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LOCUS XM_070218986 8739 bp mRNA linear INV 09-DEC-2024 variant X1, mRNA. ACCESSION XM_070218986 VERSION XM_070218986.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8739 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8739 /gene="X11Lbeta" /note="X11Lbeta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108060874" CDS 551..6907 /gene="X11Lbeta" /codon_start=1 /product="uncharacterized protein X11Lbeta isoform X1" /protein_id="XP_070075087.1" /db_xref="GeneID:108060874" /translation="MVSTTLTTLAAGQTTSSSNHHHHHHHQQDQLQQQQHQQLQQQQH QQLPYQRLQPHAAAAAAAVGQQRGFYALNGSLELDCDSSNSNSYQQHQQQQQQQQQPP LILSQALLSPSPPLNDQINLLFPKCRPKQQPQQQQQQPQQHQTAQQQHAHLADVNTNS NSSSNRSSSPTTAGEREPLEIVGASSSPPPAKATPTSTPSYYKSVNIITQSPPPHSAS SHSSESLSSVTPRISTNPFLCAPLTPPTPPHHQQQQQQQQQQETEATGESAVERSRSG GAAGEEPDYPASFYYHTVGESRRGPGGYAEMPRKRSAALPASNRQQQQQQQQQQQQLL NGNGSQNPFIKENYWEAPPTRASLLLHSPTEYSEEQQQQQQQQQHIHASARRAYHQQR EQVYGISQRAQQQQQQQQPHILRVGRSPVNRSFSQQQQQQIAAARSNPCADGLTPLAS HYLYGSKSSLDQQPGDWEPREQRKLRLREEREREREREREREREREHLLLEQQQQLQL QEVQAARENHLSHLVGQQQQQQRKRHVYGEERDRERERERERDRERDLERDHRLVNGN ADPNESWQHLRVTTETLAEVGKLADKVHPNLNLNLNPNPNPNQGQNTEVNVYREHKLD AWKLERNYTLAVESRHGIIEYEGSPRRIGVTTSNLGPVTAASGASAIAGAATPADESE PPAAVEVATTPPQQQQQQQQQQVPMAAVPPLSSTATSLQKTAARAALAALAQSHPHNS HNILSSLLPNSSNPNPLNPSQMQIHSPQQPMQNYPVRPGFPQRIISPPNREPRSNSPP LQQQQQHQQQQQHQQQQHFASLMSNHSNNSNTNKQPLSSDNNAEDTSNDVSEIGTISD LTAPEAVGLGLAIGSAAGEVASRAATPPLLALGPPTAVAGSSANGTATGNGSGNGNGN GTVSGNATAAATGLGPLSLHTKSSTFDYLYEFSETRKVLEEFFKCPSTDEQPIMENGS DVDSIDIQYEFHSNFERDDEDLAEEEEAEDDEEGDDDADEENDEAEDEDEPLGQDRDQ NYRQQAPPTAGHASERLVYGGYGGQQSQPQLISQPLGVGMGVGVGVARRHYSGSPLMR DFDFFLDSTSRSSGERDGDQDGLNHNQLLSTGSGPGGVGVGVGPGGGHNYRYSPETTD YDSNCGDLDSLSGEMNGGVSTSCSNYAKYYASAMPVLEDGLSSGHTSDTENNNNNQKN NLQQAAAQGQQGHQGQQGQPQCPTSLSGSTSIGGGISMLMDMKRVSTNNSLNSMHNLT TTASTTDSNGGVAGHHLVATPSPSNGQSKGQPQSNQPKTLSLDQSPSNNHSKVFKNID PELDSLYSIGVFHRPDTVQMTPPPPAPAPHRKPNNNGNGNANSNAMVNSNGTGNNDVD LLQPSSKHTHTPLAAAISSTLQRSSPTLAASGNGNGMGIGIGSGKPRSAGSNCSSIGV PPPIPERSNLPNVAATQRSPSPGLNSPVWLSRKEGLLESGSDNNHSKNHSADEEDVDT DLETDRLLGHQRLDDQGYYDENKSWDRKPRSLLSKISPKQQMPSTKTRNGYNALLSST PELPPPIPPKGGMGNMGNGGKLLDLVGGMVQRSISRSSSEHSDKCSPSKLGMPLSISG GDVDVVASAVAAAAVAAASATSTAAEAALGSPGNGGGSERSTAGGGGGGLTNPGGAVK LVEPENAALNGGMTSGAGTGSGAGSGSGSGAANGTAVATTATANNNNNVGNSNSNNSS GSGAGSNSNSGEKKVKKSKSKEGGAVLIEGVLFRAKYLGSTQLVCEGQPTKSTRMMQA EEAVSRIKAPDGDVQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLV VLMARRRFVPQDIDDAPKPNRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANG IEDHRFVKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVVIVESGWG SMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGLSLVGLPLSTCQTYIKNTKNQTVV KFTVVPCAPVVEVKIKRPETKYQLGFSVQNGVICSLLRGGIAERGGVRVGHRIIEINN QSVVAVPHEKIVNLLATSVGEILMKTMPTSMFRLLTGQENPIYI" misc_feature 5801..6259 /gene="X11Lbeta" /note="X11-like