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LOCUS XM_070218984 6891 bp mRNA linear INV 09-DEC-2024 protein (LOC108068116), mRNA. ACCESSION XM_070218984 VERSION XM_070218984.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq; corrected model. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## internal stop codons :: corrected 1 genomic stop codon ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..6891 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6891 /gene="LOC108068116" /note="pneumococcal serine-rich repeat protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108068116" CDS 239..5446 /gene="LOC108068116" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon" /codon_start=1 /transl_except=(pos:4385..4387,aa:OTHER) /product="LOW QUALITY PROTEIN: pneumococcal serine-rich repeat protein" /protein_id="XP_070075085.1" /db_xref="GeneID:108068116" /translation="MASEDVQITSVIDANGQSLPLHGNSLGGPLGPPVKQERPDDAEI RELAAKMKEQQKQQAAQQASRQAAMQHSNGGTASSGSSSSAGGGGNMQPPITNGNGQT NIMSYLSRHQKLPNGTMQVVPALSSNGQQRANGNDSSSAADKKSSGPCDEESIMGHFG WAQFGKVSIPYIFRQSEKYCSVRMIELKLLGKYLNCLHPDIYSSCTCVRSYYITDAEA RLFIEINHKHCDGEFGRDIFNQKDLVVRLSDASKFYQFLDICYRKLVSGSKTPSEKCG FIRINKESVVPYTVRNNQQVVPLFYFEGETENLKTKAELLNGWDLAYLKFCCKVQGIR NELFSSENVAVISLTDIKSYFPNGTEFEDYWPSKVVDSNLLIGNRANVNNSVNWTRQP SAPPPKVTNTGSGSSSGGSNSSSSGGNMGQNSSSSSSSASNSAGGGGGQQVTSKSQQQ QQHASAAAAAATAAQQQHLMKQRAAAAAAAAGANGVANAANSFGAAAVAAFNSQAAAA ASMLQQSQAGNNRMLSQATVQALASSGWMSGQSNLQLHAQMMAQQTHANANRVGSYRE HMNNLMMSGSSRQPYSYNNPAISMSSVNNHSGGGGNAPPPLVRSAAGQNANHMSNVEQ SLVQQQQQQTQQQPQQQRHQNSTFNNNNNQNNNHATQQQQQHSSPNNQNNNSHHHQQQ LAKSLSSNRSNMQHSNMSNRSSSNSSNNNSNSAAAVAAAAAGYVQALLGGGTGGGGGG GAGGVATGAGAGNNNSNAFNYNLPSTRADYTNLALWNQLTPAQRLLFSQQLKGVTTSP VSNPSSSSHHHPTSVVGKQNFPALPSLPLDTDLITMLDYNNPNKANKSQKSGNVTFTK PIVPPLIPDGSGAEITLTKSRRNGGSDGGAVAPTSGTTIPLNSTQALEDFEKKFTVMT DEMRAVIQKVLANPDLSTFIQTNSGSNNNSNNNHLVPSYISPPMSPSVVGMNMGMAMG NVAATLTLASNPNVTITPQLPGHFLHSPSSSCSSSSASNTAASPLGSGGGGGSGSNGG GATSGGVSSSSGRQKSVICSTKSNNLPMAILSLASNNNSLGVSSNSNAGGRRTNSSNN NNSSYGRQTHSQNSSTQNSSTHSSTTATPTDVIDLSSSRRSLAASAAYLQQHSSAVAQ QQQQAAAAQVVAQHQRLAAAAAHHAQHAQQNGRGGGGSSSGNSGNSGGSNANSSGSNA NSSGSNNGTSGTGGGSTGNNGSSNSNSASMHLQRHAALVAAATAADSAQRLCVIPEIP TNNMNLTPYKVQKVCVDKHLVPCINMKAYNDSEQLMTLIEFQKNFFPSVPLDHCKRLI EALGVELYKANRRQVQILMEYDRSYNENMPLVQVRDIIKYMTQLTFMTRQPEQPPAKR TRTSXELSWGAQHLPPTTSTTVTAAATIPTTQTATNSSNNTTATVHTRSTAAAAGIPL RRRALTPPANGEVLTRRRALAPPPAPPVPATPPGTAGSPATPATHNSNTYEMLYSHNH TQSHHSHHPTAAAQQHHQQQHEQQRLLKKRQHAEQTAAKNPRQKMAEVEHAYLSNLYG KAAASMLSPPLGNVQPEWEQQRQLRRNQAAAQQQQQPQQQQTVAPPPQQRHIMHRRHS VCAAGLASLSPASSTHSSSTASPTAAAAALAAASYYGSAAAAAAAAFTAPYQHHHHHH AAAAAAAAAAHHHHHHHAAAAAAAAAAAAAAAAAHHTHGQPSPTIYPPTPPPSAPWVH PWYAGDAAF" polyA_site 6891 /gene="LOC108068116" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgttgcgctg atccgccgga gaagccacca cttcgcacat gttgctaaat cttttgttgt 61 taacaaaata gcggcgataa ccgataggaa ggagcttgcg ataggaggac atcacatcgg 121 ccgataacac atccgctcct gaatacaaac caactgtgaa aaccgataag ccgggaaaag 181 cggaaaagca gaagaaaatc gacgaataag aagaagagat accaagcaaa agagagcgat 241 ggccagcgag gatgtgcaaa tcaccagcgt catcgatgcc aatggccaga gtttaccgct 301 ccacggcaac agtttgggcg gtccactggg gccgccggtc aagcaggagc gtcccgacga 361 cgccgagatc cgcgagctgg ccgccaagat gaaggagcaa cagaagcaac aggccgccca 421 gcaggcatcc cgccaagcgg ccatgcagca ctcgaacggg ggcactgcct cctccggctc 481 ctcctcctcc gccggtggtg gtggcaacat gcagccaccg atcaccaatg gcaatggcca 541 gacgaacatc atgagctacc tgtcccgcca ccagaagcta cccaatggca ccatgcaggt 601 ggtgcccgcc ttgtcatcca atggtcagca acgcgccaac ggcaatgact cctcctccgc 661 cgcggacaag aagtcctcgg gtccctgcga cgaggagtcc atcatgggcc actttggctg 721 ggcccagttc ggcaaggtct cgatccccta catcttccgc cagtcggaga agtactgctc 781 cgtgcggatg atcgaactga agctgctggg caaatatctc aactgcctgc atccggacat 841 ctactcgagt tgcacctgcg tgcgcagcta ctatatcacc gatgccgagg ctcggctctt 901 catcgagatc aatcacaagc actgcgacgg cgagttcgga cgcgatatct tcaatcaaaa 961 ggatctggtt gtgcgcctga gcgatgcctc caagttctat cagttcttgg acatttgcta 1021 tcgcaaactg gtgtcgggca gcaagacgcc atcggagaaa tgcggcttta tacgcatcaa 1081 caaggagtcc gtggtgccct acactgtgcg caacaatcag caggttgtgc cgctcttcta 1141 cttcgagggc gagacggaga atctgaagac caaggcggag ctgctcaacg gctgggatct 1201 ggcctacctg aagttctgct gcaaggtcca gggcattcgc aacgagctct tctccagcga 1261 aaatgtcgct gtcatttcgc tgaccgacat caagagctac ttccccaatg gcaccgagtt 1321 cgaggactac tggcccagca aggtggtcga ctcgaatctc ctgatcggca atcgtgccaa 1381 tgtcaataac tcggtcaact ggacccgcca gccgtcggcg ccgccgccaa aggtcacgaa 1441 taccggctcc ggatcttcga gtggcggatc caactcctcc tcctcgggcg gcaacatggg 1501 ccagaactca tcttcgtcct catcttctgc ctcgaattca gcgggcggcg gcggtggcca 1561 acaggtgacc tcaaagtcgc aacagcagca gcaacatgcc tccgctgctg cggcagctgc 1621 cacggcggcg cagcagcaac acctgatgaa gcaacgcgcc gccgcagcag cagccgctgc 1681 cggcgccaat ggggtggcca atgcggccaa tagttttgga gcagccgccg tggctgcctt 1741 caattcccag gcggcggcgg ccgcctcgat gctgcagcaa tcgcaggcgg gcaacaaccg 1801 gatgctgtcg caggccaccg tccaggcctt ggccagcagc ggctggatgt ccgggcagag 1861 caacctgcag ctccacgccc agatgatggc ccagcaaacg catgcgaatg caaatcgcgt 1921 gggaagctac cgggagcaca tgaacaacct gatgatgagc ggcagcagtc ggcagccgta 1981 ttcctacaac aatcccgcga tctccatgtc ctcggtgaac aaccacagcg ggggtggcgg 2041 gaatgcccca cctcccctcg ttcgctcggc ggcgggccag aatgccaacc acatgtcaaa 2101 tgtcgagcag tcactggtgc aacaacaaca gcaacagaca caacaacaac cgcaacaaca 2161 acgacaccag aacagcacat ttaacaacaa caacaaccag aacaacaacc atgcaacaca 2221 gcaacaacaa caacactctt caccaaacaa ccagaacaat aatagccacc accatcagca 2281 acaattagcc