTPPPPAPAPHRKPNNNGNGNANSNAMVNSNGTGNNDVD LLQPSSKHTHTPLAAAISSTLQRSSPTLAASGNGNGMGIGIGSGKPRSAGSNCSSIGV PPPIPERSNLPNVAATQRSPSPGLNSPVWLSRKEGLLESGSDNNHSKNHSADEEDVDT DLETDRLLGHQRLDDQGYYDENKSWDRKPRSLLSKISPKQQMPSTKTRNGYNALLSST PELPPPIPPKGGMGNMGNGGKLLDLVGGMVQRSISRSSSEHSDKCSPSKLGMPLSISG GDVDVVASAVAAAAVAAASATSTAAEAALGSPGNGGGSERSTAGGGGGGLTNPGGAVK LVEPENAALNGGMTSGAGTGSGAGSGSGSGAANGTAVATTATANNNNNVGNSNSNNSS GSGAGSNSNSGEKKVKKSKSKEGGAVLIEGVLFRAKYLGSTQLVCEGQPTKSTRMMQA EEAVSRIKAPDGDVQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLV VLMARRRFVPQDIDDAPKPNRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANG IEDHRFVKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVVIVESGWG SMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGLSLVGLPLSTCQTYIKNTKNQTVV KFTVVPCAPVVEVKIKRPETKYQLGFSVQNGVICSLLRGGIAERGGVRVGHRIIEINN QSVVAVPHEKIVNLLATSVGEILMKTMPTSMFRLLTGQENPIYI" misc_feature 5585..6043 /gene="X11Lbeta" /note="X11-like Phosphotyrosine-binding (PTB) domain; Region: PTB_X11; cd01208" /db_xref="CDD:269919" misc_feature order(5618..5620,5852..5854,5951..5953) /gene="X11Lbeta" /note="putative phosphoinositide binding site [chemical binding]; other site" /db_xref="CDD:269919" misc_feature order(5672..5674,5819..5821,5828..5845,5975..5977, 6008..6010,6017..6019) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:269919" misc_feature 6140..6397 /gene="X11Lbeta" /note="PDZ domain 1 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ1_APBA1_3-like; cd06720" /db_xref="CDD:467203" misc_feature order(6173..6193,6233..6235,6242..6244,6332..6334, 6344..6346,6353..6358) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467203" misc_feature 6407..6640 /gene="X11Lbeta" /note="PDZ domain 2 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ2_APBA1_3-like; cd06793" /db_xref="CDD:467255" misc_feature order(6449..6469,6482..6484,6491..6493,6578..6580, 6590..6592,6599..6604) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467255" ORIGIN 1 cttcaaagtg agttcctcgg acggggtctt cagattcagt ttcagtgtgt tctctgactt 61 tggagcactt cgttaccccc atacgtgtgt ctaatcacaa attcttaatg taaaattctc 121 tttaaactaa ataattcaaa cacaaatcac acaaaccgaa aaccaaaatc taaaccaaac 181 aatcgaatcg aattgaatcg actcgaaatc gaaatcgcag acccaggcaa aactcgcatt 241 gaccaccaag catatgagct tgtggctaaa ggtgtctccg gcatcgactt gtttcatgtt 301 gtaactcgag gactttcgtt tattggcaac aataatggtc agcacaacat tgacaacact 361 ggctgctgga caaacaacta gtagcagtaa tcaccatcac caccaccatc accagcagga 421 tcagttgcag cagcagcaac atcagcagtt gcagcagcag cagcaccagc agttgcccta 481 ccagcgactg cagccacacg cagcagcagc agcggcagct gtcggccagc aacgcggctt 541 ctacgcactc aacggcagct tggagctgga ctgcgacagc agcaacagca acagctacca 601 gcaacatcag cagcagcagc aacagcagca gcaaccgccg ttgatcctgt cgcaggctct 661 gctgtcgcca tcgccgccgc tcaacgatca gatcaacttg cttttcccca agtgccgacc 721 caaacagcag ccgcaacagc agcagcagca gccgcagcaa catcagacag cacagcagca 781 acatgctcac ctggcggacg tgaataccaa cagcaacagc agcagcaatc ggagcagcag 841 cccaacaaca gccggtgaac gggagccgct ggaaattgtt ggtgccagta gtagtccacc 901 gccggccaag