Phosphotyrosine-binding (PTB) domain; Region: PTB_X11; cd01208" /db_xref="CDD:269919" misc_feature order(5834..5836,6068..6070,6167..6169) /gene="X11Lbeta" /note="putative phosphoinositide binding site [chemical binding]; other site" /db_xref="CDD:269919" misc_feature order(5888..5890,6035..6037,6044..6061,6191..6193, 6224..6226,6233..6235) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:269919" misc_feature 6356..6613 /gene="X11Lbeta" /note="PDZ domain 1 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ1_APBA1_3-like; cd06720" /db_xref="CDD:467203" misc_feature order(6389..6409,6449..6451,6458..6460,6548..6550, 6560..6562,6569..6574) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467203" misc_feature 6623..6856 /gene="X11Lbeta" /note="PDZ domain 2 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ2_APBA1_3-like; cd06793" /db_xref="CDD:467255" misc_feature order(6665..6685,6698..6700,6707..6709,6794..6796, 6806..6808,6815..6820) /gene="X11Lbeta" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467255" ORIGIN 1 cagtgtgttc tctgactttg gagcacttcg ttacccccat acggtgcgca caccaacagg 61 ccaaaacggc atgaatacag agatatacga taataaacaa gacccccaga agctcaaaga 121 ctaagtgaaa ttgtgcaaaa atcgtggggc ttacgcgagt gtggcaagtg ccaaagtttc 181 gaactttgat attttttttt caaaatttct tcgttgataa ttgtagactg aaattgaatt 241 tcccccagaa gtctgcaggc ccataaacgc gcgcgtgttc gcctgatttg acagagtgtt 301 gtgtgtctaa tcacaaattc ttaatgtaaa attctcttta aactaaataa ttcaaacaca 361 aatcacacaa accgaaaacc aaaatctaaa ccaaacaatc gaatcgaatt gaatcgactc 421 gaaatcgaaa tcgcagaccc aggcaaaact cgcattgacc accaagcata tgagcttgtg 481 gctaaaggtg tctccggcat cgacttgttt catgttgtaa ctcgaggact ttcgtttatt 541 ggcaacaata atggtcagca caacattgac aacactggct gctggacaaa caactagtag 601 cagtaatcac catcaccacc accatcacca gcaggatcag ttgcagcagc agcaacatca 661 gcagttgcag cagcagcagc accagcagtt gccctaccag cgactgcagc cacacgcagc 721 agcagcagcg gcagctgtcg gccagcaacg cggcttctac gcactcaacg gcagcttgga 781 gctggactgc gacagcagca acagcaacag ctaccagcaa catcagcagc agcagcaaca 841 gcagcagcaa ccgccgttga tcctgtcgca ggctctgctg tcgccatcgc cgccgctcaa 901 cgatcagatc aacttgcttt tccccaagtg ccgacccaaa cagcagccgc aacagcagca 961 gcagcagccg cagcaacatc agacagcaca gcagcaacat gctcacctgg cggacgtgaa 1021 taccaacagc aacagcagca gcaatcggag cagcagccca acaacagccg gtgaacggga 1081 gccgctggaa attgttggtg ccagtagtag tccaccgccg gccaaggcca cgcccaccag 1141 tacgcccagc tactacaaga gcgtgaacat cataacgcaa tcgccgccgc ctcactcggc 1201 ctcgtctcac tcctccgaat cgctttcctc ggtgacgccg cgcatctcca cgaatccctt 1261 cctctgcgca ccgctcacgc cgcccacacc gccgcaccac cagcagcagc agcagcagca 1321 gcaacaacag gaaacggagg ccaccggcga gtcagctgtg gagcggagca ggagcggagg 1381 agcggccggc gaggagcccg actatcccgc ctccttctac taccacacgg tgggcgagag 1441 taggcgtggt cccggcggct acgcggaaat gccgagaaaa cgcagcgctg ctttgccagc 1501 cagcaacagg cagcagcagc agcagcagca acagcagcaa