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LOCUS XM_070218987 8457 bp mRNA linear INV 09-DEC-2024 variant X2, mRNA. ACCESSION XM_070218987 VERSION XM_070218987.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8457 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8457 /gene="X11Lbeta" /note="X11Lbeta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108060874" CDS 269..6625 /gene="X11Lbeta" /codon_start=1 /product="uncharacterized protein X11Lbeta isoform X1" /protein_id="XP_070075088.1" /db_xref="GeneID:108060874" /translation="MVSTTLTTLAAGQTTSSSNHHHHHHHQQDQLQQQQHQQLQQQQH QQLPYQRLQPHAAAAAAAVGQQRGFYALNGSLELDCDSSNSNSYQQHQQQQQQQQQPP LILSQALLSPSPPLNDQINLLFPKCRPKQQPQQQQQQPQQHQTAQQQHAHLADVNTNS NSSSNRSSSPTTAGEREPLEIVGASSSPPPAKATPTSTPSYYKSVNIITQSPPPHSAS SHSSESLSSVTPRISTNPFLCAPLTPPTPPHHQQQQQQQQQQETEATGESAVERSRSG GAAGEEPDYPASFYYHTVGESRRGPGGYAEMPRKRSAALPASNRQQQQQQQQQQQQLL NGNGSQNPFIKENYWEAPPTRASLLLHSPTEYSEEQQQQQQQQQHIHASARRAYHQQR EQVYGISQRAQQQQQQQQPHILRVGRSPVNRSFSQQQQQQIAAARSNPCADGLTPLAS HYLYGSKSSLDQQPGDWEPREQRKLRLREEREREREREREREREREHLLLEQQQQLQL QEVQAARENHLSHLVGQQQQQQRKRHVYGEERDRERERERERDRERDLERDHRLVNGN ADPNESWQHLRVTTETLAEVGKLADKVHPNLNLNLNPNPNPNQGQNTEVNVYREHKLD AWKLERNYTLAVESRHGIIEYEGSPRRIGVTTSNLGPVTAASGASAIAGAATPADESE PPAAVEVATTPPQQQQQQQQQQVPMAAVPPLSSTATSLQKTAARAALAALAQSHPHNS HNILSSLLPNSSNPNPLNPSQMQIHSPQQPMQNYPVRPGFPQRIISPPNREPRSNSPP LQQQQQHQQQQQHQQQQHFASLMSNHSNNSNTNKQPLSSDNNAEDTSNDVSEIGTISD LTAPEAVGLGLAIGSAAGEVASRAATPPLLALGPPTAVAGSSANGTATGNGSGNGNGN GTVSGNATAAATGLGPLSLHTKSSTFDYLYEFSETRKVLEEFFKCPSTDEQPIMENGS DVDSIDIQYEFHSNFERDDEDLAEEEEAEDDEEGDDDADEENDEAEDEDEPLGQDRDQ NYRQQAPPTAGHASERLVYGGYGGQQSQPQLISQPLGVGMGVGVGVARRHYSGSPLMR DFDFFLDSTSRSSGERDGDQDGLNHNQLLSTGSGPGGVGVGVGPGGGHNYRYSPETTD YDSNCGDLDSLSGEMNGGVSTSCSNYAKYYASAMPVLEDGLSSGHTSDTENNNNNQKN NLQQAAAQGQQGHQGQQGQPQCPTSLSGSTSIGGGISMLMDMKRVSTNNSLNSMHNLT TTASTTDSNGGVAGHHLVATPSPSNGQSKGQPQSNQPKTLSLDQSPSNNHSKVFKNID PELDSLYSIGVFHRPDTVQMTPPPPAPAPHRKPNNNGNGNANSNAMVNSNGTGNNDVD LLQPSSKHTHTPLAAAISSTLQRSSPTLAASGNGNGMGIGIGSGKPRSAGSNCSSIGV PPPIPERSNLPNVAATQRSPSPGLNSPVWLSRKEGLLESGSDNNHSKNHSADEEDVDT DLETDRLLGHQRLDDQGYYDENKSWDRKPRSLLSKISPKQQMPSTKTRNGYNALLSST PELPPPIPPKGGMGNMGNGGKLLDLVGGMVQRSISRSSSEHSDKCSPSKLGMPLSISG GDVDVVASAVAAAAVAAASATSTAAEAALGSPGNGGGSERSTAGGGGGGLTNPGGAVK LVEPENAALNGGMTSGAGTGSGAGSGSGSGAANGTAVATTATANNNNNVGNSNSNNSS GSGAGSNSNSGEKKVKKSKSKEGGAVLIEGVLFRAKYLGSTQLVCEGQPTKSTRMMQA EEAVSRIKAPDGDVQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLV VLMARRRFVPQDIDDAPKPNRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANG IEDHRFVKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVVIVESGWG SMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGLSLVGLPLSTCQTYIKNTKNQTVV KFTVVPCAPVVEVKIKRPETKYQLGFSVQNGVICSLLRGGIAERGGVRVGHRIIEINN QSVVAVPHEKIVNLLATSVGEILMKTMPTSMFRLLTGQENPIYI" misc_feature 