gccacgccca ccagtacgcc cagctactac aagagcgtga acatcataac 961 gcaatcgccg ccgcctcact cggcctcgtc tcactcctcc gaatcgcttt cctcggtgac 1021 gccgcgcatc tccacgaatc ccttcctctg cgcaccgctc acgccgccca caccgccgca 1081 ccaccagcag cagcagcagc agcagcaaca acaggaaacg gaggccaccg gcgagtcagc 1141 tgtggagcgg agcaggagcg gaggagcggc cggcgaggag cccgactatc ccgcctcctt 1201 ctactaccac acggtgggcg agagtaggcg tggtcccggc ggctacgcgg aaatgccgag 1261 aaaacgcagc gctgctttgc cagccagcaa caggcagcag cagcagcagc agcaacagca 1321 gcaacaacag ttgctcaacg gcaatgggag tcagaatcct ttcatcaagg agaactactg 1381 ggaggcgccg cccacaagag ccagtttgct gctccattcg cccacggagt actccgagga 1441 gcagcaacag cagcagcaac agcagcaaca tatacatgct tcggccagac gagcttacca 1501 ccagcagcgg gaacaggtgt acggaatcag tcagcgggca caacagcaac agcagcagca 1561 acagccgcac attttgcggg tgggaagaag tccggtgaat cgcagcttct cccagcagca 1621 acagcaacag attgctgctg ccaggagcaa tccctgcgcc gatggactga ctccgctggc 1681 cagtcactat ctgtatggca gcaagtcatc actggatcag cagccaggcg actgggagcc 1741 gcgggagcag cgcaaactga ggctgcgcga ggagcgggaa agggaaaggg agagggagag 1801 agagcgagaa agggagaggg agcacctgtt gctggagcaa cagcagcagc tgcaactaca 1861 ggaggttcag gcggccaggg agaaccacct cagccatttg gtgggtcagc agcagcagca 1921 gcagcgcaag cgacatgttt acggcgagga acgggatcga gagagggaaa gagaaaggga 1981 aagggatcga gaacgggact tggagcggga ccatcgcctg gtcaatggaa acgcagatcc 2041 caacgagagc tggcagcatc tgcgcgtaac gaccgaaact ttggcggagg tgggcaagct 2101 ggcggataag gtccacccca atctgaatct gaatctgaat ccgaacccga atccgaacca 2161 aggtcagaac acggaggtca atgtctacag ggagcacaag ctggacgcct ggaagctcga 2221 gcgcaactac acgctggccg tggagtcgcg ccacggcatc attgagtacg aaggctcgcc 2281 cagacgcatt ggagtgacca ccagtaattt ggggccagtg acggcggcat caggggcatc 2341 agcgatagca ggagcagcga caccagcgga cgaaagcgaa ccaccagcag cggtagaagt 2401 agcaacaaca ccaccacaac aacaacaaca gcagcagcag caacaggtgc ccatggccgc 2461 cgttccgccg ctgagctcca cggccacctc gctgcagaag acggcggccc gggcagcact 2521 ggccgccctg gcccagagcc acccccacaa ctcccacaac atcctcagct ccctgctccc 2581 gaactcatcc aacccgaacc cactgaaccc cagccagatg cagatccact cgccgcagca 2641 gcccatgcag aactatcccg ttcgtccggg ctttccacag cgcatcatct cgccacccaa 2701 tcgtgagccc cgcagcaact cgcctcctct gcaacagcag cagcaacatc agcagcagca 2761 gcaacatcag cagcaacaac actttgccag tctgatgagc aaccacagca acaactcgaa 2821 caccaacaag cagccgctga gcagcgacaa caacgccgag gacaccagca acgatgtgtc 2881 cgagattggc accatatccg acctgaccgc tccggaggca gtgggtctgg gcctggccat 2941 tggatccgcc gccggcgagg tggccagccg ggcggccacg ccccctcttt tggcactcgg 3001 gccaccgaca gcagtcgcgg gcagctctgc caacggaact gcaacgggaa acggaagcgg 3061 aaatggaaac ggaaacggaa ccgtaagcgg aaatgcaaca gcagcggcca ccggactggg 3121 tccactgagc ctgcacacaa aatcgtcgac cttcgattac ctctacgagt tctcggagac 3181 gcgcaaggtg ctggaggagt tcttcaagtg cccctccacc gacgagcagc ccataatgga 3241 aaacggcagc gatgtggaca gcattgacat ccagtacgag ttccacagca actttgagcg 3301 cgacgacgag gatttggccg aggaggagga ggccgaggac gacgaggagg gcgacgacga 3361 tgccgacgag gagaacgacg aggccgagga tgaggacgag ccgttgggtc aggatcgcga 3421 ccagaactac cgccagcagg cgcctcccac