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PREDICTED: Drosophila takahashii hemipterous (hep), transcript


LOCUS       XM_070218979            3746 bp    mRNA    linear   INV 09-DEC-2024
            variant X4, mRNA.
ACCESSION   XM_070218979
VERSION     XM_070218979.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3746
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..3746
                     /gene="hep"
                     /note="hemipterous; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:108068245"
     CDS             438..2429
                     /gene="hep"
                     /codon_start=1
                     /product="dual specificity mitogen-activated protein
                     kinase kinase hemipterous isoform X4"
                     /protein_id="XP_070075080.1"
                     /db_xref="GeneID:108068245"
                     /translation="MAQSPTNPQKTIKPTQIPSYQQQQQSQYFMQSATQLPQTTTPTA
                     TTNCFGGSGNGRGNGNGSGSGSSSSASPLSPPSGGGGVGDLNRLYRKSPFMQRKLSNG
                     SHHPHYKYNDESPKKESMFSSIGQSILRNLTTSPFSQKKHNSAAATAITIPLPHNNQT
                     TLFTDAATATANAIATATATTPPNIAAAAAAAAPTTTPTATPTWRLPADNSQAYDSCD
                     SSSNATTTLNLALSSPSPSLPRKQFATESPTLQLASQQQQQQPQRLQPGNQSPIVLQR
                     FYHQQNQLREKEAAERYQQQRQQPQTIGVTSTNPFHSNYVPPPPSTHSTSSQSSTQST
                     CSQIAVNPASLSPSTGSGGDAAAGHFGAGGNGEPLQYQPLPIAAEATATSPTLLPRSP
                     DPQQSDYGAGGSSMVASKLSKLYARRQLLGQSSSSGASSSSLDGCSREQHDAGWFNTL
                     AGAMKRQFATYVKTQLNSTATSPVAASAASASMDRDQEPVHPQPPAYRSIVSNNGSGG
                     KSYYYRTLSAASSSSNTSQSTSPTTEPLPGGGTSSFLRRYASSGPGMTSSGGGGSIST
                     PPSPHILAGLDRRHRSPDPPPRYNRGQSPLLLRKNLLELSGQPPGSPLLHRRYVSASP
                     PLPPPRRGSESVPGSPQHFRTRIHYTPEPQRRIYRTIDQ"
     polyA_site      3746
                     /gene="hep"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cctaatacca tttcttaaac aataatgaca aacaatgaaa gaaaacaacc aataaaaaaa
       61 cataatctaa caaaaataaa tgcaaacgaa aaagaaaaga agaagacaaa ctataaacga
      121 gaaccaaaca ttaaaaccta tcgacataaa cttaaaacga aacaaaacaa aaacaagagc
      181 attcaagtaa aacttgcaac catcaactct atatacagat atataaacct aaatatatat
      241 attacctata tataaagata atgccaacca aacataacta ctcaaaatac tacaaaatac
      301 tatatataaa aaaaactcct cccaattaaa ataaaattca ggccacggcg actggaagtg
      361 gaggcggttc tggatgcgga tctctcgcag gatcaggatc cgcaggtgga tcaggagcca
      421 tcaaatatgg taggacaatg gcgcagagtc ccacgaatcc gcagaagaca ataaaaccca
      481 ctcagatacc gagttaccag cagcagcagc agtcgcagta tttcatgcaa tcagccacac
      541 aactacctca aacaacaaca ccaacggcaa cgacaaactg ttttggcgga agcggaaacg
      601 ggagaggaaa cggaaatggc agcggtagcg gcagcagcag cagcgccagt cctctatcgc
      661 cacccagcgg aggcggcggc gtcggcgatc tcaaccggct gtatcgcaaa tcgccgttca
      721 tgcagcgaaa gctgagcaac ggatcgcatc atccgcacta caaatacaac gacgagagcc
      781 ccaagaagga gtccatgttc agtagcatcg gtcaatcgat tctacgcaat ctgaccacat
      841 cgcccttcag ccaaaagaaa cacaattcag cagcagcgac tgcaataaca ataccactgc
      901 cgcacaacaa ccaaacaaca ttattcacgg atgccgcaac agcaacagca aacgcaattg
      961 caacagcgac ggcaacaaca ccgccaaata ttgcagctgc agcagcagca gcagcgccca
     1021 cgacaacgcc aacagccacg cccacttggc gcctgccagc ggataattcc caagcctacg
     1081 acagctgtga tagtagtagt aatgcgacca cgaccctcaa cttggcccta tcctcaccct