caacagttgc tcaacggcaa 1561 tgggagtcag aatcctttca tcaaggagaa ctactgggag gcgccgccca caagagccag 1621 tttgctgctc cattcgccca cggagtactc cgaggagcag caacagcagc agcaacagca 1681 gcaacatata catgcttcgg ccagacgagc ttaccaccag cagcgggaac aggtgtacgg 1741 aatcagtcag cgggcacaac agcaacagca gcagcaacag ccgcacattt tgcgggtggg 1801 aagaagtccg gtgaatcgca gcttctccca gcagcaacag caacagattg ctgctgccag 1861 gagcaatccc tgcgccgatg gactgactcc gctggccagt cactatctgt atggcagcaa 1921 gtcatcactg gatcagcagc caggcgactg ggagccgcgg gagcagcgca aactgaggct 1981 gcgcgaggag cgggaaaggg aaagggagag ggagagagag cgagaaaggg agagggagca 2041 cctgttgctg gagcaacagc agcagctgca actacaggag gttcaggcgg ccagggagaa 2101 ccacctcagc catttggtgg gtcagcagca gcagcagcag cgcaagcgac atgtttacgg 2161 cgaggaacgg gatcgagaga gggaaagaga aagggaaagg gatcgagaac gggacttgga 2221 gcgggaccat cgcctggtca atggaaacgc agatcccaac gagagctggc agcatctgcg 2281 cgtaacgacc gaaactttgg cggaggtggg caagctggcg gataaggtcc accccaatct 2341 gaatctgaat ctgaatccga acccgaatcc gaaccaaggt cagaacacgg aggtcaatgt 2401 ctacagggag cacaagctgg acgcctggaa gctcgagcgc aactacacgc tggccgtgga 2461 gtcgcgccac ggcatcattg agtacgaagg ctcgcccaga cgcattggag tgaccaccag 2521 taatttgggg ccagtgacgg cggcatcagg ggcatcagcg atagcaggag cagcgacacc 2581 agcggacgaa agcgaaccac cagcagcggt agaagtagca acaacaccac cacaacaaca 2641 acaacagcag cagcagcaac aggtgcccat ggccgccgtt ccgccgctga gctccacggc 2701 cacctcgctg cagaagacgg cggcccgggc agcactggcc gccctggccc agagccaccc 2761 ccacaactcc cacaacatcc tcagctccct gctcccgaac tcatccaacc cgaacccact 2821 gaaccccagc cagatgcaga tccactcgcc gcagcagccc atgcagaact atcccgttcg 2881 tccgggcttt ccacagcgca tcatctcgcc acccaatcgt gagccccgca gcaactcgcc 2941 tcctctgcaa cagcagcagc aacatcagca gcagcagcaa catcagcagc aacaacactt 3001 tgccagtctg atgagcaacc acagcaacaa ctcgaacacc aacaagcagc cgctgagcag 3061 cgacaacaac gccgaggaca ccagcaacga tgtgtccgag attggcacca tatccgacct 3121 gaccgctccg gaggcagtgg gtctgggcct ggccattgga tccgccgccg gcgaggtggc 3181 cagccgggcg gccacgcccc ctcttttggc actcgggcca ccgacagcag tcgcgggcag 3241 ctctgccaac ggaactgcaa cgggaaacgg aagcggaaat ggaaacggaa acggaaccgt 3301 aagcggaaat gcaacagcag cggccaccgg actgggtcca ctgagcctgc acacaaaatc 3361 gtcgaccttc gattacctct acgagttctc ggagacgcgc aaggtgctgg aggagttctt 3421 caagtgcccc tccaccgacg agcagcccat aatggaaaac ggcagcgatg tggacagcat 3481 tgacatccag tacgagttcc acagcaactt tgagcgcgac gacgaggatt tggccgagga 3541 ggaggaggcc gaggacgacg aggagggcga cgacgatgcc gacgaggaga acgacgaggc 3601 cgaggatgag gacgagccgt tgggtcagga tcgcgaccag aactaccgcc agcaggcgcc 3661 tcccaccgcc ggccacgcct ccgagcgact cgtctacggc ggctacggtg gccagcagtc 3721 gcagccccag ctgatttccc agcccctggg cgttggcatg ggcgtgggtg tgggcgtggc 3781 acggcgacac tacagcggca gtccgctgat gcgggacttc gacttcttcc tggactccac 3841 cagtcggagc agcggcgagc gggacggcga ccaggacggg ctcaatcaca accagctgct 3901 gagcacgggc agcggcccag ggggcgtggg agtgggcgtg