cgccggccac gcctccgagc gactcgtcta 3481 cggcggctac ggtggccagc agtcgcagcc ccagctgatt tcccagcccc tgggcgttgg 3541 catgggcgtg ggtgtgggcg tggcacggcg acactacagc ggcagtccgc tgatgcggga 3601 cttcgacttc ttcctggact ccaccagtcg gagcagcggc gagcgggacg gcgaccagga 3661 cgggctcaat cacaaccagc tgctgagcac gggcagcggc ccagggggcg tgggagtggg 3721 cgtgggcccg ggcggtggcc acaactaccg ctactcaccg gagaccaccg actacgactc 3781 caattgcggc gatctggaca gtctctcggg tgagatgaac ggcggcgtgt cgacctcctg 3841 ctcgaactac gccaagtact acgcctcggc catgccagtg ctggaggatg ggctctcctc 3901 gggtcacacc agcgacacgg agaacaacaa caacaaccag aagaacaacc tgcagcaggc 3961 ggcggcccaa gggcaacagg gtcatcaggg tcaacagggt caaccgcagt gccccaccag 4021 cctgagcgga agcaccagca tcggcggcgg catctccatg ctgatggaca tgaagcgcgt 4081 ctcgacgaac aacagtttga acagcatgca caacctgacc accaccgcct ccaccacgga 4141 cagcaacggg ggcgtggccg gtcaccacct ggtggccacg cccagtccca gcaatgggca 4201 atcgaagggg cagccgcaga gcaaccagcc gaagacactg tcactggacc agagtcccag 4261 caacaaccac agcaaagtgt tcaagaacat tgatccggaa ttggattcgc tctactcgat 4321 tggagtcttc caccgtccgg acacggtgca gatgacccca ccgcctcctg ctccggcgcc 4381 gcatcgcaag cccaacaaca atggcaacgg caatgccaat tccaatgcca tggtcaacag 4441 taatggcacc ggcaacaacg atgtggatct gctgcagccg agcagcaagc acactcacac 4501 tccgctggcg gcggccatca gttccacgct gcagcgcagt tcacccacct tggcggccag 4561 cggaaacgga aatggaatgg gaatcggaat cggaagtggc aagccccgaa gcgccggcag 4621 caattgcagc agcattggcg tgccgccgcc cattccggag aggagcaacc tccccaacgt 4681 cgccgccacg cagagatcac cgtcgccggg cctcaactca cccgtctggc tgtcccgcaa 4741 ggaggggctg ctggagtccg gctccgataa caaccactcg aagaaccaca gcgccgacga 4801 ggaggacgtg gacaccgatc tggagacgga ccgcctgctg ggccaccagc ggctggacga 4861 ccagggctac tacgacgaga acaagagctg ggaccgcaag ccgcgctcgc tgctctcgaa 4921 gatctcgccc aagcagcaga tgccgagcac caagacgcgc aacggctaca atgcgctgct 4981 cagctccacg ccggagctgc cgcccccgat tccacctaag ggaggcatgg gcaacatggg 5041 caacgggggc aagctgctgg acttggtcgg cggcatggtg cagcgcagca tatcgcgcag 5101 ctcctcggag cactcggaca agtgctcgcc cagcaaattg gggatgcccc tttccatttc 5161 cggcggggat gtggatgtgg tggcctcggc ggtggcggcg gcggcggtgg cggcagcctc 5221 tgccacatcg acggcggctg aagcggcgct gggaagtccg gggaatggag gaggctcgga 5281 gagatcgacg gcgggcggcg gcggcggcgg actgaccaat ccgggaggag cggtcaagtt 5341 ggtggagccg gagaacgcag ccctcaacgg gggaatgact tctggagcgg gcacaggatc 5401 gggagcagga tcgggatcag gatctggagc ggccaatgga accgcggtgg ccaccaccgc 5461 caccgccaac aacaacaaca acgtcggcaa cagcaacagc aacaacagca gcggcagcgg 5521 ggccggcagc aacagcaaca gcggcgagaa aaaagtgaaa aagagtaaga gcaaagaagg 5581 cggcgcagtg ctcatcgagg gcgttctctt cagggccaag tacttgggct ccacgcagct 5641 ggtctgcgaa ggtcagccca cgaaatccac gcggatgatg caggcggagg aagccgtttc 5701 caggatcaag gcacccgatg gcgatgtgca gcccagcacc gaggtggatc tgtttatttc 5761 gacggagaag atcatggtcc tgaacacgga cctcaaggag atcatgatgg accacgccct 5821 gcgcaccatc tcctatatcg cggacatcgg ggacctggtc gtcctgatgg cccgacgccg 5881 cttcgttccc caggacatcg acgatgcccc caagccgaat cgcacgccca agatgatatg 5941 ccatgtgttc gagagcgacg aggcccagtt tatcgcccag tcgattggcc