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LOCUS XM_070218937 1467 bp mRNA linear INV 09-DEC-2024 (Pp1-13C), transcript variant X3, mRNA. ACCESSION XM_070218937 VERSION XM_070218937.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1467 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1467 /gene="Pp1-13C" /note="Protein phosphatase 1 at 13C; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins" /db_xref="GeneID:108054085" CDS 331..1239 /gene="Pp1-13C" /codon_start=1 /product="serine/threonine-protein phosphatase alpha-3 isoform" /protein_id="XP_070075038.1" /db_xref="GeneID:108054085" /translation="MAEVLNLDSIISRLLEVRGARPGKNVQLSEGEIRGLCLKSREIL LAQPILLELEAPLKICGDIHGQYYDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETI CLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVV AIVDEKIFCCHGGLSPDLTSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTIGWGEND RGVSFTFGAEVVGKFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDN AGAMMSVDDTLMCSFQILKPVEKRKK" misc_feature 346..1218 /gene="Pp1-13C" /note="PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain; Region: MPP_PP1_PPKL; cd07414" /db_xref="CDD:277359" misc_feature order(514..516,520..522,598..600,610..612,694..699, 709..714,724..726,841..843,907..915,940..942,982..990, 1066..1068,1138..1152) /gene="Pp1-13C" /note="active site" /db_xref="CDD:277359" misc_feature order(514..516,520..522,598..600,694..696,841..843, 1066..1068) /gene="Pp1-13C" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:277359" misc_feature order(610..612,709..714,724..726,907..915,940..942, 982..990,1138..1152) /gene="Pp1-13C" /note="natural toxin binding site [chemical binding]; other site" /db_xref="CDD:277359" misc_feature order(859..861,865..867,916..918,931..933,970..972, 997..999,1021..1026,1030..1038,1042..1050,1093..1095, 1105..1107,1186..1191,1195..1197,1201..1203,1207..1209) /gene="Pp1-13C" /note="MYPT1 binding site [polypeptide binding]; other site" /db_xref="CDD:277359" ORIGIN 1 tttgatagaa gccaaaaagc aaagcgagaa catattcata aaataaaaca aggcgacaac 61 aacgcagcta gtaaattgaa aaaaaaaatc agaaaaataa aaataaaaat caacgcggag 121 aaaacgaaga agtgaaagca cgctgtacaa aatagtagta aatcaagtgt ataagaatat 181 cgattcaata ccggtttgag gcctccagtt cccgtcaatt tatccggact atcagggtga 241 gtccctgatc cccaatcagc accaacggcg tcccaggcgg ttggcagatc cggcccggac 301 aacgtagccg cggctcgcaa gaccgacgga atggcggagg ttctcaatct ggacagcatc 361 atttcccgcc tcctggaggt gcgtggcgcc cgaccgggca agaatgtcca gttgtccgag 421 ggtgagatac gcgggttgtg ccttaaatcc cgtgagatcc tgctggccca acctatatta 481 cttgaacttg aggccccgct caagatttgc ggcgacatcc atggccagta ctatgatcta 541 ttgcgcctct tcgagtacgg cggctatccg cccgaatcca actatctgtt cctgggcgac 601 tatgtcgata ggggcaaaca gtcgctggaa accatctgcc tgctgttggc ctacaagatc 661 aagtactcgg agaatttctt cctgctccgc ggcaatcacg aatgcgccag catcaatagg 721 atctatggat tctacgatga gtgcaagcgc cggtatacga tcaagttgtg gaagaccttc 781 accgattgct tcaactgcct gcccgtggtg gcgattgtcg atgagaagat cttctgctgc 841 cacgggggct tgtcaccgga tctgacctcc atggagcaga tacgccgcat aatgcgaccc 901 accgatgtgc cggatcaggg actcctgtgc gacctccttt ggtccgatcc cgacaaggac 961 accattggct ggggtgaaaa cgatcgcggc gtgagcttca cctttggcgc cgaggtggtg 1021 ggcaagtttc tgcagaaaca tgaccttgac ttgatttgtc gcgcccatca ggtggtggag 1081 gatggctatg agttcttcgc caaacgccaa ctggtcacac ttttctcggc gcccaactat 1141 tgcggcgaat tcgataatgc cggggccatg atgtccgtgg acgatacgct aatgtgctcc 1201 ttccagatcc taaagcccgt ggagaagcgc aaaaagtaga agatctcaag aaaaatcgaa 1261 ccccaagaac atatatcacg aaacatagac aacacaaaac aaatccccgt cccacactct 1321 cactcgaaaa caaagaaaac gaatgcctat catgattact atgtcgtcaa ctggatctaa 1381 gaacacgccc cgacctcaac atggatcgca aatggaatgt actgatgatt ttaatccgca 1441 ctttggttgt gtataaagaa ttctaac