aaaagtctca gcagcaacag gagcaacatg caacacagca acatgagcaa 2341 caggagcagc agcaatagca gcaacaacaa ctccaattca gcggctgctg tggccgctgc 2401 agctgctgga tatgttcaag cgcttttggg aggcggtaca ggaggaggcg gaggcggagg 2461 agcagggggc gtggctaccg gcgctggcgc tggcaacaac aacagcaatg ccttcaacta 2521 caacctgccc tccacgcgag ccgattacac caatctcgct ctgtggaatc aactgacacc 2581 cgcccaacgt ttgctcttca gtcagcaact caagggagtc acaacatcgc cggtttctaa 2641 tcccagctcc tccagtcatc atcatcccac cagcgtcgtc ggcaagcaga actttccagc 2701 cctgccctcg ctgcccctcg atacggattt gatcaccatg ctggactata ataatcccaa 2761 taaggcgaat aaaagtcaga agagcggaaa tgtgaccttt accaagccca tagtgccgcc 2821 actgatacca gatggttcgg gagcggaaat aacgcttacg aagagtcgga gaaatggagg 2881 ttccgatgga ggagctgttg cacccactag tggcaccacc atacccctaa attccacgca 2941 ggctctcgaa gactttgaaa agaagttcac cgtgatgacg gatgaaatgc gagcggttat 3001 acaaaaggtt ctggccaatc cggatctatc gactttcata caaacgaatt ccggcagcaa 3061 taataatagt aataataatc acctggtgcc ttcctacata tcgccaccca tgtcgccatc 3121 ggtggtgggc atgaacatgg gcatggccat gggaaatgtg gcggccactc tgacattggc 3181 ctccaatccc aatgtgacga taacaccgca gttgccggga cattttctgc attcaccatc 3241 gagttcgtgt tccagttcga gtgcctcgaa tacggcggct tcgccattgg gcagtggcgg 3301 cggaggtgga agtggatcaa atggaggggg ggccacttca gggggcgtat catcttcgtc 3361 gggtcggcaa aagagcgtga tttgctcgac caaaagcaat aacctgccca tggccatact 3421 ttcgctagct agcaataata attcactggg ggttagctca aattcaaatg caggcggacg 3481 aaggacaaat agtagcaata ataataacag tagttacggt cgtcagacac acagccaaaa 3541 tagtagtaca caaaatagta gcacacatag tagcaccaca gccacaccca ctgacgtaat 3601 cgatctgtcc tcctcccgaa ggtcactagc tgcatccgca gcctatttgc agcagcactc 3661 gtcggcggtg gcgcagcagc agcaacaggc ggcagcggcc caggtggtgg cccagcatca 3721 gcgtctggcc gccgccgcag cccatcatgc ccagcatgcc cagcagaatg gtcgtggcgg 3781 tggtggcagt tcctccggta actctggcaa ctctggcggg agtaacgcga attcttcagg 3841 cagcaacgcg aattcttcag gcagcaacaa tggaacgagc ggaacgggcg gtggatcgac 3901 gggaaataac ggtagttcca actcgaacag cgcctccatg cacctgcaac gccatgcggc 3961 actcgtggcg gcggccacgg cggcggacag tgcccagcgg ttgtgcgtca tacccgaaat 4021 acccaccaac aacatgaacc tcacgccgta caaggtgcag aaggtgtgcg tcgacaagca 4081 tctggtgccc tgcatcaaca tgaaggccta caacgactcc gagcagctga tgaccctcat 4141 cgagttccag aagaacttct tcccctcggt gccgctggac cactgcaagc ggctcatcga 4201 ggccctcggt gtggagctct acaaggcgaa tcggcgacag gtgcaaatcc tgatggagta 4261 cgaccgcagc tacaacgaga acatgccgct ggtgcaggtg cgcgacataa tcaagtacat 4321 gacgcagctg accttcatga cgcgccagcc ggagcagccg ccggcgaaga ggacgcgcac 4381 gagctaggaa ttaagctggg gagcacaaca tttgccacca acaacaagca caacagtaac 4441 agcagcagcc acaataccaa ccacacagac agcaacaaat agcagcaata acaccacagc 4501 aacagttcac acaagatcaa cagcagcagc ggcaggcatt ccgctgagga gacgagccct 4561 cacaccgccg gcaaatggtg aagtgctgac