ggcccgggcg gtggccacaa 3961 ctaccgctac tcaccggaga ccaccgacta cgactccaat tgcggcgatc tggacagtct 4021 ctcgggtgag atgaacggcg gcgtgtcgac ctcctgctcg aactacgcca agtactacgc 4081 ctcggccatg ccagtgctgg aggatgggct ctcctcgggt cacaccagcg acacggagaa 4141 caacaacaac aaccagaaga acaacctgca gcaggcggcg gcccaagggc aacagggtca 4201 tcagggtcaa cagggtcaac cgcagtgccc caccagcctg agcggaagca ccagcatcgg 4261 cggcggcatc tccatgctga tggacatgaa gcgcgtctcg acgaacaaca gtttgaacag 4321 catgcacaac ctgaccacca ccgcctccac cacggacagc aacgggggcg tggccggtca 4381 ccacctggtg gccacgccca gtcccagcaa tgggcaatcg aaggggcagc cgcagagcaa 4441 ccagccgaag acactgtcac tggaccagag tcccagcaac aaccacagca aagtgttcaa 4501 gaacattgat ccggaattgg attcgctcta ctcgattgga gtcttccacc gtccggacac 4561 ggtgcagatg accccaccgc ctcctgctcc ggcgccgcat cgcaagccca acaacaatgg 4621 caacggcaat gccaattcca atgccatggt caacagtaat ggcaccggca acaacgatgt 4681 ggatctgctg cagccgagca gcaagcacac tcacactccg ctggcggcgg ccatcagttc 4741 cacgctgcag cgcagttcac ccaccttggc ggccagcgga aacggaaatg gaatgggaat 4801 cggaatcgga agtggcaagc cccgaagcgc cggcagcaat tgcagcagca ttggcgtgcc 4861 gccgcccatt ccggagagga gcaacctccc caacgtcgcc gccacgcaga gatcaccgtc 4921 gccgggcctc aactcacccg tctggctgtc ccgcaaggag gggctgctgg agtccggctc 4981 cgataacaac cactcgaaga accacagcgc cgacgaggag gacgtggaca ccgatctgga 5041 gacggaccgc ctgctgggcc accagcggct ggacgaccag ggctactacg acgagaacaa 5101 gagctgggac cgcaagccgc gctcgctgct ctcgaagatc tcgcccaagc agcagatgcc 5161 gagcaccaag acgcgcaacg gctacaatgc gctgctcagc tccacgccgg agctgccgcc 5221 cccgattcca cctaagggag gcatgggcaa catgggcaac gggggcaagc tgctggactt 5281 ggtcggcggc atggtgcagc gcagcatatc gcgcagctcc tcggagcact cggacaagtg 5341 ctcgcccagc aaattgggga tgcccctttc catttccggc ggggatgtgg atgtggtggc 5401 ctcggcggtg gcggcggcgg cggtggcggc agcctctgcc acatcgacgg cggctgaagc 5461 ggcgctggga agtccgggga atggaggagg ctcggagaga tcgacggcgg gcggcggcgg 5521 cggcggactg accaatccgg gaggagcggt caagttggtg gagccggaga acgcagccct 5581 caacggggga atgacttctg gagcgggcac aggatcggga gcaggatcgg gatcaggatc 5641 tggagcggcc aatggaaccg cggtggccac caccgccacc gccaacaaca acaacaacgt 5701 cggcaacagc aacagcaaca acagcagcgg cagcggggcc ggcagcaaca gcaacagcgg 5761 cgagaaaaaa gtgaaaaaga gtaagagcaa agaaggcggc gcagtgctca tcgagggcgt 5821 tctcttcagg gccaagtact tgggctccac gcagctggtc tgcgaaggtc agcccacgaa 5881 atccacgcgg atgatgcagg cggaggaagc cgtttccagg atcaaggcac ccgatggcga 5941 tgtgcagccc agcaccgagg tggatctgtt tatttcgacg gagaagatca tggtcctgaa 6001 cacggacctc aaggagatca tgatggacca cgccctgcgc accatctcct atatcgcgga 6061 catcggggac ctggtcgtcc tgatggcccg acgccgcttc gttccccagg acatcgacga 6121 tgcccccaag ccgaatcgca cgcccaagat gatatgccat gtgttcgaga gcgacgaggc 6181 ccagtttatc gcccagtcga ttggccaggc cttccaggtg gcctacatgg agttcctcaa 6241 ggccaacggc atcgaggacc atcgcttcgt caaggagatg gactaccagg aggtgctcaa 6301 cagccaggag atcttcggcg acgagctgga gatctttgcc