5519..5977 /gene="X11Lbeta" /note="X11-like Phosphotyrosine-binding (PTB) domain; Region: PTB_X11; cd01208" /db_xref="CDD:269919" misc_feature order(5552..5554,5786..5788,5885..5887) /gene="X11Lbeta" /note="putative phosphoinositide binding site [chemical binding]; other site" /db_xref="CDD:269919" misc_feature order(5606..5608,5753..5755,5762..5779,5909..5911, 5942..5944,5951..5953) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:269919" misc_feature 6074..6331 /gene="X11Lbeta" /note="PDZ domain 1 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ1_APBA1_3-like; cd06720" /db_xref="CDD:467203" misc_feature order(6107..6127,6167..6169,6176..6178,6266..6268, 6278..6280,6287..6292) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467203" misc_feature 6341..6574 /gene="X11Lbeta" /note="PDZ domain 2 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ2_APBA1_3-like; cd06793" /db_xref="CDD:467255" misc_feature order(6383..6403,6416..6418,6425..6427,6512..6514, 6524..6526,6533..6538) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467255" ORIGIN 1 tggtgcgtgt gttgccctgt gtgtctaatc acaaattctt aatgtaaaat tctctttaaa 61 ctaaataatt caaacacaaa tcacacaaac cgaaaaccaa aatctaaacc aaacaatcga 121 atcgaattga atcgactcga aatcgaaatc gcagacccag gcaaaactcg cattgaccac 181 caagcatatg agcttgtggc taaaggtgtc tccggcatcg acttgtttca tgttgtaact 241 cgaggacttt cgtttattgg caacaataat ggtcagcaca acattgacaa cactggctgc 301 tggacaaaca actagtagca gtaatcacca tcaccaccac catcaccagc aggatcagtt 361 gcagcagcag caacatcagc agttgcagca gcagcagcac cagcagttgc cctaccagcg 421 actgcagcca cacgcagcag cagcagcggc agctgtcggc cagcaacgcg gcttctacgc 481 actcaacggc agcttggagc tggactgcga cagcagcaac agcaacagct accagcaaca 541 tcagcagcag cagcaacagc agcagcaacc gccgttgatc ctgtcgcagg ctctgctgtc 601 gccatcgccg ccgctcaacg atcagatcaa cttgcttttc cccaagtgcc gacccaaaca 661 gcagccgcaa cagcagcagc agcagccgca gcaacatcag acagcacagc agcaacatgc 721 tcacctggcg gacgtgaata ccaacagcaa cagcagcagc aatcggagca gcagcccaac 781 aacagccggt gaacgggagc cgctggaaat tgttggtgcc agtagtagtc caccgccggc 841 caaggccacg cccaccagta cgcccagcta ctacaagagc gtgaacatca taacgcaatc 901 gccgccgcct cactcggcct cgtctcactc ctccgaatcg ctttcctcgg tgacgccgcg 961 catctccacg aatcccttcc tctgcgcacc gctcacgccg cccacaccgc cgcaccacca 1021 gcagcagcag cagcagcagc aacaacagga aacggaggcc accggcgagt cagctgtgga 1081 gcggagcagg agcggaggag cggccggcga ggagcccgac tatcccgcct ccttctacta 1141 ccacacggtg ggcgagagta ggcgtggtcc cggcggctac gcggaaatgc cgagaaaacg 1201 cagcgctgct ttgccagcca gcaacaggca gcagcagcag cagcagcaac agcagcaaca 1261 acagttgctc aacggcaatg ggagtcagaa tcctttcatc aaggagaact actgggaggc 1321 gccgcccaca agagccagtt tgctgctcca ttcgcccacg gagtactccg aggagcagca 1381 acagcagcag caacagcagc aacatataca tgcttcggcc agacgagctt accaccagca 