caggcggagg gcgctggcac caccgccagc 4621 tccaccagtt cctgccacgc cacccggaac cgcaggatct ccggccacac ctgccacaca 4681 caacagcaac acatacgaaa tgttgtactc ccacaaccac acacaatcgc accactcgca 4741 ccacccaaca gctgccgctc agcagcacca ccagcagcag catgagcagc agcgtctgct 4801 gaagaagcgg caacatgccg agcagacggc cgccaagaat ccccgccaaa agatggccga 4861 agtggagcat gcctacctat cgaatctgta tggcaaggcg gcggccagca tgctgagtcc 4921 accgctgggc aatgtccagc ccgaatggga gcagcagagg cagctaagaa ggaatcaggc 4981 ggcagcacaa caacagcagc agccgcagca gcaacagacg gtggcgccgc cgccgcagca 5041 gcgacatata atgcatcgca ggcatagcgt ttgtgccgcc ggattggcca gcctttcgcc 5101 cgcctcctcg acgcactcct cctcgacggc ttcgccgacg gcggccgcag ctgccctggc 5161 tgccgcctcc tattacggca gtgcggcggc agcagcggcg gcagcattta cggcaccata 5221 tcaacaccat catcatcatc atgcagcagc ggcggcggct gctgcggcgg cccatcatca 5281 tcatcatcat catgcggcag cagcagcagc ggcggcggca gcggcggcag ctgcagcggc 5341 ggcccatcat acccatggcc agccatcgcc caccatttat ccgcccactc cgccgccatc 5401 ggcgccgtgg gtgcatccct ggtatgccgg cgatgcggcc ttctgagcga gagatcatcg 5461 tagatagagc atagatccta gagagatcca gatttagatc cccaggggcg agcaactcaa 5521 gccccacact gtacattcga gtttctagtt tgttaagcta tttattaaaa aggacaaaag 5581 agaaaaaaaa ctaaaaaaac aaatagaaaa acctagaggg aagacgaaaa acacacattt 5641 tttttgcgct cgtgtctgga gaagattagg ttgtaagtag gctaactaaa acaatttctg 5701 ggcattatat gtcaactaac caataataat cgatgatata tatatatata tggactaggg 5761 ctgctgggat ttcgtttggt caaaacataa aaacagcaac agctaaagca acaaacattt 5821 ttaactgaga actcaaagaa ctgattacat attattatca aaacacacac agattcgttt 5881 gattcgtttg gaatatctga tttcgaaagt ctttttctag aaatatttat atagagatat 5941 gctatacata tgtaatatat agataaagag ccaataaact cgtcgtattg taagcaagaa 6001 attaaatttc ttgcgtttca aaactatgca aaacaaaaaa agaactaaag acgcgaacta 6061 aacgaaggca gcgcaaacta ttcaaaaagt gagtcaaatt ttgtaagcta gcagaagaaa 6121 ttccatttaa tattctcatt atcgtcgtct catcaatgtc agaataatat catcagaaaa 6181 gttccccatt cgagcagcga agcataaatc ctaagcaact gtataattta acaatttcca 6241 aatcttacaa gtaacattaa aagctacaac taaaaattaa aaaagaaaaa acaaaatgat 6301 aagctgagag gaagaaaaaa aacacacaaa caaaaacaaa aaccagaaaa ctatgttaaa 6361 aacatacaaa aaagaaaaca ttaaaattaa aaaatacaaa aaggaatgaa aaggaaaaca 6421 ttatgttata tacagtgtat gtatatcgaa aaatatatat gtatgtgtat gaaatacttg 6481 aatatccgtt ttatggattt aagaaccttt ttttttccta gttatagtta tttttttgta 6541 ttggcgaagc gtaaggatat ttatttaata ctatgttgct agtgttgcac ttataatttc 6601 tccttttcct ttgctcttgt cactcatttt aatccatcta tagttcagtg ctgttattaa 6661 gttatcttgg gcaattgttt aaaggaattg taattttaag tcacacacct acacacacac 6721 acacagacag agagagagaa ctaagtaaaa ttatgattat gaactttatt attgttaggt 6781 ttaaaagccg tcaaagtatt tatcaaagtg tgttttcatt tttgacagtg cagcaaaaaa 6841 ctaaaagcat aacggaaaat aaagaaatga agcaaaacta aacagaatca a