aggccttcca 6001 ggtggcctac atggagttcc tcaaggccaa cggcatcgag gaccatcgct tcgtcaagga 6061 gatggactac caggaggtgc tcaacagcca ggagatcttc ggcgacgagc tggagatctt 6121 tgccaagaag gagctgcaga aggaggtggt cgtgccgaag gccaagggcg aaatcctggg 6181 cgtggtcata gtggagagtg gctggggctc catgctgccg accgtcgtca ttgccaatct 6241 gatgagctcg ggagcagccg cccggtgcgg gcagctcaac atcggcgacc agttgatagc 6301 catcaatggg ctgagcctcg tgggactgcc gctctccacc tgccagacgt acatcaagaa 6361 caccaagaac cagacggtgg tcaagttcac ggtggtgccc tgcgcccccg tcgtcgaggt 6421 gaagatcaag cggccggaga ccaagtacca gctcgggttt agcgtccaga atggagtgat 6481 ctgcagtctc ctgcgcggcg gcatcgcgga acggggtggt gttcgtgtgg gccatcgcat 6541 catcgagata aacaaccaga gcgtggtggc tgtgcctcac gagaagatcg ttaacttgct 6601 ggccacatcc gtgggagaga tactcatgaa gacgatgccc acgtccatgt tccgcctgct 6661 cactggtcag gaaaatccca tatatattta agccagcggg agaataataa acggcgatta 6721 ttgttaacta taaaaaccta acaaggatat tacgatattt agtatatata tacctattca 6781 tatagaaagc gaggaaaaca gagagagaga gagttaatat atgtatgtat atgcgtgtgt 6841 acctatatat ataaatatat atatatatat agatatatgc taaacatata tattacacac 6901 gagtgtatcg agattttttt tgtgagtaaa ctagacaaag ttcgatcgaa ggcgagttaa 6961 gagcagctac tacgacaaat aagaggaagc gataactaac acacatggca cgcctttttg 7021 caaagcttag taataatagt taataatgtg tgtgagatcg ggccatcggc caggacatgc 7081 atatgcatat aaacatgaaa caatatatat acacatatat atgaacacaa tgaccttttt 7141 gcgaaaacgt ccttagctta gttgaacggc gacattagtc agagaatact gcagctagta 7201 acagcccccc caaatatgct tacccatact tattgtaaaa accaaaaata aaatccagga 7261 aacacgaacc gaagacccaa acgagattca agtccacaca ggaggcaggc agctcttttg 7321 atatagtata tatataatcc acacactata tagcaccacc ccaatatatt tatataacaa 7381 aacagagggc gcgagaatgg atagcttgaa atggatataa gaatgaaaat aggaaatgga 7441 tatggaaatg gaaatggata ttgtaactgc agcgtttcgt tttctactcg cacccatagc 7501 cgagaatttt gatagttatt taacggatat agccagatcg taatgtatgc aaagtgtaaa 7561 ttgaggagcg ctttacaccc ccacaaatac atacatattc ccccatagag gatttagttt 7621 agcagacact tacactcaca ctcacttaga cgcttcgatt tcaaccatct tcgtccaaaa 7681 attgtgctac tactcgttaa acaagttgat agatatagag agagattaga gaaggataac 7741 aggagggcag gagagagaga cggagagagg aagggaaggc cggcgaagaa agagacagag 7801 ttagacctcc gttatgagcc ataagattta aaagaagacg gagacgggga acagactcga 7861 acagaaagag acggcaacag gaacggaaat agagacagaa ataagggcag acagagaggg 7921 agaattgcat ttctttgtgt gtatatgtat gtgtaaaata ctcgctattg gcccaaatgc 7981 aatccacgaa cagccggcat cagcagtcac taagagaact attattaact accagtacga 8041 tttaattatg taacggcaac agggcatttg cttgatgttt gtgaattgaa cgacttttcg 8101 gcctcatttc cgctgcttgg cacgggccac gcccacgccc accaaaaatc caagaacaaa 8161 aaccaaatta atatacaaaa caagaacata aaacattaac aactgcttca gcaaaccaat 8221 gagatgacat gaaaccgaaa caaatgcata caagaactaa tatttaatga attgtttttt 8281 tttttttggt gtacattatt tatatggaat gtgaaattgc ataacaaatt taatgaatat 8341 attgaatatt tattaaaacg ggctaattgc atagaaatta tataagaacg atcataacga 8401 tgattatttg taaaggcgaa ctaaacccaa gaaaaccgaa aacagaataa ataaataaaa 8461 gaatatataa tcacatgcat aacaaaaata taaaaccaaa aattgagcat aataaacaga 8521 aaa