1441 gcgggaacag gtgtacggaa tcagtcagcg ggcacaacag caacagcagc agcaacagcc 1501 gcacattttg cgggtgggaa gaagtccggt gaatcgcagc ttctcccagc agcaacagca 1561 acagattgct gctgccagga gcaatccctg cgccgatgga ctgactccgc tggccagtca 1621 ctatctgtat ggcagcaagt catcactgga tcagcagcca ggcgactggg agccgcggga 1681 gcagcgcaaa ctgaggctgc gcgaggagcg ggaaagggaa agggagaggg agagagagcg 1741 agaaagggag agggagcacc tgttgctgga gcaacagcag cagctgcaac tacaggaggt 1801 tcaggcggcc agggagaacc acctcagcca tttggtgggt cagcagcagc agcagcagcg 1861 caagcgacat gtttacggcg aggaacggga tcgagagagg gaaagagaaa gggaaaggga 1921 tcgagaacgg gacttggagc gggaccatcg cctggtcaat ggaaacgcag atcccaacga 1981 gagctggcag catctgcgcg taacgaccga aactttggcg gaggtgggca agctggcgga 2041 taaggtccac cccaatctga atctgaatct gaatccgaac ccgaatccga accaaggtca 2101 gaacacggag gtcaatgtct acagggagca caagctggac gcctggaagc tcgagcgcaa 2161 ctacacgctg gccgtggagt cgcgccacgg catcattgag tacgaaggct cgcccagacg 2221 cattggagtg accaccagta atttggggcc agtgacggcg gcatcagggg catcagcgat 2281 agcaggagca gcgacaccag cggacgaaag cgaaccacca gcagcggtag aagtagcaac 2341 aacaccacca caacaacaac aacagcagca gcagcaacag gtgcccatgg ccgccgttcc 2401 gccgctgagc tccacggcca cctcgctgca gaagacggcg gcccgggcag cactggccgc 2461 cctggcccag agccaccccc acaactccca caacatcctc agctccctgc tcccgaactc 2521 atccaacccg aacccactga accccagcca gatgcagatc cactcgccgc agcagcccat 2581 gcagaactat cccgttcgtc cgggctttcc acagcgcatc atctcgccac ccaatcgtga 2641 gccccgcagc aactcgcctc ctctgcaaca gcagcagcaa catcagcagc agcagcaaca 2701 tcagcagcaa caacactttg ccagtctgat gagcaaccac agcaacaact cgaacaccaa 2761 caagcagccg ctgagcagcg acaacaacgc cgaggacacc agcaacgatg tgtccgagat 2821 tggcaccata tccgacctga ccgctccgga ggcagtgggt ctgggcctgg ccattggatc 2881 cgccgccggc gaggtggcca gccgggcggc cacgccccct cttttggcac tcgggccacc 2941 gacagcagtc gcgggcagct ctgccaacgg aactgcaacg ggaaacggaa gcggaaatgg 3001 aaacggaaac ggaaccgtaa gcggaaatgc aacagcagcg gccaccggac tgggtccact 3061 gagcctgcac acaaaatcgt cgaccttcga ttacctctac gagttctcgg agacgcgcaa 3121 ggtgctggag gagttcttca agtgcccctc caccgacgag cagcccataa tggaaaacgg 3181 cagcgatgtg gacagcattg acatccagta cgagttccac agcaactttg agcgcgacga 3241 cgaggatttg gccgaggagg aggaggccga ggacgacgag gagggcgacg acgatgccga 3301 cgaggagaac gacgaggccg aggatgagga cgagccgttg ggtcaggatc gcgaccagaa 3361 ctaccgccag caggcgcctc ccaccgccgg ccacgcctcc gagcgactcg tctacggcgg 3421 ctacggtggc cagcagtcgc agccccagct gatttcccag cccctgggcg ttggcatggg 3481 cgtgggtgtg ggcgtggcac ggcgacacta cagcggcagt ccgctgatgc gggacttcga 3541 cttcttcctg gactccacca gtcggagcag cggcgagcgg gacggcgacc aggacgggct 3601 caatcacaac cagctgctga gcacgggcag cggcccaggg ggcgtgggag tgggcgtggg 3661 cccgggcggt ggccacaact accgctactc accggagacc accgactacg actccaattg 3721 cggcgatctg gacagtctct cgggtgagat gaacggcggc gtgtcgacct cctgctcgaa 