aagaaggagc tgcagaagga 6361 ggtggtcgtg ccgaaggcca agggcgaaat cctgggcgtg gtcatagtgg agagtggctg 6421 gggctccatg ctgccgaccg tcgtcattgc caatctgatg agctcgggag cagccgcccg 6481 gtgcgggcag ctcaacatcg gcgaccagtt gatagccatc aatgggctga gcctcgtggg 6541 actgccgctc tccacctgcc agacgtacat caagaacacc aagaaccaga cggtggtcaa 6601 gttcacggtg gtgccctgcg cccccgtcgt cgaggtgaag atcaagcggc cggagaccaa 6661 gtaccagctc gggtttagcg tccagaatgg agtgatctgc agtctcctgc gcggcggcat 6721 cgcggaacgg ggtggtgttc gtgtgggcca tcgcatcatc gagataaaca accagagcgt 6781 ggtggctgtg cctcacgaga agatcgttaa cttgctggcc acatccgtgg gagagatact 6841 catgaagacg atgcccacgt ccatgttccg cctgctcact ggtcaggaaa atcccatata 6901 tatttaagcc agcgggagaa taataaacgg cgattattgt taactataaa aacctaacaa 6961 ggatattacg atatttagta tatatatacc tattcatata gaaagcgagg aaaacagaga 7021 gagagagagt taatatatgt atgtatatgc gtgtgtacct atatatataa atatatatat 7081 atatatagat atatgctaaa catatatatt acacacgagt gtatcgagat tttttttgtg 7141 agtaaactag acaaagttcg atcgaaggcg agttaagagc agctactacg acaaataaga 7201 ggaagcgata actaacacac atggcacgcc tttttgcaaa gcttagtaat aatagttaat 7261 aatgtgtgtg agatcgggcc atcggccagg acatgcatat gcatataaac atgaaacaat 7321 atatatacac atatatatga acacaatgac ctttttgcga aaacgtcctt agcttagttg 7381 aacggcgaca ttagtcagag aatactgcag ctagtaacag cccccccaaa tatgcttacc 7441 catacttatt gtaaaaacca aaaataaaat ccaggaaaca cgaaccgaag acccaaacga 7501 gattcaagtc cacacaggag gcaggcagct cttttgatat agtatatata taatccacac 7561 actatatagc accaccccaa tatatttata taacaaaaca gagggcgcga gaatggatag 7621 cttgaaatgg atataagaat gaaaatagga aatggatatg gaaatggaaa tggatattgt 7681 aactgcagcg tttcgttttc tactcgcacc catagccgag aattttgata gttatttaac 7741 ggatatagcc agatcgtaat gtatgcaaag tgtaaattga ggagcgcttt acacccccac 7801 aaatacatac atattccccc atagaggatt tagtttagca gacacttaca ctcacactca 7861 cttagacgct tcgatttcaa ccatcttcgt ccaaaaattg tgctactact cgttaaacaa 7921 gttgatagat atagagagag attagagaag gataacagga gggcaggaga gagagacgga 7981 gagaggaagg gaaggccggc gaagaaagag acagagttag acctccgtta tgagccataa 8041 gatttaaaag aagacggaga cggggaacag actcgaacag aaagagacgg caacaggaac 8101 ggaaatagag acagaaataa gggcagacag agagggagaa ttgcatttct ttgtgtgtat 8161 atgtatgtgt aaaatactcg ctattggccc aaatgcaatc cacgaacagc cggcatcagc 8221 agtcactaag agaactatta ttaactacca gtacgattta attatgtaac ggcaacaggg 8281 catttgcttg atgtttgtga attgaacgac ttttcggcct catttccgct gcttggcacg 8341 ggccacgccc acgcccacca aaaatccaag aacaaaaacc aaattaatat acaaaacaag 8401 aacataaaac attaacaact gcttcagcaa accaatgaga tgacatgaaa ccgaaacaaa 8461 tgcatacaag aactaatatt taatgaattg tttttttttt tttggtgtac attatttata 8521 tggaatgtga aattgcataa caaatttaat gaatatattg aatatttatt aaaacgggct 8581 aattgcatag aaattatata agaacgatca taacgatgat tatttgtaaa ggcgaactaa 8641 acccaagaaa accgaaaaca gaataaataa ataaaagaat atataatcac atgcataaca 8701 aaaatataaa accaaaaatt gagcataata aacagaaaa