     1141 cgccctcgtt gccgcgcaag caattcgcca cggaatcgcc aaccctacag ctcgccagtc
     1201 agcagcagca acagcaacca cagcgattgc agccgggcaa tcagagcccc atagtgctgc
     1261 agcgcttcta ccaccagcag aaccagctgc gcgagaagga ggcggccgag cggtatcaac
     1321 agcagcgcca gcagccgcag accatcggag tgaccagcac gaatccgttt cacagcaact
     1381 atgtgccgcc gccgccatcg acgcactcga cctctagtca gtcctccacg cagtcgacgt
     1441 gttcgcagat cgccgtcaat cccgccagcc tgtcaccatc gacgggatca ggaggagatg
     1501 cagcagctgg tcactttgga gccggtggca atggtgagcc gttgcagtac caaccgctgc
     1561 ccattgccgc cgaggcaacg gcgacgagtc ccacgctgct gcccagatcc ccggatcctc
     1621 agcagtcgga ctacggcgct ggcggcagtt ccatggtggc cagcaagctg agcaagctgt
     1681 acgcccgccg gcagcttttg ggccagagtt cgagcagcgg ggcgagcagc agcagcctgg
     1741 atggatgctc ccgcgagcag cacgatgctg gctggttcaa caccctcgcc ggcgccatga
     1801 agcggcagtt tgccacctat gttaaaaccc aattgaattc cacagccacg tcaccggtgg
     1861 cggcgtcggc ggcgtcggcc agcatggatc gggatcagga gccagtgcat ccgcagccgc
     1921 cggcctacag gagcatcgtg agcaacaacg gcagcggcgg caagtcctac tactatcgca
     1981 ccctgtcggc ggccagcagc agcagcaaca ccagccaaag cacttcgccg acgacggaac
     2041 ctctgcctgg tggcggcacc agcagcttcc tgcgacgcta cgctagcagc ggaccaggaa
     2101 tgaccagcag cggcggcggt ggcagcatca gcacgccgcc cagtccgcac atcttggccg
     2161 gattggatcg caggcaccgc agtccggatc caccgccgcg ctacaatcgc ggacaatcgc
     2221 cgctgctgct gcgcaagaat ctgctggagc tgagtggcca gcctcctggc tcgccgcttc
     2281 tgcacagaag atatgtttcg gcctcgccac cgctgccgcc gccgcgtcgg ggatccgaaa
     2341 gcgtgccggg atcgccgcag cacttccgca cccgcatcca ctacacaccc gagccccaga
     2401 gacgcatcta ccgcacaata gatcaatgag tggcgctgca aatcatggtc atgtgatgct
     2461 ggtacggctt cgacgacgat gccgccggtg ccgctgatca tccggagggg gcagagctgc
     2521 tggagcccat ctccctgccc gccgtcgcgg cgtcagcggc cggcgactcg ctgtcgatgc
     2581 cggcatatgc cgatccgact gggatgaacc ggcgcatcgg ttgcggtatc ggtcgtcgga
     2641 cgtgctcggc cagcggatcg tatgccagct tgtattcgga taggaatgaa tggccaggag
     2701 gatctggatc aggaccagga tcaggatctc gatctgaagc tgcagctggt gcggcgggag
     2761 catcgacgac gatcagagct gaatacccgt ggacatgtga ttgatgacaa acgaaagtgt
     2821 tcaaaagtct tatacgtgtt taagtgcttg agccaggcaa tctgctaagc aatcagattc
     2881 gttgcgcagc tccaaattgt acatagacat atatatatct gggaggatct atatagacac
     2941 atccgatact agtgcaatag ttgaaagcaa ttctgttcga agccccctgt atccaaatct
     3001 attccctctt atatacatat atctctttat ctgtgtctgt atctccttca atggtaactc
     3061 tgtaactctg taatcaaaag tttacacttt acacaacgta aattatttaa ccgtagctct
     3121 aaagaacaac aacaaaatag ctaaatcgat gatatatggc gaaaatccaa tccataatcc
     3181 aacagaaagt ataaaggaaa gaaattcaaa tgatttgtag ctttgtatat agagaagaga
     3241 ggaggcgaag tgcaaagagt cgttgcattt gcttttgctg tttgcaattt gttttagttt
     3301 atacatttca ttaaacatca acttgtatgc tgagtggaag ggaaaccaac aacaacaaca
     3361 acaaaaacaa acaaacaaca ttaacaatgg aattattgta ctgattatta taattgttta
     3421 atttattatg taagcggcaa caagcaacaa ttcaaattca attttcgttt tgtttttcat
     3481 ttaaaaaggg gtggaaagga ttggttattt cttcgagaat ataagcaagt ctgaagataa
     3541 aaactgctca gattaacgga acaattggaa ttgcttatgt acggggaata aagaaagcca
     3601 ttcgagtttt tcgagatatt ttagaacagc ttcaggtgct gaaacccaaa ggcccgaaac
     3661 catttcttct agttcttagc ttccaccctt ccagttaaaa gaaataaaaa taaaaacaaa
     3721 acaataaatc attataccga aaccag