3781 ctacgccaag tactacgcct cggccatgcc agtgctggag gatgggctct cctcgggtca 3841 caccagcgac acggagaaca acaacaacaa ccagaagaac aacctgcagc aggcggcggc 3901 ccaagggcaa cagggtcatc agggtcaaca gggtcaaccg cagtgcccca ccagcctgag 3961 cggaagcacc agcatcggcg gcggcatctc catgctgatg gacatgaagc gcgtctcgac 4021 gaacaacagt ttgaacagca tgcacaacct gaccaccacc gcctccacca cggacagcaa 4081 cgggggcgtg gccggtcacc acctggtggc cacgcccagt cccagcaatg ggcaatcgaa 4141 ggggcagccg cagagcaacc agccgaagac actgtcactg gaccagagtc ccagcaacaa 4201 ccacagcaaa gtgttcaaga acattgatcc ggaattggat tcgctctact cgattggagt 4261 cttccaccgt ccggacacgg tgcagatgac cccaccgcct cctgctccgg cgccgcatcg 4321 caagcccaac aacaatggca acggcaatgc caattccaat gccatggtca acagtaatgg 4381 caccggcaac aacgatgtgg atctgctgca gccgagcagc aagcacactc acactccgct 4441 ggcggcggcc atcagttcca cgctgcagcg cagttcaccc accttggcgg ccagcggaaa 4501 cggaaatgga atgggaatcg gaatcggaag tggcaagccc cgaagcgccg gcagcaattg 4561 cagcagcatt ggcgtgccgc cgcccattcc ggagaggagc aacctcccca acgtcgccgc 4621 cacgcagaga tcaccgtcgc cgggcctcaa ctcacccgtc tggctgtccc gcaaggaggg 4681 gctgctggag tccggctccg ataacaacca ctcgaagaac cacagcgccg acgaggagga 4741 cgtggacacc gatctggaga cggaccgcct gctgggccac cagcggctgg acgaccaggg 4801 ctactacgac gagaacaaga gctgggaccg caagccgcgc tcgctgctct cgaagatctc 4861 gcccaagcag cagatgccga gcaccaagac gcgcaacggc tacaatgcgc tgctcagctc 4921 cacgccggag ctgccgcccc cgattccacc taagggaggc atgggcaaca tgggcaacgg 4981 gggcaagctg ctggacttgg tcggcggcat ggtgcagcgc agcatatcgc gcagctcctc 5041 ggagcactcg gacaagtgct cgcccagcaa attggggatg cccctttcca tttccggcgg 5101 ggatgtggat gtggtggcct cggcggtggc ggcggcggcg gtggcggcag cctctgccac 5161 atcgacggcg gctgaagcgg cgctgggaag tccggggaat ggaggaggct cggagagatc 5221 gacggcgggc ggcggcggcg gcggactgac caatccggga ggagcggtca agttggtgga 5281 gccggagaac gcagccctca acgggggaat gacttctgga gcgggcacag gatcgggagc 5341 aggatcggga tcaggatctg gagcggccaa tggaaccgcg gtggccacca ccgccaccgc 5401 caacaacaac aacaacgtcg gcaacagcaa cagcaacaac agcagcggca gcggggccgg 5461 cagcaacagc aacagcggcg agaaaaaagt gaaaaagagt aagagcaaag aaggcggcgc 5521 agtgctcatc gagggcgttc tcttcagggc caagtacttg ggctccacgc agctggtctg 5581 cgaaggtcag cccacgaaat ccacgcggat gatgcaggcg gaggaagccg tttccaggat 5641 caaggcaccc gatggcgatg tgcagcccag caccgaggtg gatctgttta tttcgacgga 5701 gaagatcatg gtcctgaaca cggacctcaa ggagatcatg atggaccacg ccctgcgcac 5761 catctcctat atcgcggaca tcggggacct ggtcgtcctg atggcccgac gccgcttcgt 5821 tccccaggac atcgacgatg cccccaagcc gaatcgcacg cccaagatga tatgccatgt 5881 gttcgagagc gacgaggccc agtttatcgc ccagtcgatt ggccaggcct tccaggtggc 5941 ctacatggag ttcctcaagg ccaacggcat cgaggaccat cgcttcgtca aggagatgga 6001 ctaccaggag gtgctcaaca gccaggagat cttcggcgac gagctggaga tctttgccaa 6061 gaaggagctg cagaaggagg tggtcgtgcc gaaggccaag ggcgaaatcc tgggcgtggt 6121 catagtggag agtggctggg gctccatgct gccgaccgtc gtcattgcca atctgatgag 6181 ctcgggagca gccgcccggt gcgggcagct caacatcggc gaccagttga tagccatcaa 6241 tgggctgagc ctcgtgggac tgccgctctc cacctgccag acgtacatca agaacaccaa 6301 gaaccagacg gtggtcaagt tcacggtggt gccctgcgcc cccgtcgtcg aggtgaagat 6361 caagcggccg gagaccaagt accagctcgg gtttagcgtc cagaatggag tgatctgcag 6421 tctcctgcgc ggcggcatcg cggaacgggg tggtgttcgt gtgggccatc gcatcatcga 6481 gataaacaac cagagcgtgg tggctgtgcc tcacgagaag atcgttaact tgctggccac 6541 atccgtggga gagatactca tgaagacgat gcccacgtcc atgttccgcc tgctcactgg 6601 tcaggaaaat cccatatata tttaagccag cgggagaata ataaacggcg attattgtta 6661 actataaaaa cctaacaagg atattacgat atttagtata tatataccta ttcatataga 6721 aagcgaggaa aacagagaga gagagagtta atatatgtat gtatatgcgt gtgtacctat 6781 atatataaat atatatatat atatagatat atgctaaaca tatatattac acacgagtgt 6841 atcgagattt tttttgtgag taaactagac aaagttcgat cgaaggcgag ttaagagcag 6901 ctactacgac aaataagagg aagcgataac taacacacat ggcacgcctt tttgcaaagc 6961 ttagtaataa tagttaataa tgtgtgtgag atcgggccat cggccaggac atgcatatgc 7021 atataaacat gaaacaatat atatacacat atatatgaac acaatgacct ttttgcgaaa 7081 acgtccttag cttagttgaa cggcgacatt agtcagagaa tactgcagct agtaacagcc 7141 cccccaaata tgcttaccca tacttattgt aaaaaccaaa aataaaatcc aggaaacacg 7201 aaccgaagac ccaaacgaga ttcaagtcca cacaggaggc aggcagctct tttgatatag 7261 tatatatata atccacacac tatatagcac caccccaata tatttatata acaaaacaga 7321 gggcgcgaga atggatagct tgaaatggat ataagaatga aaataggaaa tggatatgga 7381 aatggaaatg gatattgtaa ctgcagcgtt tcgttttcta ctcgcaccca tagccgagaa 7441 ttttgatagt tatttaacgg atatagccag atcgtaatgt atgcaaagtg taaattgagg 7501 agcgctttac acccccacaa atacatacat attcccccat agaggattta gtttagcaga 7561 cacttacact cacactcact tagacgcttc gatttcaacc atcttcgtcc aaaaattgtg 7621 ctactactcg ttaaacaagt tgatagatat agagagagat tagagaagga taacaggagg 7681 gcaggagaga gagacggaga gaggaaggga aggccggcga agaaagagac agagttagac 7741 ctccgttatg agccataaga tttaaaagaa gacggagacg gggaacagac tcgaacagaa 7801 agagacggca acaggaacgg aaatagagac agaaataagg gcagacagag agggagaatt 7861 gcatttcttt gtgtgtatat gtatgtgtaa aatactcgct attggcccaa atgcaatcca 7921 cgaacagccg gcatcagcag tcactaagag aactattatt aactaccagt acgatttaat 7981 tatgtaacgg caacagggca tttgcttgat gtttgtgaat tgaacgactt ttcggcctca 8041 tttccgctgc ttggcacggg ccacgcccac gcccaccaaa aatccaagaa caaaaaccaa 8101 attaatatac aaaacaagaa cataaaacat taacaactgc ttcagcaaac caatgagatg 8161 acatgaaacc gaaacaaatg catacaagaa ctaatattta atgaattgtt tttttttttt 8221 tggtgtacat tatttatatg gaatgtgaaa ttgcataaca aatttaatga atatattgaa 8281 tatttattaa aacgggctaa ttgcatagaa attatataag aacgatcata acgatgatta 8341 tttgtaaagg cgaactaaac ccaagaaaac cgaaaacaga ataaataaat aaaagaatat 8401 ataatcacat gcataacaaa aatataaaac caaaaattga gcataataaa cagaaaa